BLASTX nr result

ID: Cimicifuga21_contig00006415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006415
         (1356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517154.1| conserved hypothetical protein [Ricinus comm...   348   2e-93
ref|XP_003562547.1| PREDICTED: TVP38/TMEM64 family membrane prot...   332   1e-88
ref|NP_001239770.1| uncharacterized protein LOC100810779 [Glycin...   331   2e-88
ref|XP_002463296.1| hypothetical protein SORBIDRAFT_02g041420 [S...   330   4e-88
ref|XP_003546127.1| PREDICTED: TVP38/TMEM64 family membrane prot...   329   9e-88

>ref|XP_002517154.1| conserved hypothetical protein [Ricinus communis]
            gi|223543789|gb|EEF45317.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 302

 Score =  348 bits (893), Expect = 2e-93
 Identities = 187/300 (62%), Positives = 214/300 (71%), Gaps = 6/300 (2%)
 Frame = +3

Query: 231  LKPSIVEEE--EEACRPWRRRL---LMAVTWGAVARISXXXXXXXXXXXXXXXXPIEKIL 395
            LK SI E E  EE CRPWRR+L   + ++TWG+  RI+                P+EKIL
Sbjct: 3    LKQSISEYEDNEEECRPWRRKLSSTMASMTWGSALRITLLFLLIAAVVVACFTLPVEKIL 62

Query: 396  KHFLIWIDQNLGHWGPVVLAFAYIPLTVLAVPASVXXXXXXXXXXXXXXFVADSLGATIG 575
            K FL+W++Q+LG WGP+VLA AYIPLTVLAVPASV              FVADS+GAT+G
Sbjct: 63   KDFLLWVEQDLGPWGPLVLAVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADSIGATVG 122

Query: 576  ATAAFLLGRTIGRSYVISKLKDYPQFQAVAIAIQRSGFKIXXXXXXXXXXXFNMLNYLLS 755
            A AAFLLGRTIGRS+VISKLKDYPQF++VAIAIQRSGFKI           FNMLNYLLS
Sbjct: 123  AGAAFLLGRTIGRSFVISKLKDYPQFRSVAIAIQRSGFKIVLLLRLVPLLPFNMLNYLLS 182

Query: 756  VTPVGIGEYMLASWLGMMPITFALVYVGTTLKDLSDVTHGWGEISTTRWXXXXXXXXXXX 935
            VTPV +GEYMLASW+GMMPIT ALVYVGTTLKDLSDVTHGW + STTRW           
Sbjct: 183  VTPVPLGEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWSKFSTTRWVCIVLGFVVSV 242

Query: 936  XXMVCVTKVAKSSLDKALAENADMGG-LASQQLPITADPSSDLHQPLIIKIDSLGDDHEK 1112
              M CVT+VAKS+L KALAEN D+   L++ QLPI  DPS DL+QPLIIKID+  DDHEK
Sbjct: 243  VLMFCVTRVAKSALAKALAENEDIDTILSTPQLPIVGDPSVDLNQPLIIKIDAPEDDHEK 302


>ref|XP_003562547.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like
            [Brachypodium distachyon]
          Length = 271

 Score =  332 bits (852), Expect = 1e-88
 Identities = 172/273 (63%), Positives = 198/273 (72%)
 Frame = +3

Query: 294  MAVTWGAVARISXXXXXXXXXXXXXXXXPIEKILKHFLIWIDQNLGHWGPVVLAFAYIPL 473
            MA++W +  R++                P+EKILK FL+WI +NLG WGP+VLA AYIPL
Sbjct: 1    MALSWPSAIRLAVGAALLVAVAVALFTLPVEKILKDFLVWIKENLGAWGPLVLAIAYIPL 60

Query: 474  TVLAVPASVXXXXXXXXXXXXXXFVADSLGATIGATAAFLLGRTIGRSYVISKLKDYPQF 653
            TVLAVPAS+              FVADS+GATIGATAAFLLGRTIGR YV++K KDYP+F
Sbjct: 61   TVLAVPASILTLGGGYLFGLPVGFVADSIGATIGATAAFLLGRTIGRPYVLAKCKDYPKF 120

Query: 654  QAVAIAIQRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVGIGEYMLASWLGMMPITFALVY 833
            QAVAIAIQRSGFKI           FNMLNYLLSVTPVG+GEYMLASWLGMMPIT ALVY
Sbjct: 121  QAVAIAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVGLGEYMLASWLGMMPITLALVY 180

Query: 834  VGTTLKDLSDVTHGWGEISTTRWXXXXXXXXXXXXXMVCVTKVAKSSLDKALAENADMGG 1013
            VGTTLKDLSDVTHGW EISTTRW             ++CVT+VAKSSLDKALAEN ++  
Sbjct: 181  VGTTLKDLSDVTHGWSEISTTRWILIISGFILSVVLIICVTRVAKSSLDKALAENGEV-D 239

Query: 1014 LASQQLPITADPSSDLHQPLIIKIDSLGDDHEK 1112
            + + QLP+ A P SDLHQPL+IKID+  +DHEK
Sbjct: 240  IGTPQLPVVASP-SDLHQPLVIKIDTSNEDHEK 271


>ref|NP_001239770.1| uncharacterized protein LOC100810779 [Glycine max]
            gi|255646580|gb|ACU23764.1| unknown [Glycine max]
          Length = 274

 Score =  331 bits (849), Expect = 2e-88
 Identities = 171/274 (62%), Positives = 199/274 (72%), Gaps = 1/274 (0%)
 Frame = +3

Query: 294  MAVTWGAVARISXXXXXXXXXXXXXXXXPIEKILKHFLIWIDQNLGHWGPVVLAFAYIPL 473
            M+++W +  RI+                PIEK++K FL+W+D +LG WGP+VLA AYIPL
Sbjct: 1    MSLSWASALRITILLLLLAAVIVACFTLPIEKMMKDFLLWVDHDLGPWGPLVLAVAYIPL 60

Query: 474  TVLAVPASVXXXXXXXXXXXXXXFVADSLGATIGATAAFLLGRTIGRSYVISKLKDYPQF 653
            TVLAVPASV              FVADS+GAT+GA AAFLLGRTIGRS+V+S+LKDYPQF
Sbjct: 61   TVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVVSRLKDYPQF 120

Query: 654  QAVAIAIQRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVGIGEYMLASWLGMMPITFALVY 833
            ++VAIAI+RSGFKI           FNMLNYLLSVTPV IGEYMLASWLGMMPIT ALVY
Sbjct: 121  RSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSIGEYMLASWLGMMPITLALVY 180

Query: 834  VGTTLKDLSDVTHGWGEISTTRWXXXXXXXXXXXXXMVCVTKVAKSSLDKALAENADMGG 1013
            VGTTLKDLSDVTHGWGE S TRW             M+CVTKVAK++LDKALAEN D+ G
Sbjct: 181  VGTTLKDLSDVTHGWGEFSKTRWAFIILGLVISVVLMICVTKVAKAALDKALAENEDIDG 240

Query: 1014 L-ASQQLPITADPSSDLHQPLIIKIDSLGDDHEK 1112
            + +S  LPI A+PS+DL+QPLIIKIDS  D HEK
Sbjct: 241  ITSSPDLPIVAEPSADLNQPLIIKIDSSEDSHEK 274


>ref|XP_002463296.1| hypothetical protein SORBIDRAFT_02g041420 [Sorghum bicolor]
            gi|241926673|gb|EER99817.1| hypothetical protein
            SORBIDRAFT_02g041420 [Sorghum bicolor]
          Length = 271

 Score =  330 bits (847), Expect = 4e-88
 Identities = 170/273 (62%), Positives = 197/273 (72%)
 Frame = +3

Query: 294  MAVTWGAVARISXXXXXXXXXXXXXXXXPIEKILKHFLIWIDQNLGHWGPVVLAFAYIPL 473
            MA++W +  R++                P+EKILK FL+WI +NLG WGP+VLA AYIPL
Sbjct: 1    MALSWPSAVRLAVAAVLLVAVGVALFTLPVEKILKDFLVWIKENLGPWGPLVLALAYIPL 60

Query: 474  TVLAVPASVXXXXXXXXXXXXXXFVADSLGATIGATAAFLLGRTIGRSYVISKLKDYPQF 653
            TVLAVPAS+              FVADS+GATIGATAAFLLGRTIGR YV+SK KDYP+F
Sbjct: 61   TVLAVPASILTLGGGYLFGLPVGFVADSIGATIGATAAFLLGRTIGRPYVLSKCKDYPKF 120

Query: 654  QAVAIAIQRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVGIGEYMLASWLGMMPITFALVY 833
            QAVAIAIQRSGFKI           FNMLNYLLSVTPVG+GEYMLASWLGMMPIT ALVY
Sbjct: 121  QAVAIAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVGVGEYMLASWLGMMPITLALVY 180

Query: 834  VGTTLKDLSDVTHGWGEISTTRWXXXXXXXXXXXXXMVCVTKVAKSSLDKALAENADMGG 1013
            VGTTLKDLSDVTHGW EISTTRW             ++C+TK+AKSSL+KALAEN ++  
Sbjct: 181  VGTTLKDLSDVTHGWSEISTTRWILIISGFVLSVVLIICITKIAKSSLEKALAENGEL-D 239

Query: 1014 LASQQLPITADPSSDLHQPLIIKIDSLGDDHEK 1112
            + + QLP+ A P SDL QPL+IKID+  +DHEK
Sbjct: 240  VGTSQLPVVASP-SDLQQPLVIKIDTSNEDHEK 271


>ref|XP_003546127.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Glycine
            max]
          Length = 274

 Score =  329 bits (844), Expect = 9e-88
 Identities = 170/274 (62%), Positives = 198/274 (72%), Gaps = 1/274 (0%)
 Frame = +3

Query: 294  MAVTWGAVARISXXXXXXXXXXXXXXXXPIEKILKHFLIWIDQNLGHWGPVVLAFAYIPL 473
            M+ +W +  RI+                PIEK++K FL+W+D +LG WGP+VLA AYIPL
Sbjct: 1    MSFSWSSTLRITILLLLLAAVIVACFTLPIEKMMKDFLLWVDHDLGPWGPLVLAVAYIPL 60

Query: 474  TVLAVPASVXXXXXXXXXXXXXXFVADSLGATIGATAAFLLGRTIGRSYVISKLKDYPQF 653
            TVLAVPASV              FVADS+GAT+GA AAFLLGRTIGRS+V+S+LKDYPQF
Sbjct: 61   TVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVVSRLKDYPQF 120

Query: 654  QAVAIAIQRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVGIGEYMLASWLGMMPITFALVY 833
            ++VAIAI+RSGFKI           FNMLNYLLSVTPV IGEYMLASWLGMMPIT ALVY
Sbjct: 121  RSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSIGEYMLASWLGMMPITLALVY 180

Query: 834  VGTTLKDLSDVTHGWGEISTTRWXXXXXXXXXXXXXMVCVTKVAKSSLDKALAENADMGG 1013
            VGTTLKDLSDVTHGWGE S TRW             M+CVT+VAK++LDKALAEN D+ G
Sbjct: 181  VGTTLKDLSDVTHGWGEFSKTRWAFIILGLVISVVLMICVTRVAKAALDKALAENEDIDG 240

Query: 1014 L-ASQQLPITADPSSDLHQPLIIKIDSLGDDHEK 1112
            + +S  LPI A+PS+DL+QPLIIKIDS  D HEK
Sbjct: 241  ITSSPDLPIVAEPSADLNQPLIIKIDSSEDSHEK 274


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