BLASTX nr result

ID: Cimicifuga21_contig00006608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006608
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298225.1| predicted protein [Populus trichocarpa] gi|2...   183   4e-44
gb|ABK95860.1| unknown [Populus trichocarpa]                          179   5e-43
ref|XP_002303292.1| predicted protein [Populus trichocarpa] gi|2...   175   1e-41
gb|AFK36731.1| unknown [Lotus japonicus]                              172   8e-41
ref|XP_002516019.1| Thylakoid membrane phosphoprotein 14 kDa, ch...   164   1e-38

>ref|XP_002298225.1| predicted protein [Populus trichocarpa] gi|222845483|gb|EEE83030.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  183 bits (464), Expect = 4e-44
 Identities = 95/146 (65%), Positives = 111/146 (76%), Gaps = 2/146 (1%)
 Frame = +2

Query: 68  MASTTIGLLSPRVLIHGSKTHFRTLHKLPVSAFWESPRRRTVVAKATGESSE--TSLNIV 241
           MAS    L SP +L+HG +  FRTL KLP+S   E      VV KATGESSE  TSL+IV
Sbjct: 1   MASIYANLPSPPLLVHGKRIPFRTLQKLPLSTIKERQNCVAVVVKATGESSESSTSLSIV 60

Query: 242 KSVQNIWDKSEDRIALVGLGFTGVVALWASTNLIAAIDKVPVVPSALELVGILFTWWFTY 421
           KSVQNIWD SEDR+ LVGLGF  +VA+WAS N+I A+DK+PVVPSALE VGIL++ WF Y
Sbjct: 61  KSVQNIWDDSEDRLPLVGLGFAALVAVWASANVITAVDKLPVVPSALEFVGILYSSWFVY 120

Query: 422 RYLLFKPDREELVGIVKKSISDILGQ 499
           RYLL KP+REEL  I+KKS+ DILGQ
Sbjct: 121 RYLLLKPNREELFQIIKKSVGDILGQ 146


>gb|ABK95860.1| unknown [Populus trichocarpa]
          Length = 146

 Score =  179 bits (454), Expect = 5e-43
 Identities = 93/146 (63%), Positives = 109/146 (74%), Gaps = 2/146 (1%)
 Frame = +2

Query: 68  MASTTIGLLSPRVLIHGSKTHFRTLHKLPVSAFWESPRRRTVVAKATGESSE--TSLNIV 241
           MAS    L SP +L+H  +  FRTL KLP+S   E      V  KATGESSE  TSL+IV
Sbjct: 1   MASIYANLPSPPLLVHSKRIPFRTLQKLPLSTIKERQNCVAVAVKATGESSESSTSLSIV 60

Query: 242 KSVQNIWDKSEDRIALVGLGFTGVVALWASTNLIAAIDKVPVVPSALELVGILFTWWFTY 421
           KSVQNIWD SEDR+ LVGLGF  +VA+WAS N+I A+DK+PVVPSALE VGIL++ WF Y
Sbjct: 61  KSVQNIWDDSEDRLPLVGLGFAALVAVWASANVITAVDKLPVVPSALEFVGILYSSWFVY 120

Query: 422 RYLLFKPDREELVGIVKKSISDILGQ 499
           RYLL KP+REEL  I+KKS+ DILGQ
Sbjct: 121 RYLLLKPNREELFQIIKKSVGDILGQ 146


>ref|XP_002303292.1| predicted protein [Populus trichocarpa] gi|222840724|gb|EEE78271.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  175 bits (443), Expect = 1e-41
 Identities = 91/146 (62%), Positives = 111/146 (76%), Gaps = 2/146 (1%)
 Frame = +2

Query: 68  MASTTIGLLSPRVLIHGSKTHFRTLHKLPVSAFWESPRRRTVVAKATGESSETS--LNIV 241
           MAS T  L SP +L+HG +T   TL  LP+S   +     +VV +ATGESSE+S  L IV
Sbjct: 1   MASITASLPSPPLLVHGKRTLSSTLQTLPLSPIKDRQNCVSVVVRATGESSESSAPLGIV 60

Query: 242 KSVQNIWDKSEDRIALVGLGFTGVVALWASTNLIAAIDKVPVVPSALELVGILFTWWFTY 421
           KSV+NIWD SEDR+ALVGLGF  +VA+W S  LI AIDK+PVVPS LEL+GILF+ WF Y
Sbjct: 61  KSVKNIWDDSEDRLALVGLGFAALVAIWTSAKLILAIDKLPVVPSVLELIGILFSSWFIY 120

Query: 422 RYLLFKPDREELVGIVKKSISDILGQ 499
           RYLLFKP+REEL  I+KKS+++ILGQ
Sbjct: 121 RYLLFKPNREELFQIIKKSVANILGQ 146


>gb|AFK36731.1| unknown [Lotus japonicus]
          Length = 178

 Score =  172 bits (435), Expect = 8e-41
 Identities = 89/152 (58%), Positives = 113/152 (74%), Gaps = 5/152 (3%)
 Frame = +2

Query: 59  QVEMASTTIGLLSPRVLIHGSKTHFRTLHKLPVSAFWESPRRRTVVA---KATGESSE-- 223
           +V+MAS    L  P +L+HG K+H       PVS     P RR ++A   KA+GESSE  
Sbjct: 31  KVQMASIAASL-QPPLLLHGRKSHTGNFPSFPVSLL---PGRRNLIALVVKASGESSESS 86

Query: 224 TSLNIVKSVQNIWDKSEDRIALVGLGFTGVVALWASTNLIAAIDKVPVVPSALELVGILF 403
           TSL +++SVQN+WDK EDR+ L+G GF G+VALWAS NLI A+D++PV+P+ LEL+GILF
Sbjct: 87  TSLTVLQSVQNVWDKPEDRLGLIGFGFAGIVALWASANLITAVDQLPVLPTVLELIGILF 146

Query: 404 TWWFTYRYLLFKPDREELVGIVKKSISDILGQ 499
           + WFTYRYLLFKPDREEL  I+ KS+SDILGQ
Sbjct: 147 SVWFTYRYLLFKPDREELFQILNKSVSDILGQ 178


>ref|XP_002516019.1| Thylakoid membrane phosphoprotein 14 kDa, chloroplast precursor,
           putative [Ricinus communis] gi|223544924|gb|EEF46439.1|
           Thylakoid membrane phosphoprotein 14 kDa, chloroplast
           precursor, putative [Ricinus communis]
          Length = 146

 Score =  164 bits (416), Expect = 1e-38
 Identities = 84/146 (57%), Positives = 106/146 (72%), Gaps = 2/146 (1%)
 Frame = +2

Query: 68  MASTTIGLLSPRVLIHGSKTHFRTLHKLPVSAFWESPRRRTVVAKATGESSETS--LNIV 241
           MAS    L +P +L+    T FRT  K PV    E+  R  VV KA GESSE+S  L+IV
Sbjct: 1   MASIVANLPAPALLVPSRTTLFRTPQKGPVFPLKETQNRVAVVMKAAGESSESSSSLSIV 60

Query: 242 KSVQNIWDKSEDRIALVGLGFTGVVALWASTNLIAAIDKVPVVPSALELVGILFTWWFTY 421
           KSV+N+WD SEDR A+ GLGF  +V +WAS NL++A+DK+P++PS LEL+GIL++ WF Y
Sbjct: 61  KSVKNVWDSSEDRWAIGGLGFAAIVGVWASANLVSAVDKLPLIPSVLELIGILYSSWFIY 120

Query: 422 RYLLFKPDREELVGIVKKSISDILGQ 499
           RYLLFKPDREEL  I+ KS+S ILGQ
Sbjct: 121 RYLLFKPDREELFQIINKSVSSILGQ 146


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