BLASTX nr result
ID: Cimicifuga21_contig00006405
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00006405 (1277 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004138434.1| PREDICTED: pollen-specific protein SF3-like ... 359 1e-96 gb|ACX47456.1| LIM1 [Hevea brasiliensis] 357 3e-96 gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tab... 356 8e-96 ref|XP_002279922.1| PREDICTED: pollen-specific protein SF3 isofo... 355 2e-95 ref|XP_002312139.1| predicted protein [Populus trichocarpa] gi|1... 354 3e-95 >ref|XP_004138434.1| PREDICTED: pollen-specific protein SF3-like [Cucumis sativus] gi|449516649|ref|XP_004165359.1| PREDICTED: pollen-specific protein SF3-like [Cucumis sativus] Length = 189 Score = 359 bits (921), Expect = 1e-96 Identities = 170/193 (88%), Positives = 185/193 (95%) Frame = -2 Query: 844 MSFIGTQEKCKACDKTVYVMDQLSADGVSYHKACFKCSHCKGTLKLSNYSSMEGVLYCKP 665 MSFIGTQ+KCKAC+KTVY ++QLSADGVSYHK+CFKCSHCKGTLKLSNYSSMEGVLYCKP Sbjct: 1 MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60 Query: 664 HFEQLFKESGNFNKNFQSPVAKAAEKLERLTPELTRSPSKAAGMFSGTQEKCATCGKTAY 485 HFEQLFKE+GNFNKNFQSP AK+AEKL TPELTRSPSKAAGMFSGTQ+KCATCGKT Y Sbjct: 61 HFEQLFKETGNFNKNFQSP-AKSAEKL---TPELTRSPSKAAGMFSGTQDKCATCGKTVY 116 Query: 484 PLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKC 305 PLEKVTVE+Q+YHKSCFKCSHGGC+LSPSNYAAL+GILYCKHHFSQLFKEKGSYNHLIK Sbjct: 117 PLEKVTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKS 176 Query: 304 ATIKRSAATVPDA 266 A++KRSAA VP+A Sbjct: 177 ASMKRSAAPVPEA 189 >gb|ACX47456.1| LIM1 [Hevea brasiliensis] Length = 189 Score = 357 bits (917), Expect = 3e-96 Identities = 169/193 (87%), Positives = 183/193 (94%) Frame = -2 Query: 844 MSFIGTQEKCKACDKTVYVMDQLSADGVSYHKACFKCSHCKGTLKLSNYSSMEGVLYCKP 665 MSF GTQ+KCKAC+KTVY M+ LSADGV YHK+CFKC HCKGTLKLSNYSSMEGVLYCKP Sbjct: 1 MSFTGTQQKCKACEKTVYPMELLSADGVPYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKP 60 Query: 664 HFEQLFKESGNFNKNFQSPVAKAAEKLERLTPELTRSPSKAAGMFSGTQEKCATCGKTAY 485 HFEQLFKE+GNFNKNFQSP AK+AEKL TPELTRSPSKAA MFSGTQEKCATCGKTAY Sbjct: 61 HFEQLFKETGNFNKNFQSP-AKSAEKL---TPELTRSPSKAASMFSGTQEKCATCGKTAY 116 Query: 484 PLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKC 305 PLEKVTVE+QAYHKSCFKCSHGGCSLSPSNYAAL+G+LYCKHHFSQLFKEKGSYNHLIKC Sbjct: 117 PLEKVTVESQAYHKSCFKCSHGGCSLSPSNYAALEGVLYCKHHFSQLFKEKGSYNHLIKC 176 Query: 304 ATIKRSAATVPDA 266 A++KR+AA+VP+A Sbjct: 177 ASMKRAAASVPEA 189 Score = 97.4 bits (241), Expect = 7e-18 Identities = 41/74 (55%), Positives = 55/74 (74%) Frame = -2 Query: 847 AMSFIGTQEKCKACDKTVYVMDQLSADGVSYHKACFKCSHCKGTLKLSNYSSMEGVLYCK 668 A F GTQEKC C KT Y +++++ + +YHK+CFKCSH +L SNY+++EGVLYCK Sbjct: 98 ASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSLSPSNYAALEGVLYCK 157 Query: 667 PHFEQLFKESGNFN 626 HF QLFKE G++N Sbjct: 158 HHFSQLFKEKGSYN 171 >gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tabacum] gi|1841464|emb|CAA71891.1| LIM-domain SF3 protein [Nicotiana tabacum] Length = 189 Score = 356 bits (913), Expect = 8e-96 Identities = 170/193 (88%), Positives = 184/193 (95%) Frame = -2 Query: 844 MSFIGTQEKCKACDKTVYVMDQLSADGVSYHKACFKCSHCKGTLKLSNYSSMEGVLYCKP 665 MSFIGTQ+KCKAC+KTVY ++ LSADGV+YHK+CFKCSHCKGTLKLSN+SSMEGVLYCKP Sbjct: 1 MSFIGTQQKCKACEKTVYPVELLSADGVNYHKSCFKCSHCKGTLKLSNFSSMEGVLYCKP 60 Query: 664 HFEQLFKESGNFNKNFQSPVAKAAEKLERLTPELTRSPSKAAGMFSGTQEKCATCGKTAY 485 HFEQLFKESGNFNKNFQSP AK+AEKL TPELTRSPSKAAGMFSGTQEKCATCGKTAY Sbjct: 61 HFEQLFKESGNFNKNFQSP-AKSAEKL---TPELTRSPSKAAGMFSGTQEKCATCGKTAY 116 Query: 484 PLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKC 305 PLEKVTVENQ+YHK+CFKCSHGGCSLSPSNYAAL+GILYCK HFSQLFKEKGSYNHLIK Sbjct: 117 PLEKVTVENQSYHKTCFKCSHGGCSLSPSNYAALNGILYCKPHFSQLFKEKGSYNHLIKS 176 Query: 304 ATIKRSAATVPDA 266 A++KR AATVPD+ Sbjct: 177 ASMKRPAATVPDS 189 >ref|XP_002279922.1| PREDICTED: pollen-specific protein SF3 isoform 1 [Vitis vinifera] gi|147859521|emb|CAN81425.1| hypothetical protein VITISV_014590 [Vitis vinifera] gi|296086105|emb|CBI31546.3| unnamed protein product [Vitis vinifera] Length = 189 Score = 355 bits (910), Expect = 2e-95 Identities = 170/193 (88%), Positives = 182/193 (94%) Frame = -2 Query: 844 MSFIGTQEKCKACDKTVYVMDQLSADGVSYHKACFKCSHCKGTLKLSNYSSMEGVLYCKP 665 MSFIGTQ+KCKAC KTVY ++QLSADGV YHK+CFKCSHC GTLKLSNYSSMEGVLYCKP Sbjct: 1 MSFIGTQQKCKACLKTVYPVEQLSADGVVYHKSCFKCSHCNGTLKLSNYSSMEGVLYCKP 60 Query: 664 HFEQLFKESGNFNKNFQSPVAKAAEKLERLTPELTRSPSKAAGMFSGTQEKCATCGKTAY 485 HFEQLFKESGNFNKNFQSP AK+AEKL TPELTRSPSKAA MFSGTQEKCATCGKTAY Sbjct: 61 HFEQLFKESGNFNKNFQSP-AKSAEKL---TPELTRSPSKAASMFSGTQEKCATCGKTAY 116 Query: 484 PLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKC 305 PLEKVTVE+QAYHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIK Sbjct: 117 PLEKVTVESQAYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKS 176 Query: 304 ATIKRSAATVPDA 266 A++KRSAA+VPDA Sbjct: 177 ASMKRSAASVPDA 189 Score = 95.9 bits (237), Expect = 2e-17 Identities = 41/83 (49%), Positives = 57/83 (68%) Frame = -2 Query: 847 AMSFIGTQEKCKACDKTVYVMDQLSADGVSYHKACFKCSHCKGTLKLSNYSSMEGVLYCK 668 A F GTQEKC C KT Y +++++ + +YHK+CFKCSH + SNY+++EG+LYCK Sbjct: 98 ASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPISPSNYAALEGILYCK 157 Query: 667 PHFEQLFKESGNFNKNFQSPVAK 599 HF QLFKE G++N +S K Sbjct: 158 HHFAQLFKEKGSYNHLIKSASMK 180 >ref|XP_002312139.1| predicted protein [Populus trichocarpa] gi|118485190|gb|ABK94456.1| unknown [Populus trichocarpa] gi|222851959|gb|EEE89506.1| predicted protein [Populus trichocarpa] Length = 189 Score = 354 bits (908), Expect = 3e-95 Identities = 165/193 (85%), Positives = 183/193 (94%) Frame = -2 Query: 844 MSFIGTQEKCKACDKTVYVMDQLSADGVSYHKACFKCSHCKGTLKLSNYSSMEGVLYCKP 665 MSF GTQ+KCKAC+KTVY M+ LS DGV+YHK+CFKC HCKGTLKLSNYSSMEGVLYCKP Sbjct: 1 MSFTGTQQKCKACEKTVYPMELLSTDGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKP 60 Query: 664 HFEQLFKESGNFNKNFQSPVAKAAEKLERLTPELTRSPSKAAGMFSGTQEKCATCGKTAY 485 HF+QLFKE+GNFNKNFQSP AK+AEKL TPELTRSPSKAAGMFSGTQEKCATCGKTAY Sbjct: 61 HFDQLFKETGNFNKNFQSP-AKSAEKL---TPELTRSPSKAAGMFSGTQEKCATCGKTAY 116 Query: 484 PLEKVTVENQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKC 305 PLEKVTVE+QAYHKSCFKCSHGGC+++PSNYAAL+G+LYCKHHFSQLFKEKGSYNHLIKC Sbjct: 117 PLEKVTVESQAYHKSCFKCSHGGCAITPSNYAALEGVLYCKHHFSQLFKEKGSYNHLIKC 176 Query: 304 ATIKRSAATVPDA 266 A++KR+AA VP+A Sbjct: 177 ASMKRAAAPVPEA 189