BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006509
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23985.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_002324371.1| glutamate-gated kainate-type ion channel rec...    73   3e-11
emb|CAN81029.1| hypothetical protein VITISV_020535 [Vitis vinifera]    72   7e-11
ref|XP_004159275.1| PREDICTED: glutamate receptor 2.5-like [Cucu...    71   1e-10
ref|XP_002308723.1| glutamate-gated kainate-type ion channel rec...    71   2e-10

>emb|CBI23985.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
 Frame = -3

Query: 583 DGFGFVFPIGSPLVSDISKAVLRVTEGKKLTEMEQAWFRPKTTCEEHQGTILT---LIYP 413
           DGFGF FPIGSPLV D+S+AVL VTEG ++  +E+ WF  KT+C +  G++L+   +   
Sbjct: 669 DGFGFAFPIGSPLVPDVSRAVLIVTEGNEMVRIEKKWFSEKTSCSDDNGSLLSSNNISLD 728

Query: 412 SFLQIFASISVFSFLIVL 359
           SF  +F    V S L ++
Sbjct: 729 SFWGLFLIAGVTSSLALI 746


>ref|XP_002324371.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222865805|gb|EEF02936.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 883

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
 Frame = -3

Query: 586  TDGFGFVFPIGSPLVSDISKAVLRVTEGKKLTEMEQAWFRPKTTCEEHQGTIL--TLIYP 413
            TDGFGF FP GSPLV D+S+AVL +TEG K+T++E AWF  ++ C +   ++   +L   
Sbjct: 741  TDGFGFAFPKGSPLVPDVSRAVLNITEGDKMTKIESAWFGKQSNCPDSSTSVTSNSLSLK 800

Query: 412  SFLQIFASISVFSFLIVLRVNFRKVKQH*RIYLKDLSIVVDLR 284
            SF  +F    V S L ++   F  V +  R  L+ L+  + +R
Sbjct: 801  SFWGLFLIAGVASLLALIIFMFMFVYKE-RKKLRPLNSTISIR 842


>emb|CAN81029.1| hypothetical protein VITISV_020535 [Vitis vinifera]
          Length = 971

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
 Frame = -3

Query: 583 DGFGFVFPIGSPLVSDISKAVLRVTEGKKLTEMEQAWFRPKTTCEEHQGTILT---LIYP 413
           DGFGF FPIGSPLV D+S+AVL VTEG ++ ++E+ WFR KT+C +  G+  +   +   
Sbjct: 765 DGFGFAFPIGSPLVRDVSRAVLIVTEGNEMVKIEKKWFREKTSCSDDNGSSRSSNNISLD 824

Query: 412 SFLQIFASISVFSFLIVL 359
           SF  +F    V S L ++
Sbjct: 825 SFWGLFLIAGVTSSLALI 842


>ref|XP_004159275.1| PREDICTED: glutamate receptor 2.5-like [Cucumis sativus]
          Length = 917

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
 Frame = -3

Query: 583  DGFGFVFPIGSPLVSDISKAVLRVTEGKKLTEMEQAWFRPKTTCEEHQGTILT---LIYP 413
            DGFGF FP+GSPLV D+S+A+L+VTEG ++ E+E AWF+    C   +   L+   L   
Sbjct: 786  DGFGFGFPVGSPLVPDVSRAILKVTEGDRIREIENAWFKKVKECSSSEAAELSSSRLTID 845

Query: 412  SFLQIFASISVFSFLIV 362
            SF  +F     FS L+V
Sbjct: 846  SFWVLFVITDGFSILLV 862


>ref|XP_002308723.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222854699|gb|EEE92246.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 866

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
 Frame = -3

Query: 586  TDGFGFVFPIGSPLVSDISKAVLRVTEGKKLTEMEQAWFRPKTTCEEHQGTIL--TLIYP 413
            T GFGFVFP GSPLV DIS+A+L VTEG ++ ++E AWF  K+TC E   +I   +L   
Sbjct: 752  TGGFGFVFPKGSPLVPDISRAILNVTEGDEMKQIEGAWFGKKSTCPESSSSISSNSLSLK 811

Query: 412  SFLQIF--ASISVFSFLIVLRVNF 347
            SF  +F  A ++    LI+  V F
Sbjct: 812  SFWGLFLLAGLAALLALIIFIVMF 835