BLASTX nr result

ID: Cimicifuga21_contig00006476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006476
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313412.1| copper transporter [Populus trichocarpa] gi|...   175   7e-42
emb|CBI16036.3| unnamed protein product [Vitis vinifera]              170   2e-40
ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinif...   170   2e-40
ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinif...   168   7e-40
ref|XP_002313411.1| copper transporter [Populus trichocarpa] gi|...   160   2e-37

>ref|XP_002313412.1| copper transporter [Populus trichocarpa]
           gi|222849820|gb|EEE87367.1| copper transporter [Populus
           trichocarpa]
          Length = 155

 Score =  175 bits (443), Expect = 7e-42
 Identities = 79/119 (66%), Positives = 100/119 (84%)
 Frame = -3

Query: 491 FFWGKNASILFTGWPGTSTGMYLLSLFIVFMLSMSIEWLSHSRFVKHGSSHVSAGLLQTL 312
           FFWGK+  ILF+GWPGTSTGMY+L+L  +F+L++ +EWLSH R VK GS++V+AGL+Q L
Sbjct: 34  FFWGKDTLILFSGWPGTSTGMYVLALVFIFVLAVLVEWLSHCRLVKPGSNNVAAGLIQAL 93

Query: 311 LHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFLVFGSRLFKPEEVVQYEKQRDLPP 135
           +H +RVGL+Y+VMLAVMSFNGGVF+VAVAGH VGF +FGSR+FK  E+  Y K  DLPP
Sbjct: 94  MHAVRVGLAYMVMLAVMSFNGGVFIVAVAGHLVGFFIFGSRVFKDTEMPPYHKTSDLPP 152


>emb|CBI16036.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  170 bits (430), Expect = 2e-40
 Identities = 86/155 (55%), Positives = 112/155 (72%), Gaps = 4/155 (2%)
 Frame = -3

Query: 578 DHGTMGGHDMPPSHNNGXXXXXXXXXXXT---FFWGKNASILFTGWPGTSTGMYLLSLFI 408
           DHG M  H  PP  N+                F+WGK A ILF+GWPGT +GMY L+L +
Sbjct: 8   DHGHM--HMSPPPANSTGMPPMHHMEMMMHMTFYWGKKAEILFSGWPGTRSGMYALALIV 65

Query: 407 VFMLSMSIEWLSHSRFVKHGSSHVSAGLLQTLLHMIRVGLSYLVMLAVMSFNGGVFLVAV 228
           VF++++ +EWLSH + +K GS+HV+AG++QTLLH IR+GL Y+VMLA+MSFNGG+FLVAV
Sbjct: 66  VFVMAIIVEWLSHFQLIKPGSTHVAAGVVQTLLHAIRMGLEYMVMLALMSFNGGMFLVAV 125

Query: 227 AGHSVGFLVFGSRLFKPEEVVQ-YEKQRDLPPMTC 126
           AGH+VGFLVFGSRLF+  E ++  EK   L PM+C
Sbjct: 126 AGHAVGFLVFGSRLFRGSETLRPSEKAFYLSPMSC 160


>ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinifera]
           gi|321496076|gb|ADW93915.1| copper transporter [Vitis
           vinifera]
          Length = 177

 Score =  170 bits (430), Expect = 2e-40
 Identities = 86/155 (55%), Positives = 112/155 (72%), Gaps = 4/155 (2%)
 Frame = -3

Query: 578 DHGTMGGHDMPPSHNNGXXXXXXXXXXXT---FFWGKNASILFTGWPGTSTGMYLLSLFI 408
           DHG M  H  PP  N+                F+WGK A ILF+GWPGT +GMY L+L +
Sbjct: 25  DHGHM--HMSPPPANSTGMPPMHHMEMMMHMTFYWGKKAEILFSGWPGTRSGMYALALIV 82

Query: 407 VFMLSMSIEWLSHSRFVKHGSSHVSAGLLQTLLHMIRVGLSYLVMLAVMSFNGGVFLVAV 228
           VF++++ +EWLSH + +K GS+HV+AG++QTLLH IR+GL Y+VMLA+MSFNGG+FLVAV
Sbjct: 83  VFVMAIIVEWLSHFQLIKPGSTHVAAGVVQTLLHAIRMGLEYMVMLALMSFNGGMFLVAV 142

Query: 227 AGHSVGFLVFGSRLFKPEEVVQ-YEKQRDLPPMTC 126
           AGH+VGFLVFGSRLF+  E ++  EK   L PM+C
Sbjct: 143 AGHAVGFLVFGSRLFRGSETLRPSEKAFYLSPMSC 177


>ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496078|gb|ADW93916.1| copper transporter [Vitis
           vinifera]
          Length = 151

 Score =  168 bits (426), Expect = 7e-40
 Identities = 76/118 (64%), Positives = 98/118 (83%)
 Frame = -3

Query: 491 FFWGKNASILFTGWPGTSTGMYLLSLFIVFMLSMSIEWLSHSRFVKHGSSHVSAGLLQTL 312
           F+WGK A ILF+GWPG  +GMY L+L +VF++ + +EWLS+ R +K GS+H +AGL+QTL
Sbjct: 34  FYWGKEAEILFSGWPGARSGMYALALIVVFVMGIIVEWLSYCRLIKPGSTHAAAGLVQTL 93

Query: 311 LHMIRVGLSYLVMLAVMSFNGGVFLVAVAGHSVGFLVFGSRLFKPEEVVQYEKQRDLP 138
           LH IR+GL+Y+VMLA+MSFNGGVFLVAVAGH+VGFLVFGSR+ +  E+V  EK  DLP
Sbjct: 94  LHTIRIGLAYMVMLALMSFNGGVFLVAVAGHAVGFLVFGSRVCRGSEMVSLEKTSDLP 151


>ref|XP_002313411.1| copper transporter [Populus trichocarpa]
           gi|118485983|gb|ABK94836.1| unknown [Populus
           trichocarpa] gi|222849819|gb|EEE87366.1| copper
           transporter [Populus trichocarpa]
          Length = 162

 Score =  160 bits (404), Expect = 2e-37
 Identities = 83/154 (53%), Positives = 105/154 (68%), Gaps = 5/154 (3%)
 Frame = -3

Query: 572 GTMGGHDMPPSHNNGXXXXXXXXXXXT--FFWGKNASILFTGWPGTSTG---MYLLSLFI 408
           G MGG   PP  N                FFWGK+  ILF+GWPG+S     MY ++L  
Sbjct: 11  GGMGGMAPPPPMNMAGTMQHHEMMMMHMTFFWGKSTEILFSGWPGSSDKRPHMYFVALLF 70

Query: 407 VFMLSMSIEWLSHSRFVKHGSSHVSAGLLQTLLHMIRVGLSYLVMLAVMSFNGGVFLVAV 228
           VF+LS+ +EWLSH + +K GS+HV+AGL+QTLLH +RVGL+Y+VMLA+MSFNGGVFL AV
Sbjct: 71  VFVLSILVEWLSHCQLMKPGSNHVAAGLVQTLLHALRVGLAYMVMLAIMSFNGGVFLAAV 130

Query: 227 AGHSVGFLVFGSRLFKPEEVVQYEKQRDLPPMTC 126
           AGH++GFL FGSR+FK  +     K  DLPP +C
Sbjct: 131 AGHTLGFLFFGSRVFKRTQ--NPAKTSDLPPSSC 162


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