BLASTX nr result

ID: Cimicifuga21_contig00006412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006412
         (1538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531372.1| dtdp-glucose 4-6-dehydratase, putative [Rici...   650   0.0  
ref|XP_002284153.1| PREDICTED: UDP-glucuronic acid decarboxylase...   650   0.0  
ref|XP_002283871.1| PREDICTED: UDP-glucuronic acid decarboxylase...   649   0.0  
gb|AAX37336.1| UDP-glucuronic acid decarboxylase 3 [Populus tome...   642   0.0  
ref|NP_180443.1| UDP-XYL synthase 6 [Arabidopsis thaliana] gi|42...   640   0.0  

>ref|XP_002531372.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis]
            gi|223529032|gb|EEF31020.1| dtdp-glucose 4-6-dehydratase,
            putative [Ricinus communis]
          Length = 346

 Score =  650 bits (1677), Expect = 0.0
 Identities = 315/342 (92%), Positives = 329/342 (96%)
 Frame = +1

Query: 247  ASNGNHQTGTKPPPSPSPLRNSKFFQSNMRILITGGAGFIGSHLVDKLMENEKNEVIVAD 426
            +SNG+HQT TKPPPSPSPLRNSKFFQSNMRIL+TGGAGFIGSHLVDKLMENEKNEVIVAD
Sbjct: 5    SSNGDHQTTTKPPPSPSPLRNSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVAD 64

Query: 427  NYFTGSKDNLKKWIGHPRFELIRHDVTESLLVEVDRIYHLACPASPIFYKYNAVKTIKTN 606
            NYFTGSKDNLKKWIGHPRFELIRHDVTE LL+EVD+IYHLACPASPIFYKYN VKTIKTN
Sbjct: 65   NYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 124

Query: 607  VIGTMNMLGLAKRVGARILLTSTSEVYGDPLVHPQTEEYWGNVNPIGVRSCYDEGKRVAE 786
            VIGT+NMLGLAKRVGARILLTSTSEVYGDPL+HPQ E YWGNVNPIGVRSCYDEGKRVAE
Sbjct: 125  VIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAE 184

Query: 787  TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQAPGTQTRSF 966
            TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQ PGTQTRSF
Sbjct: 185  TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSF 244

Query: 967  CFVSDMVDGLIRLMEGDNTGPINIGNPGEFTMMELADTVKELIDPEVKIELVENTPDDPR 1146
            C+VSDMV GLIRLMEG+NTGPINIGNPGEFTM+ELA+TVKELI+PEV+I +VENTPDDPR
Sbjct: 245  CYVSDMVYGLIRLMEGENTGPINIGNPGEFTMIELAETVKELINPEVEINMVENTPDDPR 304

Query: 1147 QRKPDITKAKELLGWEPKVSLREGLPLMEEDFRLRLGVAKKK 1272
            QRKPDITKAKELLGWEPKV LR GLPLMEEDFR RLGV K K
Sbjct: 305  QRKPDITKAKELLGWEPKVKLRNGLPLMEEDFRTRLGVPKTK 346


>ref|XP_002284153.1| PREDICTED: UDP-glucuronic acid decarboxylase 1 [Vitis vinifera]
            gi|147843232|emb|CAN80550.1| hypothetical protein
            VITISV_019391 [Vitis vinifera]
            gi|297746110|emb|CBI16166.3| unnamed protein product
            [Vitis vinifera]
          Length = 346

 Score =  650 bits (1676), Expect = 0.0
 Identities = 313/341 (91%), Positives = 330/341 (96%)
 Frame = +1

Query: 250  SNGNHQTGTKPPPSPSPLRNSKFFQSNMRILITGGAGFIGSHLVDKLMENEKNEVIVADN 429
            SNG HQ  TKPPP+PSPLRNSKFFQSNMRIL+TGGAGFIGSHLVDKLMENEKNEVIVADN
Sbjct: 6    SNGEHQITTKPPPTPSPLRNSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADN 65

Query: 430  YFTGSKDNLKKWIGHPRFELIRHDVTESLLVEVDRIYHLACPASPIFYKYNAVKTIKTNV 609
            YFTGSKDNLKKWIGHPRFELIRHDVTE LL+EVD+IYHLACPASPIFYK+N VKTIKTNV
Sbjct: 66   YFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDKIYHLACPASPIFYKHNPVKTIKTNV 125

Query: 610  IGTMNMLGLAKRVGARILLTSTSEVYGDPLVHPQTEEYWGNVNPIGVRSCYDEGKRVAET 789
            IGT+NMLGLAKRVGARILLTSTSEVYGDPL HPQTE YWGNVNPIGVRSCYDEGKRVAET
Sbjct: 126  IGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQTESYWGNVNPIGVRSCYDEGKRVAET 185

Query: 790  LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQAPGTQTRSFC 969
            LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGE LTVQAPGTQTRSFC
Sbjct: 186  LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQAPGTQTRSFC 245

Query: 970  FVSDMVDGLIRLMEGDNTGPINIGNPGEFTMMELADTVKELIDPEVKIELVENTPDDPRQ 1149
            +VSDMVDGLIRLMEG+NTGPINIGNPGEFTM+ELA+TVKELI+PEV I++V+NTPDDPRQ
Sbjct: 246  YVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAETVKELINPEVVIKMVDNTPDDPRQ 305

Query: 1150 RKPDITKAKELLGWEPKVSLREGLPLMEEDFRLRLGVAKKK 1272
            RKPDI+KAKELLGWEPK+ LR+GLPLMEEDFRLRLGV KKK
Sbjct: 306  RKPDISKAKELLGWEPKIKLRDGLPLMEEDFRLRLGVPKKK 346


>ref|XP_002283871.1| PREDICTED: UDP-glucuronic acid decarboxylase 1 [Vitis vinifera]
            gi|147766093|emb|CAN65700.1| hypothetical protein
            VITISV_010481 [Vitis vinifera]
            gi|296086255|emb|CBI31696.3| unnamed protein product
            [Vitis vinifera]
          Length = 345

 Score =  649 bits (1673), Expect = 0.0
 Identities = 311/339 (91%), Positives = 330/339 (97%)
 Frame = +1

Query: 250  SNGNHQTGTKPPPSPSPLRNSKFFQSNMRILITGGAGFIGSHLVDKLMENEKNEVIVADN 429
            SNG+H + TKPPP+PSPLRNSKFFQSNMRIL+TGGAGFIGSHLVDKLM+NEKNEVIVADN
Sbjct: 6    SNGDHNSVTKPPPTPSPLRNSKFFQSNMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADN 65

Query: 430  YFTGSKDNLKKWIGHPRFELIRHDVTESLLVEVDRIYHLACPASPIFYKYNAVKTIKTNV 609
            YFTGSKDNL+KWIGHPRFELIRHDVTE LL+EVD+IYHLACPASPIFYKYN VKTIKTNV
Sbjct: 66   YFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNV 125

Query: 610  IGTMNMLGLAKRVGARILLTSTSEVYGDPLVHPQTEEYWGNVNPIGVRSCYDEGKRVAET 789
            IGT+NMLGLAKRVGARILLTSTSEVYGDPLVHPQ E YWGNVNPIGVRSCYDEGKRVAET
Sbjct: 126  IGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQEESYWGNVNPIGVRSCYDEGKRVAET 185

Query: 790  LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQAPGTQTRSFC 969
            LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA+RGE+LTVQAPGTQTRSFC
Sbjct: 186  LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGESLTVQAPGTQTRSFC 245

Query: 970  FVSDMVDGLIRLMEGDNTGPINIGNPGEFTMMELADTVKELIDPEVKIELVENTPDDPRQ 1149
            +VSDMVDGL+RLMEGDNTGPINIGNPGEFTM+ELA+TVKELI+P+V+I +VENTPDDPRQ
Sbjct: 246  YVSDMVDGLVRLMEGDNTGPINIGNPGEFTMLELAETVKELINPKVEISMVENTPDDPRQ 305

Query: 1150 RKPDITKAKELLGWEPKVSLREGLPLMEEDFRLRLGVAK 1266
            RKPDITKAKELLGWEP V LREGLPLMEEDFRLRLGVAK
Sbjct: 306  RKPDITKAKELLGWEPNVKLREGLPLMEEDFRLRLGVAK 344


>gb|AAX37336.1| UDP-glucuronic acid decarboxylase 3 [Populus tomentosa]
          Length = 343

 Score =  642 bits (1656), Expect = 0.0
 Identities = 313/343 (91%), Positives = 325/343 (94%)
 Frame = +1

Query: 244  MASNGNHQTGTKPPPSPSPLRNSKFFQSNMRILITGGAGFIGSHLVDKLMENEKNEVIVA 423
            MASNG+HQT  KPPPSPSPLRNSKF QSNMRIL+TGGAGFIGSHLVDKLMENEKNEVIVA
Sbjct: 1    MASNGDHQTTVKPPPSPSPLRNSKFSQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVA 60

Query: 424  DNYFTGSKDNLKKWIGHPRFELIRHDVTESLLVEVDRIYHLACPASPIFYKYNAVKTIKT 603
            DNYFTGSKDNL+KWIG PRFELIRHDVTE LLVEVD+IYHLACPASPIFYKYN VKTIKT
Sbjct: 61   DNYFTGSKDNLRKWIGQPRFELIRHDVTEPLLVEVDQIYHLACPASPIFYKYNPVKTIKT 120

Query: 604  NVIGTMNMLGLAKRVGARILLTSTSEVYGDPLVHPQTEEYWGNVNPIGVRSCYDEGKRVA 783
            NVIGT+NMLGLAKRVGARILLTSTSEVYGDPLVHPQ E YWGNVNPIGVRSCYDEGKRVA
Sbjct: 121  NVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVA 180

Query: 784  ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQAPGTQTRS 963
            ETLMFDYHRQHGIE RIARIFNTYGPRMNIDDGRVVSNFIAQALRGE LTVQ PGTQTRS
Sbjct: 181  ETLMFDYHRQHGIEFRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRS 240

Query: 964  FCFVSDMVDGLIRLMEGDNTGPINIGNPGEFTMMELADTVKELIDPEVKIELVENTPDDP 1143
            FC+VSDMVDGLIRLMEG+NTGPINIGNPGEFTM ELA+TVKELI+P V+I +VENTPDDP
Sbjct: 241  FCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAETVKELINPGVEINMVENTPDDP 300

Query: 1144 RQRKPDITKAKELLGWEPKVSLREGLPLMEEDFRLRLGVAKKK 1272
            RQRKPDITKAK LLGWEPKV LR+GLPLMEED RLRLGV KKK
Sbjct: 301  RQRKPDITKAKALLGWEPKVKLRDGLPLMEEDLRLRLGVTKKK 343


>ref|NP_180443.1| UDP-XYL synthase 6 [Arabidopsis thaliana]
            gi|42570963|ref|NP_973555.1| UDP-XYL synthase 6
            [Arabidopsis thaliana] gi|145329973|ref|NP_001077972.1|
            UDP-XYL synthase 6 [Arabidopsis thaliana]
            gi|3927825|gb|AAC79582.1| putative nucleotide-sugar
            dehydratase [Arabidopsis thaliana]
            gi|20466474|gb|AAM20554.1| putative nucleotide-sugar
            dehydratase [Arabidopsis thaliana]
            gi|22136442|gb|AAM91299.1| putative nucleotide-sugar
            dehydratase [Arabidopsis thaliana]
            gi|330253073|gb|AEC08167.1| UDP-XYL synthase 6
            [Arabidopsis thaliana] gi|330253074|gb|AEC08168.1|
            UDP-XYL synthase 6 [Arabidopsis thaliana]
            gi|330253075|gb|AEC08169.1| UDP-XYL synthase 6
            [Arabidopsis thaliana]
          Length = 343

 Score =  640 bits (1652), Expect = 0.0
 Identities = 313/343 (91%), Positives = 328/343 (95%), Gaps = 1/343 (0%)
 Frame = +1

Query: 244  MASNG-NHQTGTKPPPSPSPLRNSKFFQSNMRILITGGAGFIGSHLVDKLMENEKNEVIV 420
            MASN  N  T TKPPP PSPLRNSKFFQSNMRIL+TGGAGFIGSHLVDKLM+NEKNEVIV
Sbjct: 1    MASNSSNGTTTTKPPPMPSPLRNSKFFQSNMRILVTGGAGFIGSHLVDKLMQNEKNEVIV 60

Query: 421  ADNYFTGSKDNLKKWIGHPRFELIRHDVTESLLVEVDRIYHLACPASPIFYKYNAVKTIK 600
            ADNYFTGSKDNLKKWIGHPRFELIRHDVTE L VEVD+IYHLACPASPIFYKYN VKTIK
Sbjct: 61   ADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLFVEVDQIYHLACPASPIFYKYNPVKTIK 120

Query: 601  TNVIGTMNMLGLAKRVGARILLTSTSEVYGDPLVHPQTEEYWGNVNPIGVRSCYDEGKRV 780
            TNVIGT+NMLGLAKRVGARILLTSTSEVYGDPLVHPQTE YWGNVNPIGVRSCYDEGKRV
Sbjct: 121  TNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRV 180

Query: 781  AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQAPGTQTR 960
            AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQ PGTQTR
Sbjct: 181  AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTR 240

Query: 961  SFCFVSDMVDGLIRLMEGDNTGPINIGNPGEFTMMELADTVKELIDPEVKIELVENTPDD 1140
            SFC+VSDMV+GL+RLMEGD TGPINIGNPGEFTM+ELA+TVKELI P+V+I++VENTPDD
Sbjct: 241  SFCYVSDMVEGLMRLMEGDQTGPINIGNPGEFTMVELAETVKELIKPDVEIKMVENTPDD 300

Query: 1141 PRQRKPDITKAKELLGWEPKVSLREGLPLMEEDFRLRLGVAKK 1269
            PRQRKPDI+KAKE+LGWEPKV LREGLPLMEEDFRLRLGV KK
Sbjct: 301  PRQRKPDISKAKEVLGWEPKVKLREGLPLMEEDFRLRLGVPKK 343


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