BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006396
         (1487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545031.1| PREDICTED: small nuclear ribonucleoprotein-a...   162   2e-37
ref|XP_003519562.1| PREDICTED: small nuclear ribonucleoprotein-a...   162   2e-37
ref|XP_002529898.1| small nuclear ribonucleoprotein-associated p...   162   2e-37
ref|XP_002529896.1| small nuclear ribonucleoprotein-associated p...   162   2e-37
ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-a...   159   2e-36

>ref|XP_003545031.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like
            [Glycine max]
          Length = 281

 Score =  162 bits (410), Expect = 2e-37
 Identities = 93/170 (54%), Positives = 101/170 (59%), Gaps = 3/170 (1%)
 Frame = -1

Query: 1238 LQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPSXXXXXXXXXXXXXXX 1059
            LQYINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP+               
Sbjct: 10   LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA--------KGKKPAE 61

Query: 1058 XXXXXXXXXXXXXXXRGEEVVSMTVEGPPPPEESXXXXXXXXXXXXXXXXXXXXXGIPTA 879
                           RGEEV+SMTVEGPPPPEES                     GIP A
Sbjct: 62   GGDREDRRTLGLVLLRGEEVISMTVEGPPPPEESRSKAVGAAALAGPGIGRAAGRGIPPA 121

Query: 878  PLVQAQPGLAGPVRXXXXXXXXXXXXXISRPPQLSAPPLNWP---PPVAR 738
            P+VQAQPGLAGPVR             ISRPPQL+APP+++P   PPV R
Sbjct: 122  PVVQAQPGLAGPVRGMGGPAPGMMQPQISRPPQLNAPPVSYPGGGPPVMR 171


>ref|XP_003519562.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like
            [Glycine max]
          Length = 282

 Score =  162 bits (410), Expect = 2e-37
 Identities = 93/170 (54%), Positives = 101/170 (59%), Gaps = 3/170 (1%)
 Frame = -1

Query: 1238 LQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPSXXXXXXXXXXXXXXX 1059
            LQYINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP+               
Sbjct: 10   LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA--------KGKKPAE 61

Query: 1058 XXXXXXXXXXXXXXXRGEEVVSMTVEGPPPPEESXXXXXXXXXXXXXXXXXXXXXGIPTA 879
                           RGEEV+SMTVEGPPPPEES                     GIP A
Sbjct: 62   GADREDRRTLGLVLLRGEEVISMTVEGPPPPEESRSKAVGAAALAGPGIGRAAGRGIPPA 121

Query: 878  PLVQAQPGLAGPVRXXXXXXXXXXXXXISRPPQLSAPPLNWP---PPVAR 738
            P+VQAQPGLAGPVR             ISRPPQL+APP+++P   PPV R
Sbjct: 122  PVVQAQPGLAGPVRGVGGPAPGMMQPQISRPPQLNAPPVSYPGGGPPVMR 171


>ref|XP_002529898.1| small nuclear ribonucleoprotein-associated protein, putative [Ricinus
            communis] gi|223530625|gb|EEF32501.1| small nuclear
            ribonucleoprotein-associated protein, putative [Ricinus
            communis]
          Length = 275

 Score =  162 bits (410), Expect = 2e-37
 Identities = 93/169 (55%), Positives = 101/169 (59%), Gaps = 2/169 (1%)
 Frame = -1

Query: 1238 LQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPSXXXXXXXXXXXXXXX 1059
            LQ+INYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP+               
Sbjct: 10   LQHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA----------KGKKN 59

Query: 1058 XXXXXXXXXXXXXXXRGEEVVSMTVEGPPPPEESXXXXXXXXXXXXXXXXXXXXXGIPTA 879
                           RGEEV+SMTVEGPPP EES                     GIPTA
Sbjct: 60   NEEREDRRTLGLVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTA 119

Query: 878  PLVQAQPGLAGPVRXXXXXXXXXXXXXISRP--PQLSAPPLNWPPPVAR 738
            PL+QAQPGLAGPVR             ISRP  PQLSAPP+++PPPV R
Sbjct: 120  PLIQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMSYPPPVIR 168


>ref|XP_002529896.1| small nuclear ribonucleoprotein-associated protein, putative [Ricinus
            communis] gi|223530623|gb|EEF32499.1| small nuclear
            ribonucleoprotein-associated protein, putative [Ricinus
            communis]
          Length = 275

 Score =  162 bits (410), Expect = 2e-37
 Identities = 93/169 (55%), Positives = 101/169 (59%), Gaps = 2/169 (1%)
 Frame = -1

Query: 1238 LQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPSXXXXXXXXXXXXXXX 1059
            LQ+INYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP+               
Sbjct: 10   LQHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA----------KGKKN 59

Query: 1058 XXXXXXXXXXXXXXXRGEEVVSMTVEGPPPPEESXXXXXXXXXXXXXXXXXXXXXGIPTA 879
                           RGEEV+SMTVEGPPP EES                     GIPTA
Sbjct: 60   NEEREDRRTLGLVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTA 119

Query: 878  PLVQAQPGLAGPVRXXXXXXXXXXXXXISRP--PQLSAPPLNWPPPVAR 738
            PL+QAQPGLAGPVR             ISRP  PQLSAPP+++PPPV R
Sbjct: 120  PLIQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMSYPPPVIR 168


>ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'
            [Vitis vinifera] gi|147774905|emb|CAN61706.1|
            hypothetical protein VITISV_001610 [Vitis vinifera]
          Length = 276

 Score =  159 bits (402), Expect = 2e-36
 Identities = 94/170 (55%), Positives = 100/170 (58%), Gaps = 3/170 (1%)
 Frame = -1

Query: 1238 LQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPSXXXXXXXXXXXXXXX 1059
            LQYINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP+               
Sbjct: 10   LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPA-----------KGKK 58

Query: 1058 XXXXXXXXXXXXXXXRGEEVVSMTVEGPPPPEESXXXXXXXXXXXXXXXXXXXXXGIPTA 879
                           RGEEV+SMTVEGPPPPEES                     GIPTA
Sbjct: 59   NEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVGAAAMAGPGIGRAAGRGIPTA 118

Query: 878  PLVQAQPGLAGPVRXXXXXXXXXXXXXISRP--PQLSAPPLNWP-PPVAR 738
            PL+QAQPGLAGPVR             ISRP  PQLSAPP+ +P  PV R
Sbjct: 119  PLIQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIR 168