BLASTX nr result

ID: Cimicifuga21_contig00006405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006405
         (1277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138434.1| PREDICTED: pollen-specific protein SF3-like ...   359   1e-96
gb|ACX47456.1| LIM1 [Hevea brasiliensis]                              357   3e-96
gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tab...   356   8e-96
ref|XP_002279922.1| PREDICTED: pollen-specific protein SF3 isofo...   355   2e-95
ref|XP_002312139.1| predicted protein [Populus trichocarpa] gi|1...   354   3e-95

>ref|XP_004138434.1| PREDICTED: pollen-specific protein SF3-like [Cucumis sativus]
           gi|449516649|ref|XP_004165359.1| PREDICTED:
           pollen-specific protein SF3-like [Cucumis sativus]
          Length = 189

 Score =  359 bits (921), Expect = 1e-96
 Identities = 170/193 (88%), Positives = 185/193 (95%)
 Frame = -2

Query: 844 MSFIGTQEKCKACDKTVYVMDQLSADGVSYHKACFKCSHCKGTLKLSNYSSMEGVLYCKP 665
           MSFIGTQ+KCKAC+KTVY ++QLSADGVSYHK+CFKCSHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 664 HFEQLFKESGNFNKNFQSPVAKAAEKLERLTPELTRSPSKAAGMFSGTQEKCATCGKTAY 485
           HFEQLFKE+GNFNKNFQSP AK+AEKL   TPELTRSPSKAAGMFSGTQ+KCATCGKT Y
Sbjct: 61  HFEQLFKETGNFNKNFQSP-AKSAEKL---TPELTRSPSKAAGMFSGTQDKCATCGKTVY 116

Query: 484 PLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKC 305
           PLEKVTVE+Q+YHKSCFKCSHGGC+LSPSNYAAL+GILYCKHHFSQLFKEKGSYNHLIK 
Sbjct: 117 PLEKVTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKS 176

Query: 304 ATIKRSAATVPDA 266
           A++KRSAA VP+A
Sbjct: 177 ASMKRSAAPVPEA 189


>gb|ACX47456.1| LIM1 [Hevea brasiliensis]
          Length = 189

 Score =  357 bits (917), Expect = 3e-96
 Identities = 169/193 (87%), Positives = 183/193 (94%)
 Frame = -2

Query: 844 MSFIGTQEKCKACDKTVYVMDQLSADGVSYHKACFKCSHCKGTLKLSNYSSMEGVLYCKP 665
           MSF GTQ+KCKAC+KTVY M+ LSADGV YHK+CFKC HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYPMELLSADGVPYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKP 60

Query: 664 HFEQLFKESGNFNKNFQSPVAKAAEKLERLTPELTRSPSKAAGMFSGTQEKCATCGKTAY 485
           HFEQLFKE+GNFNKNFQSP AK+AEKL   TPELTRSPSKAA MFSGTQEKCATCGKTAY
Sbjct: 61  HFEQLFKETGNFNKNFQSP-AKSAEKL---TPELTRSPSKAASMFSGTQEKCATCGKTAY 116

Query: 484 PLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKC 305
           PLEKVTVE+QAYHKSCFKCSHGGCSLSPSNYAAL+G+LYCKHHFSQLFKEKGSYNHLIKC
Sbjct: 117 PLEKVTVESQAYHKSCFKCSHGGCSLSPSNYAALEGVLYCKHHFSQLFKEKGSYNHLIKC 176

Query: 304 ATIKRSAATVPDA 266
           A++KR+AA+VP+A
Sbjct: 177 ASMKRAAASVPEA 189



 Score = 97.4 bits (241), Expect = 7e-18
 Identities = 41/74 (55%), Positives = 55/74 (74%)
 Frame = -2

Query: 847 AMSFIGTQEKCKACDKTVYVMDQLSADGVSYHKACFKCSHCKGTLKLSNYSSMEGVLYCK 668
           A  F GTQEKC  C KT Y +++++ +  +YHK+CFKCSH   +L  SNY+++EGVLYCK
Sbjct: 98  ASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSLSPSNYAALEGVLYCK 157

Query: 667 PHFEQLFKESGNFN 626
            HF QLFKE G++N
Sbjct: 158 HHFSQLFKEKGSYN 171


>gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tabacum]
           gi|1841464|emb|CAA71891.1| LIM-domain SF3 protein
           [Nicotiana tabacum]
          Length = 189

 Score =  356 bits (913), Expect = 8e-96
 Identities = 170/193 (88%), Positives = 184/193 (95%)
 Frame = -2

Query: 844 MSFIGTQEKCKACDKTVYVMDQLSADGVSYHKACFKCSHCKGTLKLSNYSSMEGVLYCKP 665
           MSFIGTQ+KCKAC+KTVY ++ LSADGV+YHK+CFKCSHCKGTLKLSN+SSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVELLSADGVNYHKSCFKCSHCKGTLKLSNFSSMEGVLYCKP 60

Query: 664 HFEQLFKESGNFNKNFQSPVAKAAEKLERLTPELTRSPSKAAGMFSGTQEKCATCGKTAY 485
           HFEQLFKESGNFNKNFQSP AK+AEKL   TPELTRSPSKAAGMFSGTQEKCATCGKTAY
Sbjct: 61  HFEQLFKESGNFNKNFQSP-AKSAEKL---TPELTRSPSKAAGMFSGTQEKCATCGKTAY 116

Query: 484 PLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKC 305
           PLEKVTVENQ+YHK+CFKCSHGGCSLSPSNYAAL+GILYCK HFSQLFKEKGSYNHLIK 
Sbjct: 117 PLEKVTVENQSYHKTCFKCSHGGCSLSPSNYAALNGILYCKPHFSQLFKEKGSYNHLIKS 176

Query: 304 ATIKRSAATVPDA 266
           A++KR AATVPD+
Sbjct: 177 ASMKRPAATVPDS 189


>ref|XP_002279922.1| PREDICTED: pollen-specific protein SF3 isoform 1 [Vitis vinifera]
           gi|147859521|emb|CAN81425.1| hypothetical protein
           VITISV_014590 [Vitis vinifera]
           gi|296086105|emb|CBI31546.3| unnamed protein product
           [Vitis vinifera]
          Length = 189

 Score =  355 bits (910), Expect = 2e-95
 Identities = 170/193 (88%), Positives = 182/193 (94%)
 Frame = -2

Query: 844 MSFIGTQEKCKACDKTVYVMDQLSADGVSYHKACFKCSHCKGTLKLSNYSSMEGVLYCKP 665
           MSFIGTQ+KCKAC KTVY ++QLSADGV YHK+CFKCSHC GTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACLKTVYPVEQLSADGVVYHKSCFKCSHCNGTLKLSNYSSMEGVLYCKP 60

Query: 664 HFEQLFKESGNFNKNFQSPVAKAAEKLERLTPELTRSPSKAAGMFSGTQEKCATCGKTAY 485
           HFEQLFKESGNFNKNFQSP AK+AEKL   TPELTRSPSKAA MFSGTQEKCATCGKTAY
Sbjct: 61  HFEQLFKESGNFNKNFQSP-AKSAEKL---TPELTRSPSKAASMFSGTQEKCATCGKTAY 116

Query: 484 PLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKC 305
           PLEKVTVE+QAYHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIK 
Sbjct: 117 PLEKVTVESQAYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKS 176

Query: 304 ATIKRSAATVPDA 266
           A++KRSAA+VPDA
Sbjct: 177 ASMKRSAASVPDA 189



 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 41/83 (49%), Positives = 57/83 (68%)
 Frame = -2

Query: 847 AMSFIGTQEKCKACDKTVYVMDQLSADGVSYHKACFKCSHCKGTLKLSNYSSMEGVLYCK 668
           A  F GTQEKC  C KT Y +++++ +  +YHK+CFKCSH    +  SNY+++EG+LYCK
Sbjct: 98  ASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPISPSNYAALEGILYCK 157

Query: 667 PHFEQLFKESGNFNKNFQSPVAK 599
            HF QLFKE G++N   +S   K
Sbjct: 158 HHFAQLFKEKGSYNHLIKSASMK 180


>ref|XP_002312139.1| predicted protein [Populus trichocarpa] gi|118485190|gb|ABK94456.1|
           unknown [Populus trichocarpa]
           gi|222851959|gb|EEE89506.1| predicted protein [Populus
           trichocarpa]
          Length = 189

 Score =  354 bits (908), Expect = 3e-95
 Identities = 165/193 (85%), Positives = 183/193 (94%)
 Frame = -2

Query: 844 MSFIGTQEKCKACDKTVYVMDQLSADGVSYHKACFKCSHCKGTLKLSNYSSMEGVLYCKP 665
           MSF GTQ+KCKAC+KTVY M+ LS DGV+YHK+CFKC HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYPMELLSTDGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKP 60

Query: 664 HFEQLFKESGNFNKNFQSPVAKAAEKLERLTPELTRSPSKAAGMFSGTQEKCATCGKTAY 485
           HF+QLFKE+GNFNKNFQSP AK+AEKL   TPELTRSPSKAAGMFSGTQEKCATCGKTAY
Sbjct: 61  HFDQLFKETGNFNKNFQSP-AKSAEKL---TPELTRSPSKAAGMFSGTQEKCATCGKTAY 116

Query: 484 PLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKC 305
           PLEKVTVE+QAYHKSCFKCSHGGC+++PSNYAAL+G+LYCKHHFSQLFKEKGSYNHLIKC
Sbjct: 117 PLEKVTVESQAYHKSCFKCSHGGCAITPSNYAALEGVLYCKHHFSQLFKEKGSYNHLIKC 176

Query: 304 ATIKRSAATVPDA 266
           A++KR+AA VP+A
Sbjct: 177 ASMKRAAAPVPEA 189