BLASTX nr result

ID: Cimicifuga21_contig00006448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006448
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX94424.1| ribosomal protein L32 (chloroplast) [Allium fistu...    62   3e-07
gb|AGE93418.1| ribosomal protein L32 [Alpinia zerumbet]                61   4e-07
gb|AEX94448.1| ribosomal protein L32 (chloroplast) [Eriospermum ...    61   5e-07
gb|AEX94432.1| ribosomal protein L32 (chloroplast) [Aphyllanthes...    61   5e-07
ref|YP_007353963.1| ribosomal protein L32 (chloroplast) [Tectona...    60   7e-07

>gb|AEX94424.1| ribosomal protein L32 (chloroplast) [Allium fistulosum]
           gi|372481504|gb|AEX94425.1| ribosomal protein L32
           (chloroplast) [Allium cepa]
          Length = 57

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 31/54 (57%), Positives = 35/54 (64%)
 Frame = +3

Query: 423 MAVPXXXXXXXXXXXXXNFWKRKANVAAKKAFSLAKSISTGNSKSFFVPPTNKE 584
           MAVP             N WK+K N+ A KAFSLAKS+STGNSKSFFV  TNK+
Sbjct: 1   MAVPKKRTSISKKRIRRNIWKKKGNLVALKAFSLAKSVSTGNSKSFFVRQTNKK 54


>gb|AGE93418.1| ribosomal protein L32 [Alpinia zerumbet]
          Length = 57

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 31/54 (57%), Positives = 35/54 (64%)
 Frame = +3

Query: 423 MAVPXXXXXXXXXXXXXNFWKRKANVAAKKAFSLAKSISTGNSKSFFVPPTNKE 584
           MAVP             N WK+K N+AA KAFSLAKS+STG SKSFFV  TNK+
Sbjct: 1   MAVPKKRTSMSKKRIRKNIWKKKGNLAAVKAFSLAKSVSTGRSKSFFVQQTNKK 54


>gb|AEX94448.1| ribosomal protein L32 (chloroplast) [Eriospermum cervicorne]
           gi|372481557|gb|AEX94451.1| ribosomal protein L32
           (chloroplast) [Ruscus aculeatus]
          Length = 57

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 31/54 (57%), Positives = 36/54 (66%)
 Frame = +3

Query: 423 MAVPXXXXXXXXXXXXXNFWKRKANVAAKKAFSLAKSISTGNSKSFFVPPTNKE 584
           MAVP             N WK+K  +AAKKAFSLAKS+STG+SKSFFV  TNK+
Sbjct: 1   MAVPKKRTSISKKRIRRNIWKKKGYLAAKKAFSLAKSVSTGDSKSFFVRQTNKK 54


>gb|AEX94432.1| ribosomal protein L32 (chloroplast) [Aphyllanthes monspeliensis]
          Length = 57

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 31/54 (57%), Positives = 36/54 (66%)
 Frame = +3

Query: 423 MAVPXXXXXXXXXXXXXNFWKRKANVAAKKAFSLAKSISTGNSKSFFVPPTNKE 584
           MAVP             N WK+K ++AA KAFSLAKS+STGNSKSFFV  TNK+
Sbjct: 1   MAVPKKRTSISKKRIRRNIWKKKGHLAAIKAFSLAKSVSTGNSKSFFVRQTNKK 54


>ref|YP_007353963.1| ribosomal protein L32 (chloroplast) [Tectona grandis]
           gi|438687652|emb|CCP47181.1| ribosomal protein L32
           (chloroplast) [Tectona grandis]
           gi|438688336|emb|CCP47270.1| ribosomal protein L32
           (chloroplast) [Tectona grandis]
           gi|438688460|emb|CCP47359.1| ribosomal protein L32
           (chloroplast) [Tectona grandis]
          Length = 58

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 33/56 (58%), Positives = 35/56 (62%)
 Frame = +3

Query: 423 MAVPXXXXXXXXXXXXXNFWKRKANVAAKKAFSLAKSISTGNSKSFFVPPTNKESS 590
           MAVP             NFWKRK   AA KAFSL KS+STGNSKSFFV  TNK S+
Sbjct: 1   MAVPKKRTSASKKRIRKNFWKRKGYWAALKAFSLGKSLSTGNSKSFFVRQTNKLSN 56


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