BLASTX nr result

ID: Cimicifuga21_contig00006457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006457
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304589.1| nbs-lrr resistance protein [Populus trichoca...    74   1e-11
emb|CBI24547.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002265241.1| PREDICTED: probable disease resistance prote...    67   2e-09
ref|XP_002334697.1| nbs-lrr resistance protein [Populus trichoca...    63   3e-08
ref|XP_002336034.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08

>ref|XP_002304589.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222842021|gb|EEE79568.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 896

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 64/200 (32%), Positives = 93/200 (46%), Gaps = 42/200 (21%)
 Frame = -1

Query: 476  LPKEIGELILLQYLDLSGTGLRRLPSFIGNLVKLQTLDLRDNLEMENIDGASFICKMKLL 297
            +P  IGELI L YL L  T +R LPS +G+L  LQTLD+  NL +  I     IC MK L
Sbjct: 594  IPSTIGELIHLSYLGLKETNIRVLPSTLGSLCNLQTLDIAGNLHLRIIPDV--ICNMKNL 651

Query: 296  RHLYLD------------QHIYSIGDVVIE--------------------NLPRDLLTLW 213
            RHLY+             +H+ ++ ++ +                     NL  D + ++
Sbjct: 652  RHLYMCGHSGGHLRIDTLKHLQTLTEIDVSRWKQNNTADLVSLRKLGIRGNLCSDTIKIF 711

Query: 212  IN-------SSIWMSMDGRFSKAFVQFDRLRSL---RLDGKIVGDEKLQDCFPSSLIELT 63
             +        S+++  +G    + VQ   LRSL    L G I      QD FP +L +LT
Sbjct: 712  DSISALLQLRSLYLRAEGAEFPSLVQLGSLRSLIKLHLRGGISQLPSQQD-FPPNLSQLT 770

Query: 62   LWYCELEGDLWSVLGSLPKL 3
            L + +LE +   +L  LPKL
Sbjct: 771  LEHTQLEQESIEILEKLPKL 790


>emb|CBI24547.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 61/170 (35%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
 Frame = -1

Query: 476 LPKEIGELILLQYLDLSGTGLRRLPSFIGNLVKLQTLDLRDNLEMENIDGASFICKMKLL 297
           LPKEIGELI L+Y+ L G    RLP  IG LV LQTLD R       I  +  + ++  L
Sbjct: 348 LPKEIGELIRLKYMRLRGGHGLRLPESIGRLVNLQTLDCR----FGKIPWS--VWRLHQL 401

Query: 296 RHLY-----------LDQHIYSIGDVVIENLPRDLLTLWINSSIWMSMDGRFSKAFVQFD 150
           RHLY           + + +   GD+ I +L  +L TL +    W+  DG       +  
Sbjct: 402 RHLYGYYSTVLSRPMMSRCLTFNGDLSI-HLLTNLQTLKLAPGPWLE-DG-----LGKLP 454

Query: 149 RLRSLRL-DGKIVGDEKLQDCFPSSLIELTLWYCELEGDLWSVLGSLPKL 3
           +L+ LR+ DG+     +L   +P +L++LTL  C+LE D    L  LP L
Sbjct: 455 QLKKLRITDGRFKNSSEL---YPENLMKLTLQNCDLEEDPMLTLKKLPNL 501


>ref|XP_002265241.1| PREDICTED: probable disease resistance protein RXW24L [Vitis
            vinifera]
          Length = 841

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 61/170 (35%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
 Frame = -1

Query: 476  LPKEIGELILLQYLDLSGTGLRRLPSFIGNLVKLQTLDLRDNLEMENIDGASFICKMKLL 297
            LPKEIGELI L+Y+ L G    RLP  IG LV LQTLD R       I  +  + ++  L
Sbjct: 582  LPKEIGELIRLKYMRLRGGHGLRLPESIGRLVNLQTLDCR----FGKIPWS--VWRLHQL 635

Query: 296  RHLY-----------LDQHIYSIGDVVIENLPRDLLTLWINSSIWMSMDGRFSKAFVQFD 150
            RHLY           + + +   GD+ I +L  +L TL +    W+  DG       +  
Sbjct: 636  RHLYGYYSTVLSRPMMSRCLTFNGDLSI-HLLTNLQTLKLAPGPWLE-DG-----LGKLP 688

Query: 149  RLRSLRL-DGKIVGDEKLQDCFPSSLIELTLWYCELEGDLWSVLGSLPKL 3
            +L+ LR+ DG+     +L   +P +L++LTL  C+LE D    L  LP L
Sbjct: 689  QLKKLRITDGRFKNSSEL---YPENLMKLTLQNCDLEEDPMLTLKKLPNL 735


>ref|XP_002334697.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222874531|gb|EEF11662.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 910

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 42/200 (21%)
 Frame = -1

Query: 476  LPKEIGELILLQYLDLSGTGLRRLPSFIGNLVKLQTLDLRDNLEMENIDGASFICKMKLL 297
            +P  IG+LI L YL L  T ++ LPS +G+L  LQTLD+  NL +  +   + I  M+ L
Sbjct: 608  IPSTIGDLIHLSYLGLKETNIQVLPSTLGSLCNLQTLDIARNLHLRIV--PNVIWNMRNL 665

Query: 296  RHLYLD------------QHIYSIGDVVIE--------------------NLPRDLLTLW 213
            RHLY+             +H+ ++  + +                     NL  D + ++
Sbjct: 666  RHLYMCGQSGGFLRIDNLKHLQTLSGIDVSRWKQNNSAHLTSLRKLKMRGNLSLDTIAIF 725

Query: 212  IN-------SSIWMSMDGRFSKAFVQFDRLRS---LRLDGKIVGDEKLQDCFPSSLIELT 63
             +        S+++  +G       Q   L S   L L G I     LQ+ FP +L +LT
Sbjct: 726  DSISALLQLRSLYLRAEGAEFPTLSQLGSLHSLVKLHLKGGITRLPSLQE-FPPNLSQLT 784

Query: 62   LWYCELEGDLWSVLGSLPKL 3
            L Y  LE     VL  LPKL
Sbjct: 785  LEYTHLEQVSIEVLEKLPKL 804


>ref|XP_002336034.1| predicted protein [Populus trichocarpa] gi|222839536|gb|EEE77873.1|
           predicted protein [Populus trichocarpa]
          Length = 542

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 42/200 (21%)
 Frame = -1

Query: 476 LPKEIGELILLQYLDLSGTGLRRLPSFIGNLVKLQTLDLRDNLEMENIDGASFICKMKLL 297
           +P  IG+LI L YL L  T ++ LPS +G+L  LQTLD+  NL +  +   + I  M+ L
Sbjct: 240 IPSTIGDLIHLSYLGLKETNIQVLPSTLGSLCNLQTLDIARNLHLRIV--PNVIWNMRNL 297

Query: 296 RHLYLD------------QHIYSIGDVVIE--------------------NLPRDLLTLW 213
           RHLY+             +H+ ++  + +                     NL  D + ++
Sbjct: 298 RHLYMCGQSGGFLRIDNLKHLQTLSGIDVSRWKQNNSAHLTSLRKLKMRGNLSLDTIAIF 357

Query: 212 IN-------SSIWMSMDGRFSKAFVQFDRLRS---LRLDGKIVGDEKLQDCFPSSLIELT 63
            +        S+++  +G       Q   L S   L L G I     LQ+ FP +L +LT
Sbjct: 358 DSISALLQLRSLYLRAEGAEFPTLSQLGSLHSLVKLHLKGGITRLPSLQE-FPPNLSQLT 416

Query: 62  LWYCELEGDLWSVLGSLPKL 3
           L Y  LE     VL  LPKL
Sbjct: 417 LEYTHLEQVSIEVLEKLPKL 436


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