BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006535
         (3083 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   920   0.0  
emb|CBI25341.3| unnamed protein product [Vitis vinifera]              920   0.0  
ref|XP_002520888.1| snf2 histone linker phd ring helicase, putat...   843   0.0  
ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   816   0.0  
ref|XP_002881739.1| SNF2 domain-containing protein [Arabidopsis ...   763   0.0  

>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score =  920 bits (2378), Expect = 0.0
 Identities = 506/914 (55%), Positives = 642/914 (70%), Gaps = 15/914 (1%)
 Frame = -3

Query: 3060 SPGLRALHHSPMTMEEVLGVLVSKSKIEGEEALRKAVMSLNALAGIAIIKGELPQAVSLY 2881
            S GLR+L  +PMTMEE+L VLVSK+KIEGEEALRK+V++LN LAGIAIIK ++ QAVSLY
Sbjct: 795  SSGLRSLQQAPMTMEEILSVLVSKTKIEGEEALRKSVVALNGLAGIAIIKQDISQAVSLY 854

Query: 2880 REALNLAEEHSDDFQLDPLLNIHIHHNLAEIFTDTAGSLDQAQSMECQFPENIEERALKL 2701
            +EAL LAEEHS+DF+LDPLLN+HIHHNL EI    + S   ++  E  FP + EE+A K+
Sbjct: 855  KEALALAEEHSEDFRLDPLLNLHIHHNLTEILPLPSESSHHSKGGE--FPRSAEEKASKI 912

Query: 2700 SRFNKSDERSAKRQKISKENSAYFNFCEGHVKNEGKEFDSDIPIVGLKREG---GVECDT 2530
                + D+  AKRQK+  E  +  N         G+E +       L  +G    +ECD 
Sbjct: 913  HNVEQCDQYMAKRQKVGGEYHSGLN---------GEERELPCSTSNLSEDGVNDNIECDA 963

Query: 2529 QPLIPFK----ARFKMAYEILKQKFLTVFVSKLSQAQQEFRNSHMQVCNALRELKNEPVG 2362
            +P I  +       +   E +KQKFL++F SKLS AQQE + S+MQVC++L + KN+   
Sbjct: 964  EPHISSRLFNDGCLRTTCENIKQKFLSLFSSKLSVAQQELKKSYMQVCDSLNDGKNQHSV 1023

Query: 2361 WWLEALHHIEKNKDSSNQLISKVDDTLFGILSSSKQSRVASRFRSISGMKYVIQAGLESL 2182
            WWLEAL  IE+NKD+S +LI K+ D + G L++++ SR+ S FRSI+ + Y IQ GL+SL
Sbjct: 1024 WWLEALTQIEQNKDASGELIKKIGDAVSGPLNNARSSRIDSCFRSINALMYHIQTGLDSL 1083

Query: 2181 ESSRLALIERILEVDKTMEEPSDEDIXXXXXXXXXXXCQDKKGKGPNCVSCELDNLFEVY 2002
            E+SR  L++R+LE+++TME P +EDI                G GP CV CELD LF+ Y
Sbjct: 1084 EASRQTLVDRLLEINQTMESPREEDIDRVRYCPNC----QANGDGPLCVHCELDELFQGY 1139

Query: 2001 KARLFFCKKEGNGGESVVGTAEEAIELQNKGSALNHFLFGLXXXXXXXXSPVVGSEENKT 1822
            +ARLF   K   G   ++ +AEEA++LQ K SALN F               VG++EN  
Sbjct: 1140 EARLFRLNKAHGG---MITSAEEAVDLQKKISALNRFYRTCSQSNKNSTPSNVGNKENMR 1196

Query: 1821 QRDVRKKIMVHHLSPSELEIVLSVLKTFSKAWLGKDGLLEATKHLVLLEVMRKEYTPARF 1642
            +RDV +K++V   SPSELE+VL V+K+  KA LG++G  EATK L+LLE MRKEY  AR 
Sbjct: 1197 KRDVGEKLVVSK-SPSELEVVLGVIKSSCKAQLGREGQSEATKQLLLLEGMRKEYAHARS 1255

Query: 1641 LANAQVQILTAHDELKQATSRLRLRESDNETSIDALSPEGLVTADMENSSEKFTSLSLLS 1462
            LA AQ Q+L AHDE+K ATSRLRLRE +N+ SIDALS   L  A +ENSSE+  SL+LLS
Sbjct: 1256 LAIAQAQVLRAHDEIKMATSRLRLREDENDKSIDALSLNELDAAIVENSSERLMSLTLLS 1315

Query: 1461 RIRGQHRYLKGLVLSKQISNMES---SSMHVDTDN---SASASHTEGLAGKVNDEACPVC 1300
            RI+GQ RYLKGLVLSKQ   +ES   +S+  DT     S           + +DEACPVC
Sbjct: 1316 RIKGQLRYLKGLVLSKQKLQLESPNNASLTQDTATLLISCPVEEKNKCIRETDDEACPVC 1375

Query: 1299 HENLSNQKMVFQCGHVTCCKCLVAMIEQRSFPHQNGQDKWVMCPTCRQHTDFRNIACADD 1120
             E LSN++MVFQCGHV CC CL AM E+R   H   QDKW+MCPTCRQHTD  NIA ADD
Sbjct: 1376 QEKLSNRRMVFQCGHVICCNCLFAMTEKRLVHHGKFQDKWLMCPTCRQHTDVGNIAYADD 1435

Query: 1119 RQRKACNSSIQNTSHCQDSLEASITVQGSYGTKIEAVTRRILWIKCTDPVAKVLVFSNWK 940
            RQ K+C+S+  +T    +  EAS+ VQGSYGTKIEAVTRRILWIKCT+P AK+LVFS+W 
Sbjct: 1436 RQTKSCDSAELHTVQSVEKSEASVIVQGSYGTKIEAVTRRILWIKCTEPKAKILVFSSWN 1495

Query: 939  DVLDVLEHALLANHVSYIRMKGGRKAHVAITRFKGNNDDARGTDERCDQQPGKKS--FQV 766
            DVL+VLEHAL AN+++Y+RMKGGRK+HVAI+ F+     A G  +   QQP  +    QV
Sbjct: 1496 DVLNVLEHALNANNITYVRMKGGRKSHVAISHFRRQRTSAEGNGQTHAQQPEPEPEFVQV 1555

Query: 765  MLLLVQHGANGLNLLEAKHVILIEPLLNPAAEAQAINRVHRIGQDKTTFVHRFMVKDSVE 586
            +LLL+QHGANGLNLLEA+HV+L+EPLLNPAAEAQAI+RVHRIGQ+  T VHRF+VKD+VE
Sbjct: 1556 LLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQENRTLVHRFIVKDTVE 1615

Query: 585  ESIYKLNRSRTASTIISGNTKNQDQPVLSIKDVESLFSSAIPAMPSEHENVPVESLMHLP 406
            ESIYKLNRSR  ++ ISGNTKNQDQP+L++KD+E+LF + +P+   + E  P  SLMHLP
Sbjct: 1616 ESIYKLNRSRNTNSFISGNTKNQDQPLLTLKDLEALF-TPVPSSVPQSEEKPTGSLMHLP 1674

Query: 405  PSVAAALAAERRWK 364
            PSVAAA+AAERR K
Sbjct: 1675 PSVAAAIAAERRLK 1688


>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score =  920 bits (2378), Expect = 0.0
 Identities = 506/914 (55%), Positives = 642/914 (70%), Gaps = 15/914 (1%)
 Frame = -3

Query: 3060 SPGLRALHHSPMTMEEVLGVLVSKSKIEGEEALRKAVMSLNALAGIAIIKGELPQAVSLY 2881
            S GLR+L  +PMTMEE+L VLVSK+KIEGEEALRK+V++LN LAGIAIIK ++ QAVSLY
Sbjct: 820  SSGLRSLQQAPMTMEEILSVLVSKTKIEGEEALRKSVVALNGLAGIAIIKQDISQAVSLY 879

Query: 2880 REALNLAEEHSDDFQLDPLLNIHIHHNLAEIFTDTAGSLDQAQSMECQFPENIEERALKL 2701
            +EAL LAEEHS+DF+LDPLLN+HIHHNL EI    + S   ++  E  FP + EE+A K+
Sbjct: 880  KEALALAEEHSEDFRLDPLLNLHIHHNLTEILPLPSESSHHSKGGE--FPRSAEEKASKI 937

Query: 2700 SRFNKSDERSAKRQKISKENSAYFNFCEGHVKNEGKEFDSDIPIVGLKREG---GVECDT 2530
                + D+  AKRQK+  E  +  N         G+E +       L  +G    +ECD 
Sbjct: 938  HNVEQCDQYMAKRQKVGGEYHSGLN---------GEERELPCSTSNLSEDGVNDNIECDA 988

Query: 2529 QPLIPFK----ARFKMAYEILKQKFLTVFVSKLSQAQQEFRNSHMQVCNALRELKNEPVG 2362
            +P I  +       +   E +KQKFL++F SKLS AQQE + S+MQVC++L + KN+   
Sbjct: 989  EPHISSRLFNDGCLRTTCENIKQKFLSLFSSKLSVAQQELKKSYMQVCDSLNDGKNQHSV 1048

Query: 2361 WWLEALHHIEKNKDSSNQLISKVDDTLFGILSSSKQSRVASRFRSISGMKYVIQAGLESL 2182
            WWLEAL  IE+NKD+S +LI K+ D + G L++++ SR+ S FRSI+ + Y IQ GL+SL
Sbjct: 1049 WWLEALTQIEQNKDASGELIKKIGDAVSGPLNNARSSRIDSCFRSINALMYHIQTGLDSL 1108

Query: 2181 ESSRLALIERILEVDKTMEEPSDEDIXXXXXXXXXXXCQDKKGKGPNCVSCELDNLFEVY 2002
            E+SR  L++R+LE+++TME P +EDI                G GP CV CELD LF+ Y
Sbjct: 1109 EASRQTLVDRLLEINQTMESPREEDIDRVRYCPNC----QANGDGPLCVHCELDELFQGY 1164

Query: 2001 KARLFFCKKEGNGGESVVGTAEEAIELQNKGSALNHFLFGLXXXXXXXXSPVVGSEENKT 1822
            +ARLF   K   G   ++ +AEEA++LQ K SALN F               VG++EN  
Sbjct: 1165 EARLFRLNKAHGG---MITSAEEAVDLQKKISALNRFYRTCSQSNKNSTPSNVGNKENMR 1221

Query: 1821 QRDVRKKIMVHHLSPSELEIVLSVLKTFSKAWLGKDGLLEATKHLVLLEVMRKEYTPARF 1642
            +RDV +K++V   SPSELE+VL V+K+  KA LG++G  EATK L+LLE MRKEY  AR 
Sbjct: 1222 KRDVGEKLVVSK-SPSELEVVLGVIKSSCKAQLGREGQSEATKQLLLLEGMRKEYAHARS 1280

Query: 1641 LANAQVQILTAHDELKQATSRLRLRESDNETSIDALSPEGLVTADMENSSEKFTSLSLLS 1462
            LA AQ Q+L AHDE+K ATSRLRLRE +N+ SIDALS   L  A +ENSSE+  SL+LLS
Sbjct: 1281 LAIAQAQVLRAHDEIKMATSRLRLREDENDKSIDALSLNELDAAIVENSSERLMSLTLLS 1340

Query: 1461 RIRGQHRYLKGLVLSKQISNMES---SSMHVDTDN---SASASHTEGLAGKVNDEACPVC 1300
            RI+GQ RYLKGLVLSKQ   +ES   +S+  DT     S           + +DEACPVC
Sbjct: 1341 RIKGQLRYLKGLVLSKQKLQLESPNNASLTQDTATLLISCPVEEKNKCIRETDDEACPVC 1400

Query: 1299 HENLSNQKMVFQCGHVTCCKCLVAMIEQRSFPHQNGQDKWVMCPTCRQHTDFRNIACADD 1120
             E LSN++MVFQCGHV CC CL AM E+R   H   QDKW+MCPTCRQHTD  NIA ADD
Sbjct: 1401 QEKLSNRRMVFQCGHVICCNCLFAMTEKRLVHHGKFQDKWLMCPTCRQHTDVGNIAYADD 1460

Query: 1119 RQRKACNSSIQNTSHCQDSLEASITVQGSYGTKIEAVTRRILWIKCTDPVAKVLVFSNWK 940
            RQ K+C+S+  +T    +  EAS+ VQGSYGTKIEAVTRRILWIKCT+P AK+LVFS+W 
Sbjct: 1461 RQTKSCDSAELHTVQSVEKSEASVIVQGSYGTKIEAVTRRILWIKCTEPKAKILVFSSWN 1520

Query: 939  DVLDVLEHALLANHVSYIRMKGGRKAHVAITRFKGNNDDARGTDERCDQQPGKKS--FQV 766
            DVL+VLEHAL AN+++Y+RMKGGRK+HVAI+ F+     A G  +   QQP  +    QV
Sbjct: 1521 DVLNVLEHALNANNITYVRMKGGRKSHVAISHFRRQRTSAEGNGQTHAQQPEPEPEFVQV 1580

Query: 765  MLLLVQHGANGLNLLEAKHVILIEPLLNPAAEAQAINRVHRIGQDKTTFVHRFMVKDSVE 586
            +LLL+QHGANGLNLLEA+HV+L+EPLLNPAAEAQAI+RVHRIGQ+  T VHRF+VKD+VE
Sbjct: 1581 LLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQENRTLVHRFIVKDTVE 1640

Query: 585  ESIYKLNRSRTASTIISGNTKNQDQPVLSIKDVESLFSSAIPAMPSEHENVPVESLMHLP 406
            ESIYKLNRSR  ++ ISGNTKNQDQP+L++KD+E+LF + +P+   + E  P  SLMHLP
Sbjct: 1641 ESIYKLNRSRNTNSFISGNTKNQDQPLLTLKDLEALF-TPVPSSVPQSEEKPTGSLMHLP 1699

Query: 405  PSVAAALAAERRWK 364
            PSVAAA+AAERR K
Sbjct: 1700 PSVAAAIAAERRLK 1713


>ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis]
            gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring
            helicase, putative [Ricinus communis]
          Length = 1588

 Score =  843 bits (2177), Expect = 0.0
 Identities = 481/909 (52%), Positives = 609/909 (66%), Gaps = 6/909 (0%)
 Frame = -3

Query: 3060 SPGLRALHHSPMTMEEVLGVLVSKSKIEGEEALRKAVMSLNALAGIAIIKGELPQAVSLY 2881
            S GLR++  SPM MEE+L VL+ K+KIEGEEALRK V++LNALAGIAII+ +  QA  LY
Sbjct: 719  SSGLRSVQQSPMNMEEILMVLIGKTKIEGEEALRKLVVALNALAGIAIIEQKFSQAALLY 778

Query: 2880 REALNLAEEHSDDFQLDPLLNIHIHHNLAEIFTDTAGSLDQAQSMECQFPENIEERALKL 2701
            REAL ++EEHS+DF+LDPLLNIHIHHNLAEI            S   Q   N   +  KL
Sbjct: 779  REALAVSEEHSEDFRLDPLLNIHIHHNLAEILPVVTDCSTHLSSNGQQLHGN-SGKVFKL 837

Query: 2700 SRFNKSDERSAKRQKISKENSAYFNFCEGHVKNEGKEFDSDIPIVGLKREGGVECDTQPL 2521
                + +  + KRQK+S ++ + F      V  E   F S+  + G K  GG +    P 
Sbjct: 838  QTCEEWETNALKRQKVSGDHDSDFT-----VDTENILFASENALNGDK--GGDDKSNLPS 890

Query: 2520 IPFKARF-KMAYEILKQKFLTVFVSKLSQAQQEFRNSHMQVCNALRELKNEPVGWWLEAL 2344
              F   + K   E LKQK+L++F +KLS AQ++FR S+MQVCNA+ + +N+   WWL AL
Sbjct: 891  RSFSEGYLKATCEELKQKYLSMFTAKLSMAQKDFRKSYMQVCNAISDGENQHSAWWLNAL 950

Query: 2343 HHIEKNKDSSNQLISKVDDTLFGILSSSKQSRVASRFRSISGMKYVIQAGLESLESSRLA 2164
            +H E NKD    LI K+++ + G L++S+ SR+AS+FRSI+ +KY IQ  L+ LE+SR  
Sbjct: 951  YHAELNKDFKRDLIKKIEEAVSGTLNNSRSSRIASQFRSIAALKYHIQTRLDQLEASRKT 1010

Query: 2163 LIERILEVDKTMEEPSDEDIXXXXXXXXXXXCQDKKGKGPNCVSCELDNLFEVYKARLFF 1984
            L++R+LE+D TM +P + DI             D    GP C+ CELD LF+ Y+ARLF 
Sbjct: 1011 LLDRLLEIDLTMGQPKEADIERVRFCRICQAVDD----GPICLHCELDELFQDYEARLFR 1066

Query: 1983 CKKEGNGGESVVGTAEEAIELQNKGSALNHFLFGLXXXXXXXXSPVVGSEENKTQRDVRK 1804
              K       ++ +AEEA++LQ K SALN F + L        S    ++ +K +RD  +
Sbjct: 1067 LNKLRG---DIITSAEEAVDLQKKNSALNRFYWNLSGTNRSSTSSDDANDASK-RRDAGE 1122

Query: 1803 KIMVHHLSPSELEIVLSVLKTFSKAWLGKDGLLEATKHLVLLEVMRKEYTPARFLANAQV 1624
            +++V   SPSELE+VL V+K++ K  LGK+G+  A+K L +LE MRKEY+ AR LA AQ 
Sbjct: 1123 RVVVSK-SPSELEVVLGVVKSYCKIQLGKEGISAASKQLHILEGMRKEYSHARSLAVAQA 1181

Query: 1623 QILTAHDELKQATSRLRLRESDNETSIDALSPEGLVTADMENSSEKFTSLSLLSRIRGQH 1444
            QIL AHDE+K ATSRL LRE++++ S+DAL P  L +A +  SSEKF SL+LLSRI+G+ 
Sbjct: 1182 QILHAHDEIKMATSRLHLRENEDDNSLDALGPNELESASVLQSSEKFISLTLLSRIKGRL 1241

Query: 1443 RYLKGLVLSKQISNMESSSMHVDTDNSASASHTEGLAG----KVNDEACPVCHENLSNQK 1276
            RYLKGLVLSKQ    ESSS    T   A+ S +E        K ++EACP+C E + NQK
Sbjct: 1242 RYLKGLVLSKQKPPPESSSNSSLTQEMATMSTSEEKMSDDLPKDDEEACPICQEKMHNQK 1301

Query: 1275 MVFQCGHVTCCKCLVAMIEQRSFPHQNG-QDKWVMCPTCRQHTDFRNIACADDRQRKACN 1099
            MVFQCGHVTCCKCL AM E     H N  Q KWVMCPTCRQHTDFRNIA ADDR  K+CN
Sbjct: 1302 MVFQCGHVTCCKCLFAMTEH----HDNKFQRKWVMCPTCRQHTDFRNIAYADDRNDKSCN 1357

Query: 1098 SSIQNTSHCQDSLEASITVQGSYGTKIEAVTRRILWIKCTDPVAKVLVFSNWKDVLDVLE 919
            S++ NT    +  EAS+ VQGSYGTKIEA+TRRIL IK +DP AKVLVFS+W DVLDVLE
Sbjct: 1358 SAVLNTVQGYEKCEASLIVQGSYGTKIEAITRRILGIKSSDPEAKVLVFSSWNDVLDVLE 1417

Query: 918  HALLANHVSYIRMKGGRKAHVAITRFKGNNDDARGTDERCDQQPGKKSFQVMLLLVQHGA 739
            HA  AN ++YIRMKGG               +  G      Q+   K  QV++LLVQHGA
Sbjct: 1418 HAFNANGITYIRMKGG--------------SNTIGNHRVHSQKESPKPIQVLMLLVQHGA 1463

Query: 738  NGLNLLEAKHVILIEPLLNPAAEAQAINRVHRIGQDKTTFVHRFMVKDSVEESIYKLNRS 559
            NGLNLLEA+HV+L+EPLLNPAAE QAI+RVHRIGQ+  T VHRFMVK++VEESIYKLNRS
Sbjct: 1464 NGLNLLEAQHVVLVEPLLNPAAETQAISRVHRIGQENRTLVHRFMVKNTVEESIYKLNRS 1523

Query: 558  RTASTIISGNTKNQDQPVLSIKDVESLFSSAIPAMPSEHENVPVESLMHLPPSVAAALAA 379
            R  S+ ISGNTKNQDQ +L++KDVESLF+S +P    E      ESL HLPPS AAA+AA
Sbjct: 1524 RNTSSFISGNTKNQDQQLLTLKDVESLFTSTVPKGDEE----LTESLRHLPPSAAAAIAA 1579

Query: 378  ERRWKGDLA 352
            ERR K + A
Sbjct: 1580 ERRLKENTA 1588


>ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Glycine max]
          Length = 1600

 Score =  816 bits (2107), Expect = 0.0
 Identities = 472/915 (51%), Positives = 603/915 (65%), Gaps = 18/915 (1%)
 Frame = -3

Query: 3060 SPGLRALHHSPMTMEEVLGVLVSKSKIEGEEALRKAVMSLNALAGIAIIKGELPQAVSLY 2881
            S GLR+L  SPMTMEE+L VL+SK+KIEGEEALRK V++LNALA IA I+ +  QA  LY
Sbjct: 725  SSGLRSLQQSPMTMEEILMVLISKTKIEGEEALRKLVIALNALAAIAAIQNDFSQATLLY 784

Query: 2880 REALNLAEEHSDDFQLDPLLNIHIHHNLAEIFTDTAGSLDQAQSMECQFPENIEERALKL 2701
             EAL+LAEE S+DF+LDPLLNIHIHHNLAEI          + S   QF    + +  K 
Sbjct: 785  SEALSLAEEQSEDFRLDPLLNIHIHHNLAEILPLVPNFALISPSKGKQFSGTSKFKMTKR 844

Query: 2700 SRFNKSDERSAKRQKIS-----------KENSAYFNFCEGHVKNEGKEFDSDIPIVGLKR 2554
                K +    KRQKIS           + +   F+  E  + NE +EFDS   I  L  
Sbjct: 845  HLSVKVEHCHEKRQKISGCDDVNVTVLSEPSDVAFSHSENDL-NEDQEFDSLSAINSLI- 902

Query: 2553 EGGVECDTQPLIPFKARFKMAYEILKQKFLTVFVSKLSQAQQEFRNSHMQVCNALRELK- 2377
                EC+                  KQK+L+VF SKLS +QQEF+NS+ QVCNA  + + 
Sbjct: 903  ---AECEDS----------------KQKYLSVFSSKLSTSQQEFQNSYTQVCNAYHDSRT 943

Query: 2376 NEPVGWWLEALHHIEKNKDSSNQLISKVDDTLFGILSSSKQSRVASRFRSISGMKYVIQA 2197
            ++   WWLEALHH E+NKD S +LI K+++ + G  ++SK SRV +RFRSIS +KY IQ 
Sbjct: 944  DQDTFWWLEALHHAEQNKDFSTELIRKIEEAISGTSNNSKSSRVTARFRSISSLKYQIQT 1003

Query: 2196 GLESLESSRLALIERILEVDKTMEEPSDEDIXXXXXXXXXXXCQDKKGKGPNCVSCELDN 2017
             L+ LE+SR  L++R+LE+D+TME+P +EDI             D    GP C+ CELD 
Sbjct: 1004 ALDQLEASRKMLLDRLLEIDQTMEKPKEEDIERVGKCRNCQPNCD----GPPCILCELDE 1059

Query: 2016 LFEVYKARLFFCKKEGNGGESVVGTAEEAIELQNKGSALNHFLFGLXXXXXXXXSPVVGS 1837
            LF+ Y+ARLF  K E  G   ++ +AEEA++ Q K  ALNHFL  L           +G 
Sbjct: 1060 LFQDYEARLFVLKNERGG---IISSAEEAVDFQKKNFALNHFLSKLSQSNHSSTVSDIGH 1116

Query: 1836 EENKTQRDVRKKIMVHHLSPSELEIVLSVLKTFSKAWLGKDGLLEATKHLVLLEVMRKEY 1657
            EE+K +R+V ++++V   S SELE++L VLK + K+ LG+D +  ATKHL + E MRKE+
Sbjct: 1117 EESK-KRNVGQRVVVSK-SASELELILGVLKNYCKSRLGRDSVSAATKHLHVFEGMRKEF 1174

Query: 1656 TPARFLANAQVQILTAHDELKQATSRLRLRESDNETSIDALSPEGLVTADMENSSEKFTS 1477
              AR LA AQ   L AHDE+K A SRL LR ++++ S+DAL    L  A    S +KF S
Sbjct: 1175 GHARSLALAQAMYLRAHDEIKMAVSRLHLRANEDDKSLDALGENELAAASSNFSHDKFMS 1234

Query: 1476 LSLLSRIRGQHRYLKGLVLSKQISNMES-SSMHVDTDNSASASHTE---GLAGKVNDEAC 1309
            L++LS+I+G+ RYLKGLV SKQ    ES +S     + +A+ + TE    L  K +DE C
Sbjct: 1235 LTMLSQIKGKLRYLKGLVQSKQKLQFESPTSSSFTRETTATPNSTEEKDALLSKSDDETC 1294

Query: 1308 PVCHENLSNQKMVFQCGHVTCCKCLVAMIEQRSFPHQNGQ-DKWVMCPTCRQHTDFRNIA 1132
            P+C E L  QKMVFQCGHVTCCKCL AM E+R    QN +   WVMCPTCRQHTDF NIA
Sbjct: 1295 PICQEKLGKQKMVFQCGHVTCCKCLFAMTEKRL---QNSKLHNWVMCPTCRQHTDFGNIA 1351

Query: 1131 CADDRQRKACNSSIQNTSHCQDSLEASITVQGSYGTKIEAVTRRILWIKCTDPVAKVLVF 952
             A D Q ++ + S+ +     +  EASI+V+GSYGTKIEAVTRRILW+K  D  AKVLVF
Sbjct: 1352 YAVDAQHESSDPSVLHPIDSSEKFEASISVKGSYGTKIEAVTRRILWVKANDHRAKVLVF 1411

Query: 951  SNWKDVLDVLEHALLANHVSYIRMKGGRKAHVAITRFKGNNDDARGTDERCDQQPGKKSF 772
            S+W DVLDVLEHA  AN+++YIRMKGG       ++F+G  +  +    +C+     KS 
Sbjct: 1412 SSWNDVLDVLEHAFAANNITYIRMKGG-------SQFRGKQNGTK----KCEGST-PKSI 1459

Query: 771  QVMLLLVQHGANGLNLLEAKHVILIEPLLNPAAEAQAINRVHRIGQDKTTFVHRFMVKDS 592
            QV+LLL+QHGANGLNLLEA+HV+L+EPLLNPAAEAQAI+RVHRIGQ   T +HRF+VKD+
Sbjct: 1460 QVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIVKDT 1519

Query: 591  VEESIYKLNRSRTASTIISGNTKNQDQPVLSIKDVESLFSSAIPAMPSEHENVPVE-SLM 415
            VEESIYKLNRSR+  + ISGNTKNQDQPVL++KDVE+L S A   MP   EN   + +L 
Sbjct: 1520 VEESIYKLNRSRSNHSFISGNTKNQDQPVLTLKDVEALLSRAPLTMPESDENPNRDTNLR 1579

Query: 414  HLPPSVAAALAAERR 370
            HLPPSVAAA+AAERR
Sbjct: 1580 HLPPSVAAAVAAERR 1594


>ref|XP_002881739.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297327578|gb|EFH57998.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1635

 Score =  763 bits (1971), Expect = 0.0
 Identities = 451/912 (49%), Positives = 587/912 (64%), Gaps = 9/912 (0%)
 Frame = -3

Query: 3060 SPGLRALHHSPMTMEEVLGVLVSKSKIEGEEALRKAVMSLNALAGIAIIKGELPQAVSLY 2881
            S GLR+L  +PMTMEE+L VLV K++ EGEEALR  +++LN +A IA++K E  +AVSLY
Sbjct: 769  SSGLRSLQQTPMTMEEILMVLVKKTQKEGEEALRVLIVALNGIAAIAMLKQEFSEAVSLY 828

Query: 2880 REALNLAEEHSDDFQLDPLLNIHIHHNLAEIFTDTAGSLDQAQSMECQFPENIEERALKL 2701
            +EAL++ EEH++DF+LDPLLNIHI HNLAEI       L  A+S   +   +     +K+
Sbjct: 829  KEALSITEEHAEDFRLDPLLNIHILHNLAEI-------LPMAKSYGVKLSASGRPE-IKI 880

Query: 2700 SRFNKSDERSAKRQKISKENSAYFNFCEGHVKNEGKEFDSDIPIVGLKREGGV--ECDTQ 2527
               +    R++KRQ+I                NE +    D P  GLK++G    EC T 
Sbjct: 881  DVQDDDHHRASKRQRI----------------NELESLTHDSPDSGLKKDGEYHEECKTL 924

Query: 2526 PLIPFKARFKMAYEILKQKFLTVFVSKLSQAQQEFRNSHMQVCNALRELKNEPVGWWLEA 2347
             ++          + +K K+L+ F SKLS AQQEF+ S+ QV  +L  +  +   WWL+A
Sbjct: 925  NIV---------CDTMKVKYLSAFNSKLSAAQQEFKKSYNQVSESLSNMGKQRSVWWLDA 975

Query: 2346 LHHIEKNKDSSNQLISKVDDTLFGILSSSKQSRVASRFRSISGMKYVIQAGLESLESSRL 2167
            L   E+NKD S++L  K+++ L G L++S  SR +SRFR+I GMK  +Q  ++ LESSR 
Sbjct: 976  LQLTEQNKDFSSELTRKIEEILHGSLNNSSSSRASSRFRTIHGMKLHLQTCMDMLESSRK 1035

Query: 2166 ALIERILEVDKTMEEPSDEDIXXXXXXXXXXXCQDKKGKGPNCVSCELDNLFEVYKARLF 1987
             +I+RILE+D+TME+P  EDI              KK  GP C+ CELD LF+ Y+ARLF
Sbjct: 1036 KVIDRILEIDQTMEKPKLEDIERISNCKYC----KKKDDGPTCIHCELDELFQEYEARLF 1091

Query: 1986 FCKKEGNGGESVVGTAEEAIELQNKGSALNHFLFGLXXXXXXXXSPVVGSEENKTQRDVR 1807
               K    G   +  AEE + LQ K  ALN F  GL        +P  G +E  T+R+  
Sbjct: 1092 RLNK-SRRGVMEIAAAEETVHLQKKRDALNLFFIGLSSRSKDLNAP-RGDDEEPTKRNAG 1149

Query: 1806 KKIMVHHLSPSELEIVLSVLKTFSKAWLGKDGLLEATKHLVLLEVMRKEYTPARFLANAQ 1627
              ++V   SPSE EIVL V++   K  L ++  L ATKHL  LEVMRKEY  AR LA AQ
Sbjct: 1150 DTVVVSK-SPSETEIVLGVIRNHCKTHLDRESKLAATKHLHTLEVMRKEYAHARALARAQ 1208

Query: 1626 VQILTAHDELKQATSRLRLRESDNETSIDALSPEGLVTADMENSSEKFTSLSLLSRIRGQ 1447
             Q+L A+DE+  +T RL+L+ES+++TSI ALS + L  A + N+++KF + S +  I+G+
Sbjct: 1209 AQLLRAYDEINMSTMRLQLKESEDDTSIYALSRDELDVASVLNTNDKFMAQSSVLSIKGK 1268

Query: 1446 HRYLKGLVLSKQISNMESSSMHVDTDNSASAS---HTEGLAGKVNDEACPVCHENLSNQK 1276
             RYLKGL+ SKQ    ES  +      +  AS     EG      DEACP+C E L NQK
Sbjct: 1269 LRYLKGLIKSKQKQESESPDLSSPIHETLEASDPVEQEGENLLKRDEACPICQEILRNQK 1328

Query: 1275 MVFQCGHVTCCKCLVAMIEQRSFPHQNGQDKWVMCPTCRQHTDFRNIACADDRQRKACNS 1096
            MVFQCGH TCC C  AM E++S   Q    KWVMCP CRQHTD RNIA ADDR+    NS
Sbjct: 1329 MVFQCGHSTCCNCFFAMTERKSV--QETLQKWVMCPICRQHTDVRNIAYADDRR----NS 1382

Query: 1095 SIQNTSHCQDSLEASITVQGSYGTKIEAVTRRILWIKCTDPVAKVLVFSNWKDVLDVLEH 916
            S  +  H  +  EAS+ VQGSYGTKIEAVTRRILWIK +DP AKVLVFS+W DVLDVL+H
Sbjct: 1383 SSSDQDHKDN--EASLVVQGSYGTKIEAVTRRILWIKSSDPQAKVLVFSSWNDVLDVLQH 1440

Query: 915  ALLANHVSYIRMKGGRKAHVAITRFKGNNDDARGTDERCDQQPGKKSFQVMLLLVQHGAN 736
            A  AN ++ IRMKGGRK+  AI++FKG+  + + T+++ ++ P     QV+LLLVQHGAN
Sbjct: 1441 AFAANSITCIRMKGGRKSQTAISKFKGSEKETQKTNQK-EENP----IQVLLLLVQHGAN 1495

Query: 735  GLNLLEAKHVILIEPLLNPAAEAQAINRVHRIGQDKTTFVHRFMVKDSVEESIYKLNRSR 556
            GLNLLEA+HVIL+EPLLNPAAEAQA+ RVHRIGQ+K T VHRF+V  +VEESIYKLNR++
Sbjct: 1496 GLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVHRFLVTGTVEESIYKLNRNK 1555

Query: 555  TA--STIISGNTKNQDQPVLSIKDVESLFSS--AIPAMPSEHENVPVESLMHLPPSVAAA 388
                S+  S NTKNQDQ  L+++D+ESLF+S  A  A   E+     E+L  LPPSVAAA
Sbjct: 1556 NTNLSSFSSRNTKNQDQQFLTLRDLESLFASPAAETAEMEENPGERQENLRDLPPSVAAA 1615

Query: 387  LAAERRWKGDLA 352
            LAAERR K   A
Sbjct: 1616 LAAERRIKESTA 1627