BLASTX nr result

ID: Cimicifuga21_contig00006573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006573
         (1828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534293.1| nucleic acid binding protein, putative [Rici...   640   0.0  
ref|XP_002283220.2| PREDICTED: uncharacterized protein LOC100260...   596   e-168
ref|XP_003528998.1| PREDICTED: uncharacterized protein LOC100785...   587   e-165
ref|XP_002285189.1| PREDICTED: uncharacterized protein LOC100262...   585   e-164
ref|XP_002318320.1| predicted protein [Populus trichocarpa] gi|2...   585   e-164

>ref|XP_002534293.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223525559|gb|EEF28090.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 442

 Score =  640 bits (1650), Expect = 0.0
 Identities = 326/436 (74%), Positives = 355/436 (81%), Gaps = 6/436 (1%)
 Frame = +1

Query: 238  MLMNHSSPSVPSEE-FNCLENGSNS-KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI 411
            ML N+SS SVPS E F+CLENGSN+ KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI
Sbjct: 1    MLANNSSSSVPSSEPFSCLENGSNNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI 60

Query: 412  CNQGFQRDQNLQMHRRRHKVPWKLLKRETPEVKKRVFVCPEPSCLHHDPCHALGDLVGIK 591
            CNQGFQRDQNLQMHRRRHKVPWKLLKRETP V+KRVFVCPEPSCLHHDPCHALGDLVGIK
Sbjct: 61   CNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIK 120

Query: 592  KHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDA 771
            KHFRRKHSNHKQWVCEKCSK YAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDA
Sbjct: 121  KHFRRKHSNHKQWVCEKCSKAYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDA 180

Query: 772  CNAGRIRP--PDIQTMQP-ACLSRTAXXXXXXXDTNFSTAPWPGMRVTKST-TENVFVNN 939
            CN GR+RP      T+QP ACLSRTA       D NFSTAPWP + + + T T+ +F+ +
Sbjct: 181  CNMGRLRPDRQSQSTLQPAACLSRTASSPSPSTDNNFSTAPWPPLLIARPTSTDAIFLVS 240

Query: 940  PSTNDHRHXXXXXXXXXXXXXXXASVSRNTDENHATQLQLSIGSCDHGEKNEGSKNKVNN 1119
            P+T D +                 S+S   D+NH+TQLQLSIGS D  EKNE      N 
Sbjct: 241  PTTIDKKDYNLDLQLSSTSNPLVLSISPKRDDNHSTQLQLSIGSSDLSEKNESHIASTNK 300

Query: 1120 DAGKRSPNNKNTSEESMSIASRMKEQAQEQLKLAMAEKAFAEEARQQAKRQIELAEQEFA 1299
            DAGK SP   N SE+  S A R+KEQA+EQL+LAMAEKA+AEEARQ+AKRQIELAEQEFA
Sbjct: 301  DAGKLSPRESNNSEKPESAALRLKEQAREQLRLAMAEKAYAEEARQRAKRQIELAEQEFA 360

Query: 1300 NAKRIRQQAQAELDKAQMLKEHATKQINSTILQITCHACKQQFQAISSSTTPPDENSLVA 1479
            NAKRIRQQAQAE DKAQ L+EHA KQINST+LQ+TCHACKQQFQ    + TPPDENSLV 
Sbjct: 361  NAKRIRQQAQAEFDKAQALREHAMKQINSTLLQVTCHACKQQFQ----TRTPPDENSLVL 416

Query: 1480 SYMSSAVTEGEGENDN 1527
            S+MSSAVTEGE ENDN
Sbjct: 417  SHMSSAVTEGEVENDN 432


>ref|XP_002283220.2| PREDICTED: uncharacterized protein LOC100260988 [Vitis vinifera]
          Length = 455

 Score =  596 bits (1536), Expect = e-168
 Identities = 307/434 (70%), Positives = 341/434 (78%), Gaps = 13/434 (2%)
 Frame = +1

Query: 271  SEEFNCLENGSNSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQM 450
            +E F  LENGSNSKRKRRPAGTPDPDAEVVSLSPKTLLESDRY+CEICNQGFQRDQNLQM
Sbjct: 15   AEPFASLENGSNSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYICEICNQGFQRDQNLQM 74

Query: 451  HRRRHKVPWKLLKRETPEVKKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQW 630
            HRRRHKVPWKLLKRETP V+KRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQW
Sbjct: 75   HRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQW 134

Query: 631  VCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNAGRIRPPDIQT 810
            VCEKC+KGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACN G +R P+ Q 
Sbjct: 135  VCEKCNKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGHLR-PESQL 193

Query: 811  MQP-ACLSRTAXXXXXXXDTNFSTAPWPGMRVTKSTTENVFV--------NNPSTNDHRH 963
            +QP ACLSRTA       +TNFS  PW G+ +T    +++F+        NNP    H H
Sbjct: 194  LQPAACLSRTASSPSPSSETNFSVPPWSGL-MTPRPVDSIFLTSDGDNNNNNPPKKAHYH 252

Query: 964  XXXXXXXXXXXXXXXASVSRNTDENHATQLQLSIGSCDHGEKNEGS-KNKVNND--AGKR 1134
                           A  S   DENH+TQLQLSIGS D  EKNE S  N +N +  A  R
Sbjct: 253  -NLELQLLTTPNPLVALASPKADENHSTQLQLSIGSSDFNEKNESSIINLINKEYSAPAR 311

Query: 1135 SPNNKNTSEESMSIASRMKEQAQEQLKLAMAEKAFAEEARQQAKRQIELAEQEFANAKRI 1314
             P   NTSE++   A+R+KE+A+EQL+LAM EK +AEEARQQAKRQIELA++EF +AKRI
Sbjct: 312  CPRECNTSEKATFGAARLKEEAREQLRLAMEEKVYAEEARQQAKRQIELADKEFTHAKRI 371

Query: 1315 RQQAQAELDKAQMLKEHATKQINSTILQITCHACKQQFQA-ISSSTTPPDENSLVASYMS 1491
            RQQAQAELDKAQ LKEHA KQINSTILQITCHACKQQF+   + +  PPDENSLV SYMS
Sbjct: 372  RQQAQAELDKAQALKEHARKQINSTILQITCHACKQQFRTRTAGNVAPPDENSLVLSYMS 431

Query: 1492 SAVTEGEGENDNRN 1533
            SA+TEGE   +N +
Sbjct: 432  SAITEGEVVENNHH 445


>ref|XP_003528998.1| PREDICTED: uncharacterized protein LOC100785333 [Glycine max]
          Length = 483

 Score =  587 bits (1514), Expect = e-165
 Identities = 311/473 (65%), Positives = 354/473 (74%), Gaps = 43/473 (9%)
 Frame = +1

Query: 238  MLMNHSSPS-VP-SEEFNCLENGS-NSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 408
            ML N+ SPS VP SE F C ENG+  +KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE
Sbjct: 1    MLANNLSPSSVPTSEPFPCTENGTATNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60

Query: 409  ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPEVKKRVFVCPEPSCLHHDPCHALGDLVGI 588
            ICNQGFQRDQNLQMHRRRHKVPWKLLKRETP V+KRVFVCPEP+CLHHDPCHALGDLVGI
Sbjct: 61   ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGI 120

Query: 589  KKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD 768
            KKHFRRKHSNHKQWVCE+CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD
Sbjct: 121  KKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD 180

Query: 769  ACNAGRIRPPDIQTMQP-ACLSRTAXXXXXXXDTNFSTAPWPGMRVTK--STTENVFVNN 939
            ACN GR+RP + Q +QP ACLSRTA       +TNFSTAPWP   + +  S T  +F+NN
Sbjct: 181  ACNMGRLRPHESQPLQPSACLSRTASSPSPSSETNFSTAPWPTRMIIQKPSETPTIFMNN 240

Query: 940  PST-----------------------------NDHRHXXXXXXXXXXXXXXXASVSRNTD 1032
            P T                             N++ +               A++S   D
Sbjct: 241  PITAITTAETSSKSNNKLLHPNLDLQLSTPTNNNNSNTSNTNTSNIANPIDNAAISAKRD 300

Query: 1033 ---ENHATQLQLSIGSCDHGEKNEGSKNKVNNDAGKRSP--NNKNTSEESMSIA-SRMKE 1194
               ENH+T LQLSIGS D  EKN+ S    +  +   S   N++N  ++S ++A  R++E
Sbjct: 301  HYHENHSTHLQLSIGSSDMSEKNDQSNRNSSEKSSNNSNNINDQNNKQQSNNMALLRVQE 360

Query: 1195 QAQEQLKLAMAEKAFAEEARQQAKRQIELAEQEFANAKRIRQQAQAELDKAQMLKEHATK 1374
            QA+E L++AMAEKA+AEEAR+QAKRQIELAEQEF NAKRIRQQAQ ELDKA  LKEHA K
Sbjct: 361  QAREHLRIAMAEKAYAEEARKQAKRQIELAEQEFTNAKRIRQQAQVELDKAYALKEHAMK 420

Query: 1375 QINSTILQITCHACKQQFQAISSSTTPPDENSLVASYMSSAVTE--GEGENDN 1527
            QINST+LQITCH CKQQFQA +++TT PD+NSLV SY+SSA+T   GE ENDN
Sbjct: 421  QINSTMLQITCHFCKQQFQARNATTTSPDDNSLVLSYVSSAITTEGGEVENDN 473


>ref|XP_002285189.1| PREDICTED: uncharacterized protein LOC100262958 [Vitis vinifera]
            gi|147787378|emb|CAN60092.1| hypothetical protein
            VITISV_033421 [Vitis vinifera]
          Length = 425

 Score =  585 bits (1509), Expect = e-164
 Identities = 303/426 (71%), Positives = 339/426 (79%), Gaps = 4/426 (0%)
 Frame = +1

Query: 253  SSPSVPSEEFNCLENGSNSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQR 432
            ++PS  S+ F  LENG  +KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQR
Sbjct: 10   TAPSSSSDAFTSLENGVCNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQR 69

Query: 433  DQNLQMHRRRHKVPWKLLKRETPEVKKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKH 612
            DQNLQMHRRRHKVPWKLLKRET EVKKRVFVCPEPSCLHHDP HALGDLVGIKKHFRRKH
Sbjct: 70   DQNLQMHRRRHKVPWKLLKRETQEVKKRVFVCPEPSCLHHDPLHALGDLVGIKKHFRRKH 129

Query: 613  SNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNAGRIR 792
            SNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC   ++R
Sbjct: 130  SNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACAVRQVR 189

Query: 793  PPDIQTMQPACLSRTAXXXXXXXDTNFSTAPWPGMRVTKSTTENVFV----NNPSTNDHR 960
             P++QT+QPAC SRTA       D NFS    PG+ + K   E VF+    NNPS +D +
Sbjct: 190  -PELQTLQPACSSRTASSTSPSSDNNFSRVQLPGLTLPK-PAETVFLCLERNNPSPSDLQ 247

Query: 961  HXXXXXXXXXXXXXXXASVSRNTDENHATQLQLSIGSCDHGEKNEGSKNKVNNDAGKRSP 1140
            H                  SRN+DENHAT L+LSIGSC+ GE NE      + DA + SP
Sbjct: 248  HNLELRLLPSPNTYS----SRNSDENHATHLKLSIGSCNSGEMNE--PRCASGDASRSSP 301

Query: 1141 NNKNTSEESMSIASRMKEQAQEQLKLAMAEKAFAEEARQQAKRQIELAEQEFANAKRIRQ 1320
               NT+E +++ ASR+KE A EQLKLAMAEKA AEEAR++AKRQIELAE EFANA+RIRQ
Sbjct: 302  REMNTAEPALA-ASRLKELASEQLKLAMAEKASAEEARREAKRQIELAELEFANARRIRQ 360

Query: 1321 QAQAELDKAQMLKEHATKQINSTILQITCHACKQQFQAISSSTTPPDENSLVASYMSSAV 1500
            QAQAEL+KAQ+LKE A K+++STILQITCHACK QFQA +++  P DE SL  SYMSSA+
Sbjct: 361  QAQAELEKAQILKEQAIKKVSSTILQITCHACKHQFQA-TAAGAPSDETSLAMSYMSSAL 419

Query: 1501 TEGEGE 1518
            TEGEGE
Sbjct: 420  TEGEGE 425


>ref|XP_002318320.1| predicted protein [Populus trichocarpa] gi|222858993|gb|EEE96540.1|
            predicted protein [Populus trichocarpa]
          Length = 456

 Score =  585 bits (1508), Expect = e-164
 Identities = 314/451 (69%), Positives = 346/451 (76%), Gaps = 21/451 (4%)
 Frame = +1

Query: 238  MLMNHS-SPSVP--SEEFNCLENGSN-SKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC 405
            ML N+S S S+P  SE F+CLENG+N +KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC
Sbjct: 1    MLANNSLSSSLPCNSEPFSCLENGNNINKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC 60

Query: 406  EICNQGFQRDQNLQMHRRRHKVPWKLLKRETPEVKKRVFVCPEPSCLHHDPCHALGDLVG 585
            EICNQGFQRDQNLQMHRRRHKVPWKLLKRETP V+KRVFVCPEPSCLHHDPCHALGDLVG
Sbjct: 61   EICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVG 120

Query: 586  IKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ 765
            IKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ
Sbjct: 121  IKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ 180

Query: 766  DACNAGRIRPPDIQTMQP-ACLSRTAXXXXXXXDTNFSTAPWPGMRVTKSTTEN-VFVNN 939
            DACN G +R  + Q++QP ACLSRTA       DTNFSTAPW  + + ++T ++ +F   
Sbjct: 181  DACNMGNLR-SESQSLQPAACLSRTASSPSPSSDTNFSTAPWLPLIIPRTTPDHAMFFIT 239

Query: 940  PSTND-------------HRHXXXXXXXXXXXXXXXASVSRNTDENHATQLQLSIGSCDH 1080
            P+T               H H                SVS   ++NH+TQLQLSIGS D 
Sbjct: 240  PTTTSSVVDKSDSSKSAAHYHNLELQLSTASGNPLEISVSPKREDNHSTQLQLSIGSSDV 299

Query: 1081 GEKNEGSKNKVNNDAGKRSP-NNKNTSEESMSIASRMKEQA-QEQLKLAMAEKAFAEEAR 1254
             ++NE + +  + D GK SP  N N S      ASR+KEQ  +EQL +AMAEK  AEEAR
Sbjct: 300  SDRNESNISYTDKDHGKSSPRENNNGSPRPELGASRLKEQVIREQLMMAMAEKIHAEEAR 359

Query: 1255 QQAKRQIELAEQEFANAKRIRQQAQAELDKAQMLKEHATKQINSTILQITCHACKQQFQA 1434
            QQAKRQIELAEQEFANAKRIRQQAQAELDKAQ LK+HA KQINSTILQITCHACKQ+F A
Sbjct: 360  QQAKRQIELAEQEFANAKRIRQQAQAELDKAQALKQHAIKQINSTILQITCHACKQKFHA 419

Query: 1435 ISSSTTPPDENSLVASYMSSAVTEGEGENDN 1527
                 T  DENSLV SYMSSA TE E E+ N
Sbjct: 420  ----RTQADENSLVMSYMSSATTEDEVEHIN 446


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