BLASTX nr result

ID: Cimicifuga21_contig00006483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006483
         (2850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vi...   420   e-114
gb|ACI13681.1| putative auxin response factor ARF16 [Malus x dom...   414   e-113
ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vi...   412   e-112
ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Gl...   407   e-111
ref|XP_002519531.1| Auxin response factor, putative [Ricinus com...   405   e-110

>ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 711

 Score =  420 bits (1079), Expect = e-114
 Identities = 209/279 (74%), Positives = 232/279 (83%), Gaps = 3/279 (1%)
 Frame = -1

Query: 828 SDKCLDSQLWHACAGGMVQMPLLNSKVFYFPQGHAEHSHASVDFGIFPRIPPYILSRVLD 649
           ++K LDSQLWHACAGGMVQMPL++SKVFYFPQGHAEH+H +VDF   PRIP  +L RV  
Sbjct: 4   TEKSLDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEHAHTNVDFAAAPRIPALVLCRVAA 63

Query: 648 VKFLADPDTDEVYAKIRLVPLNNNDPHDYDTNNHGTT-PDVPDKPASFAKTLTQSDANNG 472
           VKF+ADP+TDEVYAKIRLVP+ NN+    D    G++  + P+KPASFAKTLTQSDANNG
Sbjct: 64  VKFMADPETDEVYAKIRLVPIANNELDCEDDGVMGSSGSEAPEKPASFAKTLTQSDANNG 123

Query: 471 GGFSVPRYCAETIFPRLDYTADPPVQTVLAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 292
           GGFSVPRYCAETIFPRLDY+ADPPVQTV+AKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF
Sbjct: 124 GGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 183

Query: 291 VNQKKLVAGDSIVFLRTENGDLCVGIRRAKRAIAGGPESPSGWNPAAGNCVSPYGGYSAF 112
           VNQKKLVAGDSIVFLR ENGDLCVGIRRAKR IAGGPESPSGWNPA     SPY G+  F
Sbjct: 184 VNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGGPESPSGWNPA-----SPYAGFPKF 238

Query: 111 LREDESKIMRXXXXXXXXXXXGFKVKG--KVRPESVIEA 1
           LREDESK+MR           G  ++G  +VRPESV+EA
Sbjct: 239 LREDESKLMRNGVGGNSNPGSGGGLRGGRRVRPESVVEA 277


>gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score =  414 bits (1065), Expect = e-113
 Identities = 209/294 (71%), Positives = 227/294 (77%), Gaps = 1/294 (0%)
 Frame = -1

Query: 879 MIAFTDSATVKEPIVMTSDKCLDSQLWHACAGGMVQMPLLNSKVFYFPQGHAEHSHASVD 700
           MI F DS   KE +    D+CLD QLWHACAGGMVQMP +N+KVFYFPQGHAEH+   VD
Sbjct: 1   MITFMDS---KEKL-KEGDRCLDPQLWHACAGGMVQMPPVNAKVFYFPQGHAEHACGPVD 56

Query: 699 FGIFPRIPPYILSRVLDVKFLADPDTDEVYAKIRLVPLNNNDPHDYDTNNHGTT-PDVPD 523
           F   PR+P +IL RV  +KF+ADP TDEVYAKIRLVPLN  +    D    G    + PD
Sbjct: 57  FRNCPRVPAHILCRVAAIKFMADPGTDEVYAKIRLVPLNGAEAGYEDDGIGGLNGTETPD 116

Query: 522 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVLAKDVHGEIWKFRHI 343
           KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDY+ADPPVQT+LAKDVHGE WKFRHI
Sbjct: 117 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHI 176

Query: 342 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTENGDLCVGIRRAKRAIAGGPESPSGW 163
           YRGTPRRHLLTTG STFVN KKLV+GDSIVFLR ENGDLCVGIRRAKR I GG ES SGW
Sbjct: 177 YRGTPRRHLLTTGSSTFVNHKKLVSGDSIVFLRAENGDLCVGIRRAKRGIGGGSESSSGW 236

Query: 162 NPAAGNCVSPYGGYSAFLREDESKIMRXXXXXXXXXXXGFKVKGKVRPESVIEA 1
           NP  GNC  PYGG+SAFLREDE+K+M+               KGKV PESV EA
Sbjct: 237 NPMGGNCTVPYGGFSAFLREDENKLMKNGHGNGSNSNGSLMGKGKVGPESVFEA 290


>ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 701

 Score =  412 bits (1059), Expect = e-112
 Identities = 202/274 (73%), Positives = 223/274 (81%)
 Frame = -1

Query: 822 KCLDSQLWHACAGGMVQMPLLNSKVFYFPQGHAEHSHASVDFGIFPRIPPYILSRVLDVK 643
           KCL+ QLWHACAGGMVQMP +NSKVFYFPQGHAEH+ ASVDF  +PRIP YI  RV  +K
Sbjct: 16  KCLNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVDFRNYPRIPAYIPCRVSAMK 75

Query: 642 FLADPDTDEVYAKIRLVPLNNNDPHDYDTNNHGTTPDVPDKPASFAKTLTQSDANNGGGF 463
           F+ADP++DEVYAKI LVPLN ++  DYD + +G   +  +KPASFAKTLTQSDANNGGGF
Sbjct: 76  FMADPESDEVYAKITLVPLNGSES-DYDDDGYGNGTESQEKPASFAKTLTQSDANNGGGF 134

Query: 462 SVPRYCAETIFPRLDYTADPPVQTVLAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQ 283
           SVPRYCAETIFPRLDYTADPPVQ +LAKDVHGE WKFRHIYRGTPRRHLLTTGWSTFVN 
Sbjct: 135 SVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNH 194

Query: 282 KKLVAGDSIVFLRTENGDLCVGIRRAKRAIAGGPESPSGWNPAAGNCVSPYGGYSAFLRE 103
           KKL+AGDSIVFLR ENGDLCVGIRRAKR I  GPES SGWNPA  N V PYGG+SAFLRE
Sbjct: 195 KKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCGPESSSGWNPAGCNYVMPYGGFSAFLRE 254

Query: 102 DESKIMRXXXXXXXXXXXGFKVKGKVRPESVIEA 1
           DE+K+ R            F  + KV  E+VIEA
Sbjct: 255 DENKLTRNGNGGSSGSNGSFFGRVKVTAEAVIEA 288


>ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 647

 Score =  407 bits (1046), Expect = e-111
 Identities = 198/293 (67%), Positives = 231/293 (78%)
 Frame = -1

Query: 879 MIAFTDSATVKEPIVMTSDKCLDSQLWHACAGGMVQMPLLNSKVFYFPQGHAEHSHASVD 700
           MI F D+    + +    ++CLD QLWHACAGGMVQMP +N+KV+YFPQGHAEH+   V+
Sbjct: 1   MITFMDTKEKLKEV----ERCLDPQLWHACAGGMVQMPTVNTKVYYFPQGHAEHACGPVN 56

Query: 699 FGIFPRIPPYILSRVLDVKFLADPDTDEVYAKIRLVPLNNNDPHDYDTNNHGTTPDVPDK 520
           F   P++PP++  RV+ VK++ADP+TDEVYAK++LVPLN ND  DYD +  G   +  DK
Sbjct: 57  FKTCPKVPPFVPCRVVAVKYMADPETDEVYAKLKLVPLNANDV-DYDHDVIGA--ETRDK 113

Query: 519 PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVLAKDVHGEIWKFRHIY 340
           PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDY+ADPPVQ +LAKDVHGE WKFRHIY
Sbjct: 114 PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIY 173

Query: 339 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTENGDLCVGIRRAKRAIAGGPESPSGWN 160
           RGTPRRHLLTTGWSTFVN KKLVAGDSIVFLR ENGDLCVGIRRAK+ I GG E+ SGWN
Sbjct: 174 RGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGLETSSGWN 233

Query: 159 PAAGNCVSPYGGYSAFLREDESKIMRXXXXXXXXXXXGFKVKGKVRPESVIEA 1
           PA GN   PY G+S FLRED+++I+R               KGKVRPE++IEA
Sbjct: 234 PAGGNFPMPYSGFSPFLREDDNRILRNGNSNGLNPSVSMMGKGKVRPEAIIEA 286


>ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
           gi|223541394|gb|EEF42945.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 702

 Score =  405 bits (1042), Expect = e-110
 Identities = 199/279 (71%), Positives = 223/279 (79%), Gaps = 4/279 (1%)
 Frame = -1

Query: 825 DKCLDSQLWHACAGGMVQMPLLNSKVFYFPQGHAEHSHASVDFGIFPRIPPYILSRVLDV 646
           +KCLDSQLWHACAGGMVQMP +N+KVFYFPQGHAEH+  SVDF  FPR+PPYIL RV  +
Sbjct: 17  EKCLDSQLWHACAGGMVQMPAVNTKVFYFPQGHAEHASGSVDFRNFPRLPPYILCRVSGI 76

Query: 645 KFLADPDTDEVYAKIRLVPL----NNNDPHDYDTNNHGTTPDVPDKPASFAKTLTQSDAN 478
           KF+ADP+TDEVYAKI+L P+    N  +  +    N G   +  +KPASFAKTLTQSDAN
Sbjct: 77  KFMADPETDEVYAKIKLTPICSKENGMEDEEEGVINGGEGQE--NKPASFAKTLTQSDAN 134

Query: 477 NGGGFSVPRYCAETIFPRLDYTADPPVQTVLAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 298
           NGGGFSVPRYCAETIFPRLDY+ADPPVQT+LAKDVHGE WKFRHIYRGTPRRHLLTTGWS
Sbjct: 135 NGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWS 194

Query: 297 TFVNQKKLVAGDSIVFLRTENGDLCVGIRRAKRAIAGGPESPSGWNPAAGNCVSPYGGYS 118
           TFVN KKLVAGDSIVFLR ENGDLC+GIRRAKR + GGPE  S WNPA GNCV PYGG++
Sbjct: 195 TFVNHKKLVAGDSIVFLRAENGDLCIGIRRAKRGVGGGPE--SSWNPAGGNCVMPYGGFN 252

Query: 117 AFLREDESKIMRXXXXXXXXXXXGFKVKGKVRPESVIEA 1
           +F RED +K+ R               KGKV+ ESVIEA
Sbjct: 253 SFFREDGNKLSR-SGNGNGPGENALTGKGKVKAESVIEA 290


Top