BLASTX nr result

ID: Cimicifuga21_contig00006393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006393
         (1243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145998.1| PREDICTED: choline-phosphate cytidylyltransf...   470   e-130
ref|XP_002307859.1| predicted protein [Populus trichocarpa] gi|2...   459   e-127
ref|XP_002323169.1| predicted protein [Populus trichocarpa] gi|2...   459   e-127
ref|XP_003631247.1| PREDICTED: choline-phosphate cytidylyltransf...   458   e-126
ref|XP_003545206.1| PREDICTED: choline-phosphate cytidylyltransf...   454   e-125

>ref|XP_004145998.1| PREDICTED: choline-phosphate cytidylyltransferase B-like [Cucumis
            sativus] gi|449519894|ref|XP_004166969.1| PREDICTED:
            choline-phosphate cytidylyltransferase B-like [Cucumis
            sativus]
          Length = 332

 Score =  470 bits (1209), Expect = e-130
 Identities = 221/264 (83%), Positives = 245/264 (92%)
 Frame = -1

Query: 1126 TNNKSVSDPPTDRPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCSDEITHKYK 947
            + N S SD PTDRPVRVYADGIYDLFHFGHARSLEQAKK FPNT+LLVGCC+DE THK+K
Sbjct: 30   SQNHSNSDHPTDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTFLLVGCCNDETTHKFK 89

Query: 946  GKTVMTEDERYESLRHCRWVDEVIPDAPWVLSQEFLDKHKIDYVAHDSLPYADASGAGKD 767
            GKTVM E ERYESLRHC+WVDEVIPDAPWV+SQEF+DKHKID+VAHDSLPYADASGAGKD
Sbjct: 90   GKTVMNEAERYESLRHCKWVDEVIPDAPWVISQEFIDKHKIDFVAHDSLPYADASGAGKD 149

Query: 766  VYEFVKSVGKFKETQRTDGISTSDIIMRMLKDYNQYVMRNLDRGYARKDLGISYVKEKRL 587
            VYEFVK +GKFKET+RT+GISTSDIIMR++KDYNQYV+RNLDRGY+RK+LG+S+VKEKRL
Sbjct: 150  VYEFVKKIGKFKETKRTEGISTSDIIMRIVKDYNQYVLRNLDRGYSRKELGVSFVKEKRL 209

Query: 586  RVNMGLQKLRDKAKEHQEKVGEKIQTVSKTAVMHRNEWVENADRWVTGFLGMFEEGCHKM 407
            RVNM L+KL++K KEHQEKVGEKIQTV+KTA MHRNEWVENADRWV GFL MFEEGCHKM
Sbjct: 210  RVNMRLKKLQEKVKEHQEKVGEKIQTVAKTAGMHRNEWVENADRWVAGFLEMFEEGCHKM 269

Query: 406  GTAIRDRIQERLKGQQAGRLLQNG 335
            GTAIRDRIQERLKG Q  + + NG
Sbjct: 270  GTAIRDRIQERLKGAQQLKYISNG 293


>ref|XP_002307859.1| predicted protein [Populus trichocarpa] gi|222853835|gb|EEE91382.1|
            predicted protein [Populus trichocarpa]
          Length = 320

 Score =  459 bits (1182), Expect = e-127
 Identities = 222/283 (78%), Positives = 247/283 (87%), Gaps = 6/283 (2%)
 Frame = -1

Query: 1165 EMGDEEKLCN------TITTNNKSVSDPPTDRPVRVYADGIYDLFHFGHARSLEQAKKLF 1004
            E   +EK+ N      +  +N    + PP+DRPVRVYADGIYDLFHFGHARSLEQAKK F
Sbjct: 3    ETQQKEKMVNGNSCEVSCHSNPDPSTPPPSDRPVRVYADGIYDLFHFGHARSLEQAKKAF 62

Query: 1003 PNTYLLVGCCSDEITHKYKGKTVMTEDERYESLRHCRWVDEVIPDAPWVLSQEFLDKHKI 824
            PNTYLLVGCC+DEITHKYKGKTVMTE+ERYESLRHC+WVDEVIP APWV+ QEFLDKH I
Sbjct: 63   PNTYLLVGCCNDEITHKYKGKTVMTEEERYESLRHCKWVDEVIPGAPWVIDQEFLDKHNI 122

Query: 823  DYVAHDSLPYADASGAGKDVYEFVKSVGKFKETQRTDGISTSDIIMRMLKDYNQYVMRNL 644
            DYVAHDSLPYADASGAGKDVYEFVK VG+FKET+RTDGISTSDIIMR++KDYNQYV+RNL
Sbjct: 123  DYVAHDSLPYADASGAGKDVYEFVKKVGRFKETRRTDGISTSDIIMRIVKDYNQYVLRNL 182

Query: 643  DRGYARKDLGISYVKEKRLRVNMGLQKLRDKAKEHQEKVGEKIQTVSKTAVMHRNEWVEN 464
            DRGY+RK+LG+SYVKEKRLRVNM L+KL++K KEHQEKVGEK Q V+    MHRNEWVEN
Sbjct: 183  DRGYSRKELGVSYVKEKRLRVNMRLKKLQEKVKEHQEKVGEKFQIVA----MHRNEWVEN 238

Query: 463  ADRWVTGFLGMFEEGCHKMGTAIRDRIQERLKGQQAGRLLQNG 335
            ADRWV GFL MFEEGCHKMGTAIRDRIQE L+GQ +  LL+NG
Sbjct: 239  ADRWVAGFLEMFEEGCHKMGTAIRDRIQEGLRGQLSNGLLENG 281


>ref|XP_002323169.1| predicted protein [Populus trichocarpa] gi|222867799|gb|EEF04930.1|
            predicted protein [Populus trichocarpa]
          Length = 316

 Score =  459 bits (1181), Expect = e-127
 Identities = 219/265 (82%), Positives = 242/265 (91%)
 Frame = -1

Query: 1129 TTNNKSVSDPPTDRPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCSDEITHKY 950
            + ++ S   P +DRPVRVYADGIYDLFHFGHARSLEQAKK FPNTYLLVGCC+D+ THKY
Sbjct: 13   SNSDPSTLPPSSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDDTTHKY 72

Query: 949  KGKTVMTEDERYESLRHCRWVDEVIPDAPWVLSQEFLDKHKIDYVAHDSLPYADASGAGK 770
            KGKTVMTEDERYESLRHC+WVDEVIPDAPWV+ QEFLDKH IDYVAHDSLPYADASGAGK
Sbjct: 73   KGKTVMTEDERYESLRHCKWVDEVIPDAPWVIDQEFLDKHNIDYVAHDSLPYADASGAGK 132

Query: 769  DVYEFVKSVGKFKETQRTDGISTSDIIMRMLKDYNQYVMRNLDRGYARKDLGISYVKEKR 590
            DVYEFVK VG+FKET+RTDGISTSDIIMR++KDYNQYV+RNLDRGY+RK+LG+SYVKEKR
Sbjct: 133  DVYEFVKKVGRFKETKRTDGISTSDIIMRIVKDYNQYVLRNLDRGYSRKELGVSYVKEKR 192

Query: 589  LRVNMGLQKLRDKAKEHQEKVGEKIQTVSKTAVMHRNEWVENADRWVTGFLGMFEEGCHK 410
            LRVNM L+KL++K KE QEKVGEKIQ V+    MHRNEWVENADR V GFL MFEEGCHK
Sbjct: 193  LRVNMRLKKLQEKVKEQQEKVGEKIQIVT----MHRNEWVENADRLVAGFLEMFEEGCHK 248

Query: 409  MGTAIRDRIQERLKGQQAGRLLQNG 335
            MGTAIRDRIQERL+GQQ+ RLL+NG
Sbjct: 249  MGTAIRDRIQERLRGQQSSRLLENG 273


>ref|XP_003631247.1| PREDICTED: choline-phosphate cytidylyltransferase B-like isoform 1
            [Vitis vinifera] gi|297738012|emb|CBI27213.3| unnamed
            protein product [Vitis vinifera]
          Length = 289

 Score =  458 bits (1179), Expect = e-126
 Identities = 218/249 (87%), Positives = 235/249 (94%)
 Frame = -1

Query: 1090 RPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCSDEITHKYKGKTVMTEDERYE 911
            +PVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCC+DE+THKYKGKTVMT  ERYE
Sbjct: 9    KPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEVTHKYKGKTVMTGSERYE 68

Query: 910  SLRHCRWVDEVIPDAPWVLSQEFLDKHKIDYVAHDSLPYADASGAGKDVYEFVKSVGKFK 731
            SLRHCRWVDEVIPDAPWVL+QEF+DKH+IDYVAHDSLPYADASGAGKDVYEFVKS+GKFK
Sbjct: 69   SLRHCRWVDEVIPDAPWVLTQEFIDKHEIDYVAHDSLPYADASGAGKDVYEFVKSIGKFK 128

Query: 730  ETQRTDGISTSDIIMRMLKDYNQYVMRNLDRGYARKDLGISYVKEKRLRVNMGLQKLRDK 551
            ET+RTDGISTSDIIMR++KDYNQYVMRNLDRGY RKDLG+SYVKEKRLRVNMGL+KL +K
Sbjct: 129  ETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRVNMGLKKLHEK 188

Query: 550  AKEHQEKVGEKIQTVSKTAVMHRNEWVENADRWVTGFLGMFEEGCHKMGTAIRDRIQERL 371
             K+HQEKVGEKIQ V+KTA MHRNEWVENADR+V GFL MFEE CHKMGTAIRDRIQE+L
Sbjct: 189  VKKHQEKVGEKIQIVAKTAGMHRNEWVENADRFVAGFLEMFEESCHKMGTAIRDRIQEQL 248

Query: 370  KGQQAGRLL 344
            K QQ   LL
Sbjct: 249  KRQQLRGLL 257


>ref|XP_003545206.1| PREDICTED: choline-phosphate cytidylyltransferase B-like [Glycine
            max]
          Length = 318

 Score =  454 bits (1169), Expect = e-125
 Identities = 220/267 (82%), Positives = 244/267 (91%), Gaps = 4/267 (1%)
 Frame = -1

Query: 1123 NNKSVSDPPT-DRPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCSDEITHKYK 947
            ++K+ S P   DRPVRVYADGIYDLFHFGHARSLEQAKK FPNTYLLVGCC+DE+THKYK
Sbjct: 7    HSKTASPPEDQDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEVTHKYK 66

Query: 946  GKTVMTEDERYESLRHCRWVDEVIPDAPWVLSQEFLDKHKIDYVAHDSLPYADASGAGKD 767
            GKTVMTE ERYESLRHC+WVDEVIPDAPWV++QEFLDKH IDYVAHDSLPYADASGA  D
Sbjct: 67   GKTVMTEAERYESLRHCKWVDEVIPDAPWVINQEFLDKHYIDYVAHDSLPYADASGAAND 126

Query: 766  VYEFVKSVGKFKETQRTDGISTSDIIMRMLKDYNQYVMRNLDRGYARKDLGISYVKEKRL 587
            VYEFVKSVG+FKET+RT+GISTSD+IMR++KDYNQYV+RNLDRGY+R +LG+SYVKEKRL
Sbjct: 127  VYEFVKSVGRFKETKRTEGISTSDVIMRIVKDYNQYVLRNLDRGYSRNELGVSYVKEKRL 186

Query: 586  RVNMGLQKLRDKAKEHQEKVGEKIQTVSKTAVMHRNEWVENADRWVTGFLGMFEEGCHKM 407
            RVN  L+ L++K KEHQEKVGEKIQ V+KTA MHRNEWVENADRWV GFL MFEEGCHKM
Sbjct: 187  RVNRRLKTLQEKVKEHQEKVGEKIQIVAKTAGMHRNEWVENADRWVAGFLEMFEEGCHKM 246

Query: 406  GTAIRDRIQERLKGQQA--GRL-LQNG 335
            GTAIRDRIQERL+GQQ+  G L LQNG
Sbjct: 247  GTAIRDRIQERLRGQQSRDGTLRLQNG 273


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