BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006554
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide...   200   2e-49
gb|ABI14811.1| chloroplast photosystem II light-inducible protei...   197   1e-48
gb|ABF74605.1| chloroplast photosystem II 10 kDa protein [Agave ...   190   2e-46
gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]   190   2e-46
sp|P10690.1|PSBR_SPIOL RecName: Full=Photosystem II 10 kDa polyp...   189   4e-46

>ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
           vinifera] gi|147789486|emb|CAN71762.1| hypothetical
           protein VITISV_021149 [Vitis vinifera]
           gi|296082806|emb|CBI21811.3| unnamed protein product
           [Vitis vinifera]
          Length = 139

 Score =  200 bits (508), Expect = 2e-49
 Identities = 104/140 (74%), Positives = 110/140 (78%)
 Frame = -3

Query: 614 MATSVMSSLSLKPSPFLENSPAAVRGLPSLARSTASFRVEASAKKKIKTDTPYGPTGGVN 435
           MA SVMSSLSLKPSPF      AVRGLPSLARS++SFRVEAS  KKIKTD PYG  GG+ 
Sbjct: 1   MAASVMSSLSLKPSPFSVER-RAVRGLPSLARSSSSFRVEASGGKKIKTDKPYGIGGGMK 59

Query: 434 FRDGLDASGRKAKGKGLYQFADKYGANVDGYSPIYSPEEWSPSGDSYAGGTTGLLIWAVT 255
             DGLDASGRK KGKG+YQF DKYGANVDGYSPIYSP+EWSP GD Y GGTTGLLIWAVT
Sbjct: 60  LSDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAVT 119

Query: 254 XXXXXXXXXXLVYNTSALSQ 195
                     LVYNTSAL+Q
Sbjct: 120 LAGLLLGGALLVYNTSALAQ 139


>gb|ABI14811.1| chloroplast photosystem II light-inducible protein [Pachysandra
           terminalis]
          Length = 138

 Score =  197 bits (501), Expect = 1e-48
 Identities = 102/140 (72%), Positives = 110/140 (78%)
 Frame = -3

Query: 614 MATSVMSSLSLKPSPFLENSPAAVRGLPSLARSTASFRVEASAKKKIKTDTPYGPTGGVN 435
           MATSVMSSLSLK SPFLE S  A RGLPSLAR ++SFRVEAS  KKIKTD PYG  GG++
Sbjct: 1   MATSVMSSLSLKASPFLEKS--AARGLPSLARPSSSFRVEASGVKKIKTDKPYGTGGGMS 58

Query: 434 FRDGLDASGRKAKGKGLYQFADKYGANVDGYSPIYSPEEWSPSGDSYAGGTTGLLIWAVT 255
            RDGLDASGRK KGKG+YQF DKYGANVDGYSPIY   +WSPSG  Y GGTTGLL+WA+T
Sbjct: 59  LRDGLDASGRKPKGKGVYQFVDKYGANVDGYSPIYDQXDWSPSGAVYVGGTTGLLVWAIT 118

Query: 254 XXXXXXXXXXLVYNTSALSQ 195
                     LVYNTSALSQ
Sbjct: 119 LAALLLGGALLVYNTSALSQ 138


>gb|ABF74605.1| chloroplast photosystem II 10 kDa protein [Agave tequilana]
          Length = 144

 Score =  190 bits (483), Expect = 2e-46
 Identities = 98/138 (71%), Positives = 111/138 (80%), Gaps = 1/138 (0%)
 Frame = -3

Query: 605 SVMSSLSLKPS-PFLENSPAAVRGLPSLARSTASFRVEASAKKKIKTDTPYGPTGGVNFR 429
           +VMSS  ++PS PFLE S A  + LPSLARS++S RVEASAKKKI+T TPYG  GG++ +
Sbjct: 8   TVMSSFFVRPSSPFLERS-AQAKALPSLARSSSSLRVEASAKKKIQTATPYGINGGLSLK 66

Query: 428 DGLDASGRKAKGKGLYQFADKYGANVDGYSPIYSPEEWSPSGDSYAGGTTGLLIWAVTXX 249
           DG DASGRKAKGKG+YQF DKYGANVDGYSPIYSPEEWSPSGD Y GGTTGLLIWA+T  
Sbjct: 67  DGADASGRKAKGKGVYQFVDKYGANVDGYSPIYSPEEWSPSGDVYVGGTTGLLIWAITLA 126

Query: 248 XXXXXXXXLVYNTSALSQ 195
                   LVYNTSAL+Q
Sbjct: 127 GLLAGGALLVYNTSALAQ 144


>gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]
          Length = 138

 Score =  190 bits (482), Expect = 2e-46
 Identities = 97/140 (69%), Positives = 108/140 (77%)
 Frame = -3

Query: 614 MATSVMSSLSLKPSPFLENSPAAVRGLPSLARSTASFRVEASAKKKIKTDTPYGPTGGVN 435
           MA+SV+SSLSLKPSP    SP  V+GLPSLAR  +   V+AS  KKIKTDTP+G  GG+ 
Sbjct: 1   MASSVISSLSLKPSPISARSP--VKGLPSLARPASGLTVKASGGKKIKTDTPFGIGGGMK 58

Query: 434 FRDGLDASGRKAKGKGLYQFADKYGANVDGYSPIYSPEEWSPSGDSYAGGTTGLLIWAVT 255
            +DGLDASGRK KGKG+YQF DKYGANVDGYSPIYSP+EWSPSGD Y GG TGLLIWAVT
Sbjct: 59  LKDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAVT 118

Query: 254 XXXXXXXXXXLVYNTSALSQ 195
                     LVYNTSAL+Q
Sbjct: 119 LAGLLAGGALLVYNTSALAQ 138


>sp|P10690.1|PSBR_SPIOL RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
           Flags: Precursor gi|170127|gb|AAA34037.1| 10kd
           polypeptide precursor [Spinacia oleracea]
          Length = 140

 Score =  189 bits (479), Expect = 4e-46
 Identities = 96/140 (68%), Positives = 110/140 (78%)
 Frame = -3

Query: 614 MATSVMSSLSLKPSPFLENSPAAVRGLPSLARSTASFRVEASAKKKIKTDTPYGPTGGVN 435
           MATSVMSSLSLKPS F  ++ +AV+GLPSL+RS+ASF V AS  KKIK D P G  GG+ 
Sbjct: 1   MATSVMSSLSLKPSSFGVDTKSAVKGLPSLSRSSASFTVRASGVKKIKVDKPLGIGGGMK 60

Query: 434 FRDGLDASGRKAKGKGLYQFADKYGANVDGYSPIYSPEEWSPSGDSYAGGTTGLLIWAVT 255
            RDG+D+SGRK  GKG+YQF DKYGANVDGYSPIY+ EEW+P+GD YAGGTTGLLIWAVT
Sbjct: 61  LRDGVDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAGGTTGLLIWAVT 120

Query: 254 XXXXXXXXXXLVYNTSALSQ 195
                     LVYNTSAL+Q
Sbjct: 121 LAGLLAGGALLVYNTSALAQ 140