BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006576
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   127   6e-27
ref|XP_003615612.1| F-box [Medicago truncatula] gi|355516947|gb|...   125   1e-26
ref|XP_003599499.1| F-box protein [Medicago truncatula] gi|35548...   122   2e-25
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   120   6e-25
ref|XP_003594085.1| F-box family protein, partial [Medicago trun...   119   1e-24

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score =  127 bits (318), Expect = 6e-27
 Identities = 99/328 (30%), Positives = 145/328 (44%), Gaps = 23/328 (7%)
 Frame = -2

Query: 917 DLDDTTTKCLPHELVVEILSWLPAKDLWPFRCVCKSWLCLLTDPNFTKLHFDRSIKSNIN 738
           D   T  + LP E+  +ILS LP   L  F+CVC++W  L+ DP    L+   S +   +
Sbjct: 19  DPQTTGMELLPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDTDH 78

Query: 737 PSILAMRFTNESYQSTNSKINPSILGMQTTNVSIAKEKTKFYFAAEYTSCDRAIALVLPF 558
           P ++                          +  I        FAA     ++   +  PF
Sbjct: 79  PCLILH-----------------------CDFPIRNNLYFVDFAAHEEEKEKVKRIPAPF 115

Query: 557 HQGTYRYMVYGICNGLVCLSNSM--DSIYIWNPLTGDHILIPFLSRSLFRDGLHFM--FG 390
                 + V G CNGL+CLS+S+  DS+YI+NP TG +  +P   +SL       +  FG
Sbjct: 116 SSMMPEFEVVGSCNGLLCLSDSLYNDSLYIYNPFTGCYKELP---KSLQYPDQEVVSGFG 172

Query: 389 FHQGTNQYKVIKTTWY----------------LSHFSVYTLGTNSTWRTLEESPQYKTRR 258
           F+  T +YKVI+  +Y                LS   + TLG    WR+L +      RR
Sbjct: 173 FNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPE-WRSLGKVSYRLVRR 231

Query: 257 VSTDNALINGVLHWLAFMTKPLSDVMIVSFDLKDECFQEIPPPDDFKINPLKFKLTIWE- 81
            S   AL+NG LHW++   +      +VSFDL DE F+E+  PD   +N   + L +   
Sbjct: 232 AS--GALVNGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKPDCGGLNRCNYHLVVLRG 289

Query: 80  --LGGLLCLFGTLDGEDVHIWAMKEYGV 3
                + C +G L+     IW MKEY V
Sbjct: 290 CLSAAVYCNYGRLE-----IWVMKEYNV 312


>ref|XP_003615612.1| F-box [Medicago truncatula] gi|355516947|gb|AES98570.1| F-box
           [Medicago truncatula]
          Length = 386

 Score =  125 bits (315), Expect = 1e-26
 Identities = 96/308 (31%), Positives = 146/308 (47%), Gaps = 12/308 (3%)
 Frame = -2

Query: 890 LPHELVVEILSWLPAKDLWPFRCVCKSWLCLLTDPNFTKLHFDRSIKSNINPSILAMRFT 711
           LP EL+++IL  LP K L  F+CVCKSW  L++ P+F   HF  +  ++  P IL   F 
Sbjct: 10  LPIELIIQILLKLPVKSLIRFKCVCKSWFSLISQPHFANSHFQLTANAH-TPRIL---FI 65

Query: 710 NESYQSTNSKINPSILGMQTTNVSIAKEKTKFYFAAEYTSCDRAIALVLPFHQGTYRYMV 531
           N   +S +     S   +   + S + + +  +   +Y S   +       H       +
Sbjct: 66  NPDLESLSIDFETS---LHDDSASYSPDISFLFEEYDYDSSSSSDMDFSSPHPSFLDLDI 122

Query: 530 YGICNGLVCLSNSMDSIYIWNPLTGDHILIPFLS--RSLFRDGLHFMFGFHQGTNQYKVI 357
            G C G + L +   S+Y+WNP TG H  IPF +   S       + FG+ + T+ Y V+
Sbjct: 123 RGSCRGFI-LCSGYSSLYLWNPSTGVHRQIPFTTVIDSNLEAKYFYGFGYDESTDDYLVL 181

Query: 356 KTTW------YLSHFSVYTLGTNSTWRTLE--ESPQYKTR-RVSTDNALINGVLHWLAFM 204
              +       LSH  +++L  N TW+ +E  ++ +Y  +   S  ++L+NGV+HWLAF 
Sbjct: 182 SMCYDPSARGLLSHLGLFSLRAN-TWKEMEGGDNLRYSQQCMYSRVDSLLNGVIHWLAFH 240

Query: 203 TKPLSDVMIVSFDLKDECFQEIPPPDDFKINPLKFKLTIWELGGLLCLFG-TLDGEDVHI 27
                +V IV F L +    E+P P      P  + L  W   G L LF    D   V I
Sbjct: 241 YDRSMNV-IVGFHLTERKLIELPLPIGINNGPRVYDL--WLFRGCLSLFDMCTDNGTVEI 297

Query: 26  WAMKEYGV 3
           W MK+Y V
Sbjct: 298 WVMKKYNV 305


>ref|XP_003599499.1| F-box protein [Medicago truncatula] gi|355488547|gb|AES69750.1| F-box
            protein [Medicago truncatula]
          Length = 489

 Score =  122 bits (306), Expect = 2e-25
 Identities = 99/341 (29%), Positives = 149/341 (43%), Gaps = 23/341 (6%)
 Frame = -2

Query: 956  KKAGFCLSERRNMDLDDTTTKCLPHELVVEILSWLPAKDLWPFRCVCKSWLCLLTDPNFT 777
            K+   C+  R+   ++  T   LPHEL+++I+  LP K L  F+CVCKSWL L++D NF 
Sbjct: 104  KQNNNCIGGRQ---MEKKTDLYLPHELIIQIMLRLPVKSLIRFKCVCKSWLALISDHNFA 160

Query: 776  KLHFDRSIKSNINPSILAMRFTNESYQSTNSKINPSILGMQTTNVSIAKEKTKFYFAAEY 597
            K HF+ S  ++                 TN  +  S L ++T ++        F  +   
Sbjct: 161  KSHFELSPATH-----------------TNRIVFMSTLALETRSID-------FEASLND 196

Query: 596  TSCDRAIALVLPFHQGTYRYMVYGICNGLVCLSNSMDSIYIWNPLTGDHILIPFLSRSLF 417
             S   ++ L     +      +   C G + L+ S  +IY+WNP T  H  IPF   +L 
Sbjct: 197  DSASTSLNLNFMLPESYSNLEIKSSCRGFIVLTCS-SNIYLWNPSTRHHKKIPFPPSNL- 254

Query: 416  RDGLH----FMFGFHQGTNQYKVIKTTW----------YLSHFSVYTLGTNSTWRTLE-- 285
             D  +    + FG+    + Y V+  ++            SH   ++L  N TW  +E  
Sbjct: 255  -DAKYSCCLYGFGYDHSRDDYLVVSVSYDKSIDLIEENISSHLKFFSLRAN-TWNEIECL 312

Query: 284  ------ESPQY-KTRRVSTDNALINGVLHWLAFMTKPLSDVMIVSFDLKDECFQEIPPPD 126
                    P Y       T   L NG +HW +F      DV I++FDL +    E+P PD
Sbjct: 313  GLVKYKHFPYYMNVNDDPTVGTLFNGNIHWFSFRNDLSMDV-IIAFDLVERELLEMPFPD 371

Query: 125  DFKINPLKFKLTIWELGGLLCLFGTLDGEDVHIWAMKEYGV 3
             F   P+   L  W  G  L L+  + G  + IW MKEY V
Sbjct: 372  GFDHEPMDCDL--WIFGEFLSLW-AMGGVTIEIWVMKEYKV 409


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  120 bits (301), Expect = 6e-25
 Identities = 102/316 (32%), Positives = 143/316 (45%), Gaps = 20/316 (6%)
 Frame = -2

Query: 890 LPHELVVEILSWLPAKDLWPFRCVCKSWLCLLTDPNFTKLHFDRSIKSNINPSILAMRFT 711
           LP +++++ILS LP   L  FR VC+ W  +  D      H  R+  +  NP ++     
Sbjct: 30  LPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLCRT--AQYNPCLIL---- 83

Query: 710 NESYQSTNSKINPSILGMQTTNVSIAKEKTKFYFAAEYTSCDRAIALVLPFHQGTYRYMV 531
           +  Y   N          Q + V I+         AE    D    L +PF      + V
Sbjct: 84  HCDYPIRN----------QISFVDIS---------AESRDKDMVRKLTIPFWASMPEFEV 124

Query: 530 YGICNGLVCLSNSM--DSIYIWNPLTGDHILIPFLSRSLFRDGLHFMFGFHQGTNQYKVI 357
            G CNGL+CL++S+  D++Y+ NP T D   +P  S       + F FG+H  T  YKV+
Sbjct: 125 VGSCNGLLCLADSLFKDAVYVHNPFTRDFKQLP-KSLQYPDQEVVFGFGYHPMTEVYKVV 183

Query: 356 KTTWY----------------LSHFSVYTLGTNSTWRTLEESPQYKTRRVSTDNALINGV 225
           K  +Y                 S   V TLG + TWR+L +      R  S   AL+NG 
Sbjct: 184 KVVYYRNGYGGFSRFRRITCSQSEVQVLTLG-SPTWRSLGKVSYQLDRWPS--EALVNGR 240

Query: 224 LHWLAFMTKPLSDV--MIVSFDLKDECFQEIPPPDDFKINPLKFKLTIWELGGLLCLFGT 51
           LHW   +T+P   V   IVSFDL DE F+EIP PD   ++   + L +  LGG L     
Sbjct: 241 LHW---VTRPRRYVTRFIVSFDLADEQFREIPKPDCGGLSRCNYHLLV--LGGCLSAAVH 295

Query: 50  LDGEDVHIWAMKEYGV 3
                + +W MKEY V
Sbjct: 296 RSNGKLEVWVMKEYDV 311


>ref|XP_003594085.1| F-box family protein, partial [Medicago truncatula]
           gi|355483133|gb|AES64336.1| F-box family protein,
           partial [Medicago truncatula]
          Length = 595

 Score =  119 bits (299), Expect = 1e-24
 Identities = 93/308 (30%), Positives = 138/308 (44%), Gaps = 13/308 (4%)
 Frame = -2

Query: 890 LPHELVVEILSWLPAKDLWPFRCVCKSWLCLLTDPNFTKLHFDRSIKSNINPSILAMRFT 711
           L  ++V EILS LP K L   + VCKSW  L++D NF K HF               R +
Sbjct: 108 LTFDIVAEILSRLPVKSLMQLKSVCKSWKYLISDSNFAKNHF---------------RVS 152

Query: 710 NESYQSTNSKINPSILGMQTTNVSIAKEKTKFYFAAEYTSCDRAIALVLPFHQGTYRYMV 531
              +   + K  PS+     ++V             E T     + L  P +  ++   +
Sbjct: 153 TTRHHLVSDKTKPSLNYYPLSSV-----------FTEITPTTTPLQLQFPLNDQSWDRFI 201

Query: 530 YGICNGLVCLSNSMDSIYIWNPLTGDHILIPFLSRSLFRDGL--HFMFGFHQGTNQYKVI 357
            G C G++C S       +WNP       +P L  +  R+GL   + FG+   ++ YKV+
Sbjct: 202 -GSCRGILCFSLGKAPPLVWNPSIQKFTKLPSLGYT-EREGLCRLYGFGYDHVSDTYKVV 259

Query: 356 KTTWYL---SHFS-------VYTLGTNSTWRTLEESPQYKTRRVSTDNALINGVLHWLAF 207
              WY    SH+        ++TLGTNS WR ++  P Y          ++ G ++WL  
Sbjct: 260 VVDWYSDDGSHYGLDKNQTMLHTLGTNS-WRRIQNFP-YTPFGADGSGTVVCGTINWLTS 317

Query: 206 MTKPLSDVMIVSFDLKDECFQE-IPPPDDFKINPLKFKLTIWELGGLLCLFGTLDGEDVH 30
            T   + + IVS DL+ E ++E +PPPD   I  + F L +  L   LCLF   D     
Sbjct: 318 KTWSATSLFIVSLDLEKESYRELLPPPDHRVITVVNFMLGV--LRDCLCLFSN-DPTFTD 374

Query: 29  IWAMKEYG 6
           +W MKEYG
Sbjct: 375 VWLMKEYG 382