BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006605
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6...   429   e-118
ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6...   427   e-117
emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-b...   426   e-117
gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopers...   419   e-115
ref|XP_002315298.1| light-harvesting complex I protein Lhca1 [Po...   418   e-115

>ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic
           isoform 1 [Vitis vinifera] gi|147800947|emb|CAN75566.1|
           hypothetical protein VITISV_032585 [Vitis vinifera]
          Length = 244

 Score =  429 bits (1102), Expect = e-118
 Identities = 203/245 (82%), Positives = 218/245 (88%)
 Frame = +3

Query: 123 MASNALRSCGVAAVXXXXXXXXXXXXXXXIALPGVSTNGSSRFSMSAEWMPGQPRPPYLD 302
           MAS  LRSCGVAAV               + LP  +  GS+R +MSA+WMPGQPRPPYLD
Sbjct: 1   MASTVLRSCGVAAVAPSLLSSSKSKFATSLPLPNAAA-GSARVTMSADWMPGQPRPPYLD 59

Query: 303 GSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWA 482
           GSAPGDFGFDPL LGEVPENLER+KESELIHCRWAMLAVPG+LVPEALGLGNWVQAQEWA
Sbjct: 60  GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGVLVPEALGLGNWVQAQEWA 119

Query: 483 AIPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSK 662
           AIPGGQATYLGNPVPWG LPTILAIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSK
Sbjct: 120 AIPGGQATYLGNPVPWGNLPTILAIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSK 179

Query: 663 DPKKFEEYKLKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLSDPWHRNIGDIVIP 842
           DP KFEEYK+KEIKNGRLA+LAFVGFCVQQSAYPGTGPLENLA+HL+DPWH NIGD++IP
Sbjct: 180 DPVKFEEYKVKEIKNGRLAILAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDVIIP 239

Query: 843 RSVLP 857
           RS++P
Sbjct: 240 RSIMP 244


>ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
           [Cucumis sativus] gi|449525097|ref|XP_004169556.1|
           PREDICTED: chlorophyll a-b binding protein 6A,
           chloroplastic-like [Cucumis sativus]
          Length = 246

 Score =  427 bits (1099), Expect = e-117
 Identities = 203/246 (82%), Positives = 216/246 (87%), Gaps = 1/246 (0%)
 Frame = +3

Query: 123 MASNALRSCGVAAVXXXXXXXXXXXXXXX-IALPGVSTNGSSRFSMSAEWMPGQPRPPYL 299
           MASN L SCG+A                  + + GV+ N SSRFSMSAEWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60

Query: 300 DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEW 479
           DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWV+AQEW
Sbjct: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 480 AAIPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYS 659
           AA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 660 KDPKKFEEYKLKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLSDPWHRNIGDIVI 839
           KDP+K +EYK+KEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHL+DPWH NIGDI+I
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 840 PRSVLP 857
           PR++ P
Sbjct: 241 PRTISP 246


>emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-binding protein
           [Nicotiana tabacum]
          Length = 245

 Score =  426 bits (1095), Expect = e-117
 Identities = 203/245 (82%), Positives = 216/245 (88%)
 Frame = +3

Query: 123 MASNALRSCGVAAVXXXXXXXXXXXXXXXIALPGVSTNGSSRFSMSAEWMPGQPRPPYLD 302
           MASN L SCG+AAV               + +   + +G+SRFSMSAEWMPGQPRPPYLD
Sbjct: 1   MASNTLMSCGIAAVSPSVLSSSYSKFAVAVPVCVGAVSGNSRFSMSAEWMPGQPRPPYLD 60

Query: 303 GSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWA 482
           GSAPGDFGFDPLGLGEVP NLER+KESELIHCRWAMLAVPGILVPEALGLGNWV+AQEWA
Sbjct: 61  GSAPGDFGFDPLGLGEVPSNLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 120

Query: 483 AIPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSK 662
           AIPGGQATYLG PVPWGTLPTILAIEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYSK
Sbjct: 121 AIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK 180

Query: 663 DPKKFEEYKLKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLSDPWHRNIGDIVIP 842
           DPKKFEE K+KEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHL+DPWH NIGD++I 
Sbjct: 181 DPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVIIL 240

Query: 843 RSVLP 857
           R +LP
Sbjct: 241 RGILP 245


>gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
           gi|225895|prf||1402358A photosystem I protein CAB
          Length = 246

 Score =  419 bits (1077), Expect = e-115
 Identities = 198/245 (80%), Positives = 213/245 (86%)
 Frame = +3

Query: 123 MASNALRSCGVAAVXXXXXXXXXXXXXXXIALPGVSTNGSSRFSMSAEWMPGQPRPPYLD 302
           MASN L SCG+ AV               + +   +TN  SRFSMSA+WMPGQPRP YLD
Sbjct: 1   MASNTLMSCGIPAVCPSFLSSTKSKFAAAMPVSVGATNSMSRFSMSADWMPGQPRPSYLD 60

Query: 303 GSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWA 482
           GSAPGDFGFDPLGLGEVP NLER+KESELIHCRWAMLAVPGI+VPEALGLGNWV+AQEWA
Sbjct: 61  GSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWA 120

Query: 483 AIPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSK 662
           AIPGGQATYLG PVPWGTLPTILAIEFLAIAFVEHQRSMEKD+EKKKYPGGAFDPLGYSK
Sbjct: 121 AIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSK 180

Query: 663 DPKKFEEYKLKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLSDPWHRNIGDIVIP 842
           DP KFEE K+KEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHL+DPWH NIGD++IP
Sbjct: 181 DPAKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVIIP 240

Query: 843 RSVLP 857
           + + P
Sbjct: 241 KGIFP 245


>ref|XP_002315298.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
           gi|118489209|gb|ABK96411.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222864338|gb|EEF01469.1|
           light-harvesting complex I protein Lhca1 [Populus
           trichocarpa]
          Length = 243

 Score =  418 bits (1075), Expect = e-115
 Identities = 200/245 (81%), Positives = 213/245 (86%)
 Frame = +3

Query: 123 MASNALRSCGVAAVXXXXXXXXXXXXXXXIALPGVSTNGSSRFSMSAEWMPGQPRPPYLD 302
           MA+N L SCG+A                 I LP V  NG+SR +MSA WMPGQPRPPYLD
Sbjct: 1   MATNTLMSCGIATAFPSLLSSSKSKFASSIPLPSV--NGTSRVTMSANWMPGQPRPPYLD 58

Query: 303 GSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWA 482
           GSAPGDFGFDPL LGEVPENLER+KESELIHCRWAMLAVPGILVPEALGLGNWV+AQEWA
Sbjct: 59  GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 118

Query: 483 AIPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSK 662
           A PGGQATYLG PVPWGTLP ILAIEF+AIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSK
Sbjct: 119 ATPGGQATYLGQPVPWGTLPIILAIEFVAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSK 178

Query: 663 DPKKFEEYKLKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLSDPWHRNIGDIVIP 842
           DP+KFEEYK+KEIKNGRLALLAFVG CVQQ+AYPGTGPLENLATHL+DPWH NIGD++IP
Sbjct: 179 DPQKFEEYKVKEIKNGRLALLAFVGICVQQTAYPGTGPLENLATHLADPWHNNIGDVLIP 238

Query: 843 RSVLP 857
           RSV P
Sbjct: 239 RSVSP 243