BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006485
         (1718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloropl...   326   1e-86
ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, ch...   323   7e-86
emb|CBI23087.3| unnamed protein product [Vitis vinifera]              321   3e-85
ref|XP_002317839.1| predicted protein [Populus trichocarpa] gi|2...   313   9e-83
ref|XP_003526761.1| PREDICTED: 30S ribosomal protein 1, chloropl...   313   1e-82

>ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like [Vitis
           vinifera]
          Length = 298

 Score =  326 bits (836), Expect = 1e-86
 Identities = 162/241 (67%), Positives = 195/241 (80%), Gaps = 3/241 (1%)
 Frame = +2

Query: 233 SSKNKRPHVVNMSWDGPLSSVKLILQGKNIELSDAIKKHVEEKVGKAVLKHTHLVREIDA 412
           +++  +P  V MSWDGPLSSVKLILQGKN+EL+D ++ HVEEKVGKAV KH+HLVRE+D 
Sbjct: 58  TTRQTKPLAVRMSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDV 117

Query: 413 RVSVRGGDL-KGQKLSRCEVTLFTKKHGVVRAEEDAETLYGSIDLVSSIIQRKLRKIKEK 589
           R+S+RGG+L KG K+ RCEVTLFTKKHGVVRAEE AETLYGSID+VSSIIQRKLRKIKEK
Sbjct: 118 RLSIRGGELGKGPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEK 177

Query: 590 GTDHGRHMKGFHRSNVRDPEAPIXXXXXXXXXXXXXFDY--QLVRTKYFEMPPLTVAEAL 763
            +DHGRHMKGF+R  VRDPE P+              D   ++VRTKYF+MPPLTV EA+
Sbjct: 178 DSDHGRHMKGFNRLKVRDPETPLVEEEADVVPQKEDGDLINEIVRTKYFDMPPLTVPEAV 237

Query: 764 EQLELVDHDFYGFRNEKSGEINIVYKRKHGGYGLIVPKGGGKAEKIDDLVKEGAR*PSVT 943
           EQLE VDHDF+GFRNE++GEINI+YKRK GGYGLI+PK  GK E+++ +V +  R PS+ 
Sbjct: 238 EQLENVDHDFFGFRNEETGEINILYKRKAGGYGLIIPKENGKTEELEPVVVKSDREPSLA 297

Query: 944 E 946
           E
Sbjct: 298 E 298


>ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, chloroplast precursor,
           putative [Ricinus communis] gi|223536311|gb|EEF37962.1|
           Plastid-specific 30S ribosomal protein 1, chloroplast
           precursor, putative [Ricinus communis]
          Length = 311

 Score =  323 bits (829), Expect = 7e-86
 Identities = 164/246 (66%), Positives = 196/246 (79%), Gaps = 6/246 (2%)
 Frame = +2

Query: 227 YISSKNKRPHVVNMSWDGPLSSVKLILQGKNIELSDAIKKHVEEKVGKAVLKHTHLVREI 406
           Y  +K  R   V MSW+GPLSSVKLI QGKN+EL+D +KKHVE+KVGKAV KH+HLVRE+
Sbjct: 66  YFENKRGRRSAVRMSWEGPLSSVKLITQGKNLELTDTVKKHVEDKVGKAVQKHSHLVREV 125

Query: 407 DARVSVRGGDL-KGQKLSRCEVTLFTKKHGVVRAEEDAETLYGSIDLVSSIIQRKLRKIK 583
           D R+SVRGG+  KG K+ RCEVTLFTKKHGV+RAEEDAET+Y SIDLVSSIIQRKLRKIK
Sbjct: 126 DVRLSVRGGEFGKGPKIRRCEVTLFTKKHGVIRAEEDAETIYASIDLVSSIIQRKLRKIK 185

Query: 584 EKGTDHGRHMKGFHRSNVRDPEA-PIXXXXXXXXXXXXXFDY----QLVRTKYFEMPPLT 748
           EK +DHGRHMKGF+R  VR+P A P+              D     ++VRTKYF+MPPLT
Sbjct: 186 EKVSDHGRHMKGFNRLKVREPVAEPVKDDTDEVDGVLGDEDEDYIDEVVRTKYFDMPPLT 245

Query: 749 VAEALEQLELVDHDFYGFRNEKSGEINIVYKRKHGGYGLIVPKGGGKAEKIDDLVKEGAR 928
           V+EA+EQL+ VDHDFYGFRNE++GEINI+YKRK GGYG+I+PK  GKAEK++ +V E AR
Sbjct: 246 VSEAIEQLKNVDHDFYGFRNEETGEINIIYKRKAGGYGIIIPKENGKAEKLEPVVIEPAR 305

Query: 929 *PSVTE 946
            PS+ E
Sbjct: 306 EPSIAE 311


>emb|CBI23087.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  321 bits (823), Expect = 3e-85
 Identities = 160/230 (69%), Positives = 189/230 (82%), Gaps = 3/230 (1%)
 Frame = +2

Query: 266 MSWDGPLSSVKLILQGKNIELSDAIKKHVEEKVGKAVLKHTHLVREIDARVSVRGGDL-K 442
           MSWDGPLSSVKLILQGKN+EL+D ++ HVEEKVGKAV KH+HLVRE+D R+S+RGG+L K
Sbjct: 1   MSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGK 60

Query: 443 GQKLSRCEVTLFTKKHGVVRAEEDAETLYGSIDLVSSIIQRKLRKIKEKGTDHGRHMKGF 622
           G K+ RCEVTLFTKKHGVVRAEE AETLYGSID+VSSIIQRKLRKIKEK +DHGRHMKGF
Sbjct: 61  GPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGF 120

Query: 623 HRSNVRDPEAPIXXXXXXXXXXXXXFDY--QLVRTKYFEMPPLTVAEALEQLELVDHDFY 796
           +R  VRDPE P+              D   ++VRTKYF+MPPLTV EA+EQLE VDHDF+
Sbjct: 121 NRLKVRDPETPLVEEEADVVPQKEDGDLINEIVRTKYFDMPPLTVPEAVEQLENVDHDFF 180

Query: 797 GFRNEKSGEINIVYKRKHGGYGLIVPKGGGKAEKIDDLVKEGAR*PSVTE 946
           GFRNE++GEINI+YKRK GGYGLI+PK  GK E+++ +V +  R PS+ E
Sbjct: 181 GFRNEETGEINILYKRKAGGYGLIIPKENGKTEELEPVVVKSDREPSLAE 230


>ref|XP_002317839.1| predicted protein [Populus trichocarpa] gi|222858512|gb|EEE96059.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  313 bits (802), Expect = 9e-83
 Identities = 157/232 (67%), Positives = 189/232 (81%), Gaps = 3/232 (1%)
 Frame = +2

Query: 260 VNMSWDGPLSSVKLILQGKNIELSDAIKKHVEEKVGKAVLKHTHLVREIDARVSVRGGDL 439
           V MSWDGPL SVKLI+QGKN+EL+D +K+HVE+KVGKAV KH+HLVRE+D R+SVRGG+L
Sbjct: 75  VKMSWDGPLHSVKLIIQGKNLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGGEL 134

Query: 440 -KGQKLSRCEVTLFTKKHGVVRAEEDAETLYGSIDLVSSIIQRKLRKIKEKGTDHGRHMK 616
            KG ++ RCEVTLFT +HGVVRAEEDAET+Y SIDLVSSIIQRKLRKIKEK +DHGRHMK
Sbjct: 135 GKGPRIRRCEVTLFTNRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMK 194

Query: 617 GFHRSNVRDPEAPIXXXXXXXXXXXXXFDY--QLVRTKYFEMPPLTVAEALEQLELVDHD 790
           GF+R  VR+P   +              D   ++VRTK+F+MPPLTV+EA+EQLE VDHD
Sbjct: 195 GFNRLKVREPVPQVVEGDADEVSQQEVEDSIEEVVRTKFFDMPPLTVSEAIEQLENVDHD 254

Query: 791 FYGFRNEKSGEINIVYKRKHGGYGLIVPKGGGKAEKIDDLVKEGAR*PSVTE 946
           FYGFRNE++GEINIVYKRK GGYGLI+PKG  +AE+++ LV E AR  S+ E
Sbjct: 255 FYGFRNEETGEINIVYKRKAGGYGLIIPKGNDEAERLEPLVVEPARESSLAE 306


>ref|XP_003526761.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like [Glycine
           max]
          Length = 291

 Score =  313 bits (801), Expect = 1e-82
 Identities = 160/242 (66%), Positives = 192/242 (79%), Gaps = 4/242 (1%)
 Frame = +2

Query: 233 SSKNKRPHVVNMSWDGPLSSVKLILQGKNIELSDAIKKHVEEKVGKAVLKHTHLVREIDA 412
           +S   R     MSWDGPLSSVKLI+QGKN+EL+DA+K+HVE+KVGKAV KH+HLVRE+D 
Sbjct: 50  TSNRGRSLSTRMSWDGPLSSVKLIIQGKNLELTDAVKQHVEDKVGKAVQKHSHLVREVDV 109

Query: 413 RVSVRGGDL--KGQKLSRCEVTLFTKKHGVVRAEEDAETLYGSIDLVSSIIQRKLRKIKE 586
           R+S+RGG    +G +  RCEVTLFTK+HGVVRAEEDAE+ YGSIDLVSSIIQRKLRKIKE
Sbjct: 110 RLSIRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKE 169

Query: 587 KGTDHGRHMKGFHRSNVRDP--EAPIXXXXXXXXXXXXXFDYQLVRTKYFEMPPLTVAEA 760
           K +DHGRHMKGF+R  VR+P  + P+                ++VRTKYF+MPPLTVAEA
Sbjct: 170 KVSDHGRHMKGFNRLKVREPVEQLPMEEDEILSPREEEESIDEVVRTKYFDMPPLTVAEA 229

Query: 761 LEQLELVDHDFYGFRNEKSGEINIVYKRKHGGYGLIVPKGGGKAEKIDDLVKEGAR*PSV 940
           +EQLE VDHDFYGFRNE++GEINIVYKRK GGYGLI+PKG G+AEK++ +V E A   S+
Sbjct: 230 IEQLENVDHDFYGFRNEETGEINIVYKRKEGGYGLIIPKGDGEAEKLESVVLEPAIESSL 289

Query: 941 TE 946
            E
Sbjct: 290 KE 291