BLASTX nr result

ID: Cimicifuga21_contig00006557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006557
         (1610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279592.2| PREDICTED: GPN-loop GTPase 1 homolog [Vitis ...   462   e-127
emb|CBI22859.3| unnamed protein product [Vitis vinifera]              462   e-127
emb|CAN71805.1| hypothetical protein VITISV_029075 [Vitis vinifera]   462   e-127
ref|XP_002512187.1| xpa-binding protein, putative [Ricinus commu...   460   e-127
ref|XP_004152812.1| PREDICTED: GPN-loop GTPase 1 homolog [Cucumi...   456   e-126

>ref|XP_002279592.2| PREDICTED: GPN-loop GTPase 1 homolog [Vitis vinifera]
          Length = 435

 Score =  462 bits (1189), Expect = e-127
 Identities = 246/364 (67%), Positives = 280/364 (76%), Gaps = 11/364 (3%)
 Frame = +2

Query: 254  MDIDLESHNSTIEEP---VVMQMDLPQTSDTQLKGNEA-DLAKSMENLQVGESSSSN--- 412
            MDID +  N  ++ P     MQMD  +++   +KG E  D+++S+E L + ESSS +   
Sbjct: 1    MDIDSDFRNLNLKSPEDDAPMQMDAAESA--HIKGKEKEDISESLEKLHIEESSSGSAGS 58

Query: 413  ----FKKKPVIIIVVGMAGSGKTTFLHRLVSHTQSSNIRGYVINLDPAVMTLPYGANIDI 580
                FK+KPVIIIVVGMAGSGKTTFLHRLV HTQ+SNIRGYVINLDPAV+TLP+GANIDI
Sbjct: 59   SSISFKRKPVIIIVVGMAGSGKTTFLHRLVCHTQASNIRGYVINLDPAVLTLPFGANIDI 118

Query: 581  RDTVRYKEVMKQYNLGPNGGILTSLNLFATKFDEVVSVIEKRADQLDYVLVDTPGQIEIF 760
            RDTVRYKEVMKQ+NLGPNGGILTSLNLFATKFDEVVS+IEKRADQLDYVLVDTPGQIEIF
Sbjct: 119  RDTVRYKEVMKQFNLGPNGGILTSLNLFATKFDEVVSMIEKRADQLDYVLVDTPGQIEIF 178

Query: 761  TWSASGSIITEAFASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNK 940
            TWSASG+IITEAFASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNK
Sbjct: 179  TWSASGAIITEAFASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNK 238

Query: 941  TDVAQHQFALEWMEDFEVFQAAVESDXXXXXXXXXXXXXXXDEFYKNLRXXXXXXXXXXX 1120
             DVAQHQFALEWMEDFEVF AA++SD               DEFYKNL+           
Sbjct: 239  VDVAQHQFALEWMEDFEVFHAALDSDHSYTSTLTRSLSLVLDEFYKNLQSVGVSAVSGAG 298

Query: 1121 MDAFFKAIDTSSNEYMDTYKAXXXXXXXXXXXXXXXXXXXSMEKLRRDMEKSQGQDVVLN 1300
            M+ FFKAI+ S+ EYM +YKA                   +M++LR+DMEKS G+ +VL+
Sbjct: 299  MEEFFKAIEASAEEYMTSYKADLDKRRAEKQRLEEERMRENMDRLRKDMEKSGGETMVLS 358

Query: 1301 TGLK 1312
            TGLK
Sbjct: 359  TGLK 362


>emb|CBI22859.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score =  462 bits (1189), Expect = e-127
 Identities = 246/364 (67%), Positives = 280/364 (76%), Gaps = 11/364 (3%)
 Frame = +2

Query: 254  MDIDLESHNSTIEEP---VVMQMDLPQTSDTQLKGNEA-DLAKSMENLQVGESSSSN--- 412
            MDID +  N  ++ P     MQMD  +++   +KG E  D+++S+E L + ESSS +   
Sbjct: 1    MDIDSDFRNLNLKSPEDDAPMQMDAAESA--HIKGKEKEDISESLEKLHIEESSSGSAGS 58

Query: 413  ----FKKKPVIIIVVGMAGSGKTTFLHRLVSHTQSSNIRGYVINLDPAVMTLPYGANIDI 580
                FK+KPVIIIVVGMAGSGKTTFLHRLV HTQ+SNIRGYVINLDPAV+TLP+GANIDI
Sbjct: 59   SSISFKRKPVIIIVVGMAGSGKTTFLHRLVCHTQASNIRGYVINLDPAVLTLPFGANIDI 118

Query: 581  RDTVRYKEVMKQYNLGPNGGILTSLNLFATKFDEVVSVIEKRADQLDYVLVDTPGQIEIF 760
            RDTVRYKEVMKQ+NLGPNGGILTSLNLFATKFDEVVS+IEKRADQLDYVLVDTPGQIEIF
Sbjct: 119  RDTVRYKEVMKQFNLGPNGGILTSLNLFATKFDEVVSMIEKRADQLDYVLVDTPGQIEIF 178

Query: 761  TWSASGSIITEAFASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNK 940
            TWSASG+IITEAFASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNK
Sbjct: 179  TWSASGAIITEAFASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNK 238

Query: 941  TDVAQHQFALEWMEDFEVFQAAVESDXXXXXXXXXXXXXXXDEFYKNLRXXXXXXXXXXX 1120
             DVAQHQFALEWMEDFEVF AA++SD               DEFYKNL+           
Sbjct: 239  VDVAQHQFALEWMEDFEVFHAALDSDHSYTSTLTRSLSLVLDEFYKNLQSVGVSAVSGAG 298

Query: 1121 MDAFFKAIDTSSNEYMDTYKAXXXXXXXXXXXXXXXXXXXSMEKLRRDMEKSQGQDVVLN 1300
            M+ FFKAI+ S+ EYM +YKA                   +M++LR+DMEKS G+ +VL+
Sbjct: 299  MEEFFKAIEASAEEYMTSYKADLDKRRAEKQRLEEERMRENMDRLRKDMEKSGGETMVLS 358

Query: 1301 TGLK 1312
            TGLK
Sbjct: 359  TGLK 362


>emb|CAN71805.1| hypothetical protein VITISV_029075 [Vitis vinifera]
          Length = 414

 Score =  462 bits (1189), Expect = e-127
 Identities = 246/364 (67%), Positives = 280/364 (76%), Gaps = 11/364 (3%)
 Frame = +2

Query: 254  MDIDLESHNSTIEEP---VVMQMDLPQTSDTQLKGNEA-DLAKSMENLQVGESSSSN--- 412
            MDID +  N  ++ P     MQMD  +++   +KG E  D+++S+E L + ESSS +   
Sbjct: 1    MDIDSDFRNLNLKSPEDDAPMQMDAAESA--HIKGKEKEDISESLEKLHIEESSSGSAGS 58

Query: 413  ----FKKKPVIIIVVGMAGSGKTTFLHRLVSHTQSSNIRGYVINLDPAVMTLPYGANIDI 580
                FK+KPVIIIVVGMAGSGKTTFLHRLV HTQ+SNIRGYVINLDPAV+TLP+GANIDI
Sbjct: 59   SSISFKRKPVIIIVVGMAGSGKTTFLHRLVCHTQASNIRGYVINLDPAVLTLPFGANIDI 118

Query: 581  RDTVRYKEVMKQYNLGPNGGILTSLNLFATKFDEVVSVIEKRADQLDYVLVDTPGQIEIF 760
            RDTVRYKEVMKQ+NLGPNGGILTSLNLFATKFDEVVS+IEKRADQLDYVLVDTPGQIEIF
Sbjct: 119  RDTVRYKEVMKQFNLGPNGGILTSLNLFATKFDEVVSMIEKRADQLDYVLVDTPGQIEIF 178

Query: 761  TWSASGSIITEAFASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNK 940
            TWSASG+IITEAFASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNK
Sbjct: 179  TWSASGAIITEAFASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNK 238

Query: 941  TDVAQHQFALEWMEDFEVFQAAVESDXXXXXXXXXXXXXXXDEFYKNLRXXXXXXXXXXX 1120
             DVAQHQFALEWMEDFEVF AA++SD               DEFYKNL+           
Sbjct: 239  VDVAQHQFALEWMEDFEVFHAALDSDHSYTSTLTRSLSLVLDEFYKNLQSVGVSAVSGAG 298

Query: 1121 MDAFFKAIDTSSNEYMDTYKAXXXXXXXXXXXXXXXXXXXSMEKLRRDMEKSQGQDVVLN 1300
            M+ FFKAI+ S+ EYM +YKA                   +M++LR+DMEKS G+ +VL+
Sbjct: 299  MEEFFKAIEASAEEYMTSYKADLDKRRAEKQRLEEERMRENMDRLRKDMEKSGGETMVLS 358

Query: 1301 TGLK 1312
            TGLK
Sbjct: 359  TGLK 362


>ref|XP_002512187.1| xpa-binding protein, putative [Ricinus communis]
            gi|223548731|gb|EEF50221.1| xpa-binding protein, putative
            [Ricinus communis]
          Length = 407

 Score =  460 bits (1184), Expect = e-127
 Identities = 244/363 (67%), Positives = 276/363 (76%), Gaps = 10/363 (2%)
 Frame = +2

Query: 254  MDIDLESHNSTI---EEPVVMQMDLPQTSDTQLKGNEADLAKSMENLQVGES-------S 403
            MDID E     I   +E + MQ+D          G + +L++SM+ L + +S       S
Sbjct: 1    MDIDTEFDKMNIKSADEGLSMQLD-----SKGALGEKEELSESMDKLNIKQSPSEQAGSS 55

Query: 404  SSNFKKKPVIIIVVGMAGSGKTTFLHRLVSHTQSSNIRGYVINLDPAVMTLPYGANIDIR 583
            S  FK+KPV+IIVVGMAGSGKTTFLHRL+SHTQ++NIRGYV+NLDPAVMTLP+GANIDIR
Sbjct: 56   SITFKRKPVVIIVVGMAGSGKTTFLHRLISHTQATNIRGYVLNLDPAVMTLPFGANIDIR 115

Query: 584  DTVRYKEVMKQYNLGPNGGILTSLNLFATKFDEVVSVIEKRADQLDYVLVDTPGQIEIFT 763
            DTVRYKEVMKQ+NLGPNGGILTSLNLFATKFDEVVSVIEKRA+QLDYVLVDTPGQIEIFT
Sbjct: 116  DTVRYKEVMKQFNLGPNGGILTSLNLFATKFDEVVSVIEKRANQLDYVLVDTPGQIEIFT 175

Query: 764  WSASGSIITEAFASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNKT 943
            WSASG+IITEAFASTFPTVI YVVDTPRS+SP TFMSNMLYACSILYKTRLPLVLAFNKT
Sbjct: 176  WSASGAIITEAFASTFPTVIAYVVDTPRSSSPTTFMSNMLYACSILYKTRLPLVLAFNKT 235

Query: 944  DVAQHQFALEWMEDFEVFQAAVESDXXXXXXXXXXXXXXXDEFYKNLRXXXXXXXXXXXM 1123
            DVAQHQFALEWMEDFE FQAAV SD               DEFYKNL+           M
Sbjct: 236  DVAQHQFALEWMEDFEAFQAAVSSDHSYSSTLTQSLSLVLDEFYKNLKSVGVSAVSGAGM 295

Query: 1124 DAFFKAIDTSSNEYMDTYKAXXXXXXXXXXXXXXXXXXXSMEKLRRDMEKSQGQDVVLNT 1303
            +AFFKA++ S+ EYM+TYKA                   SME+LR+DMEKS+G+ VVL+T
Sbjct: 296  EAFFKAVEASAEEYMETYKAELDKRREEKQRLEDERRRESMERLRKDMEKSKGETVVLST 355

Query: 1304 GLK 1312
            GLK
Sbjct: 356  GLK 358


>ref|XP_004152812.1| PREDICTED: GPN-loop GTPase 1 homolog [Cucumis sativus]
            gi|449525563|ref|XP_004169786.1| PREDICTED: GPN-loop
            GTPase 1 homolog [Cucumis sativus]
          Length = 410

 Score =  456 bits (1173), Expect = e-126
 Identities = 238/360 (66%), Positives = 277/360 (76%), Gaps = 7/360 (1%)
 Frame = +2

Query: 254  MDIDLESHNSTIEEPVVMQMDLPQTSDTQLKGN-EADLAKSMENLQVGESS------SSN 412
            MD+D ++ +   ++     M+   ++D   KG  + +LA S++NL + ESS      ++N
Sbjct: 1    MDVDSDASHKPTDDAECRPMESEDSND---KGKAKEELADSIKNLNIEESSRHAGSLATN 57

Query: 413  FKKKPVIIIVVGMAGSGKTTFLHRLVSHTQSSNIRGYVINLDPAVMTLPYGANIDIRDTV 592
            F++KPVIIIV+GMAGSGKTTFLHRLV HT +SNIRGYV+NLDPAVMTLP+GANIDIRDTV
Sbjct: 58   FRRKPVIIIVIGMAGSGKTTFLHRLVCHTHASNIRGYVMNLDPAVMTLPFGANIDIRDTV 117

Query: 593  RYKEVMKQYNLGPNGGILTSLNLFATKFDEVVSVIEKRADQLDYVLVDTPGQIEIFTWSA 772
            RYKEVMKQ+NLGPNGGILTSLNLFATKFDEV+SVIEKRADQLDYVLVDTPGQIEIFTWSA
Sbjct: 118  RYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSA 177

Query: 773  SGSIITEAFASTFPTVITYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNKTDVA 952
            SG+IITEAFASTFPTVI YVVDTPRS++PVTFMSNMLYACSILYKTRLP+VL FNKTDVA
Sbjct: 178  SGAIITEAFASTFPTVIAYVVDTPRSSNPVTFMSNMLYACSILYKTRLPVVLVFNKTDVA 237

Query: 953  QHQFALEWMEDFEVFQAAVESDXXXXXXXXXXXXXXXDEFYKNLRXXXXXXXXXXXMDAF 1132
            +H+FALEWMEDFE FQAAV SD               DEFYKNL+           MD+F
Sbjct: 238  KHEFALEWMEDFEAFQAAVSSDSSYTSTLSQSLSLVLDEFYKNLKSVGVSAVSGAGMDSF 297

Query: 1133 FKAIDTSSNEYMDTYKAXXXXXXXXXXXXXXXXXXXSMEKLRRDMEKSQGQDVVLNTGLK 1312
            FKAI++S+ EYM+ YKA                   +MEKLRRDME S+GQ VVL+TGLK
Sbjct: 298  FKAIESSAEEYMENYKAELDKRVAEKQRLEEERRRENMEKLRRDMESSKGQTVVLSTGLK 357


Top