BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006372
         (1938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containin...   225   4e-56
ref|XP_004157135.1| PREDICTED: zinc finger CCCH domain-containin...   219   3e-54
ref|XP_002514479.1| nucleic acid binding protein, putative [Rici...   218   4e-54
emb|CBI38961.3| unnamed protein product [Vitis vinifera]              217   8e-54
ref|XP_004139162.1| PREDICTED: zinc finger CCCH domain-containin...   202   3e-49

>ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containing protein 16-like [Vitis
            vinifera]
          Length = 383

 Score =  225 bits (573), Expect = 4e-56
 Identities = 138/329 (41%), Positives = 164/329 (49%), Gaps = 2/329 (0%)
 Frame = +3

Query: 189  KKEPCRNFMRGSCRFGDHCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGAPSGF 368
            KKEPCRNF RGSC++G+ CK                                 +  P GF
Sbjct: 4    KKEPCRNFQRGSCQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQ-RSNPFGF 62

Query: 369  ASFPKQQNQF-KPFENKWTR-TPDTNNTPVSGKQSNDQSQAAADHVCNNPEVCKRQMVED 542
                 Q N   KPFENKWTR +P T  +  S  + +D     A+H C +PE CKRQ+VED
Sbjct: 63   GV---QSNSLPKPFENKWTRFSPLTTGSSSSSSRQSDNQVQPANHKCTDPESCKRQIVED 119

Query: 543  FQKERPLWRLTCYAHSKYLPCDIGGDISYEELRAAAYDDAKKGLSLSSVVERERNLLNSK 722
            F+ ERP+W+LTCY H K  PCDI GDISYEELR AAYDDA +GLSL S+VERER+LLNSK
Sbjct: 120  FEHERPIWKLTCYGHCKSAPCDIVGDISYEELRLAAYDDAGRGLSLQSIVERERSLLNSK 179

Query: 723  LIEFENLLRNPSVISPNTVTDKPSSFMGINTSASSATGQNKVPPPVSSFSQLGFSANQGX 902
            LIEF++LLR P    PN+     S     N  ASS T QN  PP  SSFSQL  S N G 
Sbjct: 180  LIEFDSLLRKPYAAPPNSTLAIQSP--APNPDASSLTAQNNTPPSASSFSQLSTSPNMG- 236

Query: 903  XXXXXXXXXXXFGQQSPLPVSSPFGAVASSNNXXXXXXXXXXXXXXXNLFGAVASSNSNF 1082
                       FG +   P ++ FG                                   
Sbjct: 237  -----------FGTRPSTPSNNAFGQ---------------------------------- 251

Query: 1083 GQQSFPISTQTPNSFGTSNLNFGTQGLFG 1169
               S   S+QT  +FGT+NL FG  G FG
Sbjct: 252  -SNSIQFSSQTSGAFGTNNLAFGNAGSFG 279


>ref|XP_004157135.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
           [Cucumis sativus]
          Length = 360

 Score =  219 bits (557), Expect = 3e-54
 Identities = 123/269 (45%), Positives = 149/269 (55%), Gaps = 6/269 (2%)
 Frame = +3

Query: 189 KKEPCRNFMRGSCRFGDHCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGAPSGF 368
           KK+PCR+F RG+C++G+ CK                                  G     
Sbjct: 4   KKQPCRDFQRGTCQYGERCKFLHATQQAQQQKPNPFGFGVPN-----------NGQSKAV 52

Query: 369 ASFPKQQNQFKPFENKWTRTPDTNNTPVSGKQSN--DQSQAAADHVCNNPEVCKRQMVED 542
           A F  +QNQ+KPFENKWTR     +TP    QS   D    +++H C + E CKRQ+ ED
Sbjct: 53  ADFGSKQNQYKPFENKWTRP----STPAGNAQSRKPDNHLPSSNHKCTDGESCKRQIAED 108

Query: 543 FQKERPLWRLTCYAHSKYLPCDIGGDISYEELRAAAYDDAKKGLSLSSVVERERNLLNSK 722
           FQ ERPLW+LTCY H+K  PCDI GD+SYEELR  AYD+AK+G+SL S+VERERNLLNSK
Sbjct: 109 FQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSK 168

Query: 723 LIEFENLLRNPSVISPNTVTDKPSSFMGINTSASSATGQNKVPPPVSSFSQLGFSANQGX 902
           L EFE LL  P V   N      SSF G N+ +   + QN   P +SSFSQLG S N G 
Sbjct: 169 LAEFEGLLLKPYVTPSNRAPGNQSSFSGTNSPSILPSAQNNT-PSLSSFSQLGASLNTGF 227

Query: 903 XXXXXXXXXXXFGQQ----SPLPVSSPFG 977
                      FGQQ    SP+  SS FG
Sbjct: 228 GARPSNPHNTVFGQQVQFSSPVQNSSGFG 256


>ref|XP_002514479.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223546378|gb|EEF47879.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 282

 Score =  218 bits (556), Expect = 4e-54
 Identities = 116/236 (49%), Positives = 141/236 (59%), Gaps = 1/236 (0%)
 Frame = +3

Query: 189 KKEPCRNFMRGSCRFGDHCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGAPSGF 368
           +KE CRNF RGSC++G+ CK                                   +P GF
Sbjct: 4   RKEVCRNFQRGSCQYGERCKFLHVNNQQQQSNNNSFGFGSQQKQQNQ------SSSPFGF 57

Query: 369 ASFPKQQNQFKPFENKWTR-TPDTNNTPVSGKQSNDQSQAAADHVCNNPEVCKRQMVEDF 545
            +  K     KPFENKWTR +P +N       +  D     A+H C +P+ CKRQ+ EDF
Sbjct: 58  GTQSKSST--KPFENKWTRFSPISNAAATPSSRQPDNQPQPANHKCTDPDSCKRQIAEDF 115

Query: 546 QKERPLWRLTCYAHSKYLPCDIGGDISYEELRAAAYDDAKKGLSLSSVVERERNLLNSKL 725
           Q E+PLW+LTCY HSK  PCDIGGD+SYEELRA AYD+AK GL+L S+VERERNLL+SKL
Sbjct: 116 QNEKPLWKLTCYGHSKNGPCDIGGDVSYEELRALAYDEAKHGLTLQSIVERERNLLSSKL 175

Query: 726 IEFENLLRNPSVISPNTVTDKPSSFMGINTSASSATGQNKVPPPVSSFSQLGFSAN 893
           IEFENLLRNP    P +   + S F G+  +A   +GQN  PP VSSFSQLG S N
Sbjct: 176 IEFENLLRNPYAAPPKSAFSQ-SPFPGVTPNAILPSGQNNPPPSVSSFSQLGASLN 230


>emb|CBI38961.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  217 bits (553), Expect = 8e-54
 Identities = 124/272 (45%), Positives = 148/272 (54%), Gaps = 1/272 (0%)
 Frame = +3

Query: 357  PSGFASFPKQQNQFKPFENKWTR-TPDTNNTPVSGKQSNDQSQAAADHVCNNPEVCKRQM 533
            P G + F  +QN FKPFENKWTR +P T  +  S  + +D     A+H C +PE CKRQ+
Sbjct: 68   PKGTSDFGSKQNHFKPFENKWTRFSPLTTGSSSSSSRQSDNQVQPANHKCTDPESCKRQI 127

Query: 534  VEDFQKERPLWRLTCYAHSKYLPCDIGGDISYEELRAAAYDDAKKGLSLSSVVERERNLL 713
            VEDF+ ERP+W+LTCY H K  PCDI GDISYEELR AAYDDA +GLSL S+VERER+LL
Sbjct: 128  VEDFEHERPIWKLTCYGHCKSAPCDIVGDISYEELRLAAYDDAGRGLSLQSIVERERSLL 187

Query: 714  NSKLIEFENLLRNPSVISPNTVTDKPSSFMGINTSASSATGQNKVPPPVSSFSQLGFSAN 893
            NSKLIEF++LLR P    PN+     S     N  ASS T QN  PP  SSFSQL  S N
Sbjct: 188  NSKLIEFDSLLRKPYAAPPNSTLAIQSP--APNPDASSLTAQNNTPPSASSFSQLSTSPN 245

Query: 894  QGXXXXXXXXXXXXFGQQSPLPVSSPFGAVASSNNXXXXXXXXXXXXXXXNLFGAVASSN 1073
             G            FG +   P ++ FG                                
Sbjct: 246  MG------------FGTRPSTPSNNAFGQ------------------------------- 262

Query: 1074 SNFGQQSFPISTQTPNSFGTSNLNFGTQGLFG 1169
                  S   S+QT  +FGT+NL FG  G FG
Sbjct: 263  ----SNSIQFSSQTSGAFGTNNLAFGNAGSFG 290


>ref|XP_004139162.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
           [Cucumis sativus]
          Length = 377

 Score =  202 bits (514), Expect = 3e-49
 Identities = 111/215 (51%), Positives = 131/215 (60%), Gaps = 6/215 (2%)
 Frame = +3

Query: 351 GAPSGFASFPKQQNQFKPFENKWTRTPDTNNTPVSGKQSN--DQSQAAADHVCNNPEVCK 524
           G     A F  +QNQ+KPFENKWTR     +TP    QS   D    +++H C + E CK
Sbjct: 64  GQSKAVADFGSKQNQYKPFENKWTRP----STPTGNAQSRKPDNHLPSSNHKCTDGESCK 119

Query: 525 RQMVEDFQKERPLWRLTCYAHSKYLPCDIGGDISYEELRAAAYDDAKKGLSLSSVVERER 704
           RQ+ EDFQ ERPLW+LTCY H+K  PCDI GD+SYEELR  AYD+AK+G+SL S+VERER
Sbjct: 120 RQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERER 179

Query: 705 NLLNSKLIEFENLLRNPSVISPNTVTDKPSSFMGINTSASSATGQNKVPPPVSSFSQLGF 884
           NLLNSKL EFE LL  P V   N      SSF G N+ +   + QN   P +SSFSQLG 
Sbjct: 180 NLLNSKLAEFEGLLLKPYVTPSNRAPGNQSSFSGTNSPSILPSAQNNT-PSLSSFSQLGA 238

Query: 885 SANQGXXXXXXXXXXXXFGQQ----SPLPVSSPFG 977
           S N G            FGQQ    SP+  SS FG
Sbjct: 239 SLNTGFGARPSNPHNTVFGQQVQFSSPVQNSSGFG 273