BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006599
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603831.1| Pentatricopeptide repeat-containing protein ...   104   9e-21
emb|CBI18917.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]   103   2e-20
ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18

>ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355492879|gb|AES74082.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 530

 Score =  104 bits (259), Expect = 9e-21
 Identities = 56/127 (44%), Positives = 77/127 (60%)
 Frame = -3

Query: 386 TFRPFSSSPELVSQEDETDNNNSKNDTKLSPTETLLVEKLHSLIXXXXXXXXXXXXXXXX 207
           TFR  SSSP LVS+ D  DNN +  +T LSP +T +V+K H++I                
Sbjct: 23  TFRLCSSSP-LVSEHDTNDNNTTPQNTNLSPEDTHIVDKFHTIIKDHYRKNPNPNAVSPS 81

Query: 206 XXXNLTISALSHAFSRITPIGSISPAIVKQVIEKCGAVRHGIPFLEALSFFNWVTYQSEF 27
               L+I  LS  FS+I+ + S+SP+I ++ IEKC  VRHGIPFL++L+FFNW T    F
Sbjct: 82  LN--LSIPDLSIEFSKISTVYSVSPSITRRAIEKCSGVRHGIPFLQSLAFFNWATTLEGF 139

Query: 26  QRTPQPY 6
             +P+PY
Sbjct: 140 PSSPEPY 146


>emb|CBI18917.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  103 bits (256), Expect = 2e-20
 Identities = 59/129 (45%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
 Frame = -3

Query: 386 TFRPFSSSPELVSQEDET-DNNNSKNDTKLSPTETLLVEKLHSLIXXXXXXXXXXXXXXX 210
           +FR +SSS E   +EDE  ++ NS  +  LS  ETL+VEK HSLI               
Sbjct: 24  SFRLYSSSSEASEEEDEVKESGNSAVNIVLSSEETLVVEKFHSLIKSHQRKNTNPDPISP 83

Query: 209 XXXXNLTISALSHAFSRITPIGSISPAIVKQVIEKCGAVRHGIPFLEALSFFNWVTYQSE 30
                 TI++LS  FS+I+   S+S AIV++VIEKCG VRHGIPF + L+FFNW T   E
Sbjct: 84  NPHY--TIASLSFDFSQISSADSVSSAIVRRVIEKCGGVRHGIPFPQTLAFFNWATNLEE 141

Query: 29  FQRTPQPYI 3
           F  +P+PY+
Sbjct: 142 FGHSPEPYM 150


>ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Vitis vinifera]
          Length = 531

 Score =  103 bits (256), Expect = 2e-20
 Identities = 59/129 (45%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
 Frame = -3

Query: 386 TFRPFSSSPELVSQEDET-DNNNSKNDTKLSPTETLLVEKLHSLIXXXXXXXXXXXXXXX 210
           +FR +SSS E   +EDE  ++ NS  +  LS  ETL+VEK HSLI               
Sbjct: 24  SFRLYSSSSEASEEEDEVKESGNSAVNIVLSSEETLVVEKFHSLIKSHQRKNTNPDPISP 83

Query: 209 XXXXNLTISALSHAFSRITPIGSISPAIVKQVIEKCGAVRHGIPFLEALSFFNWVTYQSE 30
                 TI++LS  FS+I+   S+S AIV++VIEKCG VRHGIPF + L+FFNW T   E
Sbjct: 84  NPHY--TIASLSFDFSQISSADSVSSAIVRRVIEKCGGVRHGIPFPQTLAFFNWATNLEE 141

Query: 29  FQRTPQPYI 3
           F  +P+PY+
Sbjct: 142 FGHSPEPYM 150


>emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
          Length = 1563

 Score =  103 bits (256), Expect = 2e-20
 Identities = 59/129 (45%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
 Frame = -3

Query: 386  TFRPFSSSPELVSQEDET-DNNNSKNDTKLSPTETLLVEKLHSLIXXXXXXXXXXXXXXX 210
            +FR +SSS E   +EDE  ++ NS  +  LS  ETL+VEK HSLI               
Sbjct: 1056 SFRLYSSSSEASEEEDEVKESGNSAVNIVLSSEETLVVEKFHSLIKSHQRKNTNPDPISP 1115

Query: 209  XXXXNLTISALSHAFSRITPIGSISPAIVKQVIEKCGAVRHGIPFLEALSFFNWVTYQSE 30
                  TI++LS  FS+I+   S+S AIV++VIEKCG VRHGIPF + L+FFNW T   E
Sbjct: 1116 NPHY--TIASLSFDFSQISSADSVSSAIVRRVIEKCGGVRHGIPFPQTLAFFNWATNLEE 1173

Query: 29   FQRTPQPYI 3
            F  +P+PY+
Sbjct: 1174 FGHSPEPYM 1182


>ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
           mitochondrial-like [Glycine max]
          Length = 564

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 58/132 (43%), Positives = 72/132 (54%), Gaps = 5/132 (3%)
 Frame = -3

Query: 386 TFRPFSSS-----PELVSQEDETDNNNSKNDTKLSPTETLLVEKLHSLIXXXXXXXXXXX 222
           TF+P+SSS     PEL  Q D   N N      LSP ET L +K H+ I           
Sbjct: 56  TFKPYSSSASALVPELDIQPDTPQNPN------LSPEETTLADKFHAAIKEHHRRNPTPN 109

Query: 221 XXXXXXXXNLTISALSHAFSRITPIGSISPAIVKQVIEKCGAVRHGIPFLEALSFFNWVT 42
                   NLTI  LS AFS I+    ISP++  +VIEKCG VRHGIPFL++L+FFNW +
Sbjct: 110 PNAPPPTPNLTIPDLSLAFSAISAAHPISPSVAHRVIEKCGGVRHGIPFLQSLAFFNWSS 169

Query: 41  YQSEFQRTPQPY 6
               F  +P+PY
Sbjct: 170 SLDGFPASPEPY 181