BLASTX nr result

ID: Cimicifuga21_contig00006369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006369
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330633.1| predicted protein [Populus trichocarpa] gi|2...   147   3e-33
sp|Q75VR0.1|TPC1B_TOBAC RecName: Full=Two pore calcium channel p...   137   2e-30
sp|Q75VR1.1|TCP1A_TOBAC RecName: Full=Two pore calcium channel p...   137   3e-30
ref|NP_567258.1| two pore calcium channel protein 1 [Arabidopsis...   136   5e-30
gb|AAD11598.1| putative calcium channel [Arabidopsis thaliana] g...   136   5e-30

>ref|XP_002330633.1| predicted protein [Populus trichocarpa] gi|222872237|gb|EEF09368.1|
            predicted protein [Populus trichocarpa]
          Length = 726

 Score =  147 bits (370), Expect = 3e-33
 Identities = 75/147 (51%), Positives = 93/147 (63%), Gaps = 2/147 (1%)
 Frame = -3

Query: 695  FXXXXXSGNPKLEESTLSDNDYLLFNFNDYPNGMVTLFNLLVMGNWHLWMEGYVELTGTS 516
            F     +GN  LE + L+++DYLLFNFNDYPNGMVTLFNLLVMGNWH WM+ Y +LTGT 
Sbjct: 580  FGGLVNAGNLDLEGTGLAEDDYLLFNFNDYPNGMVTLFNLLVMGNWHEWMQSYKDLTGTY 639

Query: 515  WTLAYFVSFYXXXXXXXXXXXXXXXXXXXXXXXXXXASDDPEGESKETQGGKGQTRTV-- 342
            W+LAYF+SFY                           ++  E E KE    K + R+V  
Sbjct: 640  WSLAYFISFYLVTVLLLLNLVMAFVLEGFFAEMELETAEKCEAEDKEGSNSKSRRRSVGT 699

Query: 341  RSKSQRVDALLHHMLSAELKETECSNA 261
            +++SQRVD LLHHMLSAEL++ ECSNA
Sbjct: 700  KTRSQRVDNLLHHMLSAELEKPECSNA 726


>sp|Q75VR0.1|TPC1B_TOBAC RecName: Full=Two pore calcium channel protein 1B; AltName:
            Full=Voltage-dependent calcium channel protein TPC1B;
            Short=NtTPC1B gi|46275794|dbj|BAD15100.1| two-pore
            calcium channel [Nicotiana tabacum]
          Length = 735

 Score =  137 bits (345), Expect = 2e-30
 Identities = 74/148 (50%), Positives = 90/148 (60%), Gaps = 1/148 (0%)
 Frame = -3

Query: 704  LLCFXXXXXSGNPKLEESTLSDNDYLLFNFNDYPNGMVTLFNLLVMGNWHLWMEGYVELT 525
            L  F     +GNP L ++ L+ NDYLLFNFNDYPNGMVTLFN+LVMGNW +WM+ Y ELT
Sbjct: 587  LQIFGGIVNTGNPNLAQTDLAGNDYLLFNFNDYPNGMVTLFNILVMGNWQVWMQSYKELT 646

Query: 524  GTSWTLAYFVSFYXXXXXXXXXXXXXXXXXXXXXXXXXXASDD-PEGESKETQGGKGQTR 348
            GTSWT AYFVSFY                          AS    +G+ KE +  + +  
Sbjct: 647  GTSWTYAYFVSFYLISVLWLLNLIVAFVLEAFQAEMDLEASARCVDGDDKEAKRERRRNV 706

Query: 347  TVRSKSQRVDALLHHMLSAELKETECSN 264
              +++SQRVD LLHHML +EL  TECSN
Sbjct: 707  GTKTRSQRVDFLLHHMLRSEL--TECSN 732


>sp|Q75VR1.1|TCP1A_TOBAC RecName: Full=Two pore calcium channel protein 1A; AltName:
            Full=Voltage-dependent calcium channel protein TPC1A;
            Short=NtTPC1A gi|46275792|dbj|BAD15099.1| two-pore
            calcium channel [Nicotiana tabacum]
          Length = 735

 Score =  137 bits (344), Expect = 3e-30
 Identities = 73/148 (49%), Positives = 90/148 (60%), Gaps = 1/148 (0%)
 Frame = -3

Query: 704  LLCFXXXXXSGNPKLEESTLSDNDYLLFNFNDYPNGMVTLFNLLVMGNWHLWMEGYVELT 525
            L  F     +GNP L ++ L+ NDYLLFNFNDYPNGMVTLFN+LVMGNW +WM+ Y ELT
Sbjct: 587  LQIFGGIVNTGNPNLAQTDLAGNDYLLFNFNDYPNGMVTLFNILVMGNWQVWMQSYKELT 646

Query: 524  GTSWTLAYFVSFYXXXXXXXXXXXXXXXXXXXXXXXXXXASDD-PEGESKETQGGKGQTR 348
            GT+WT AYFVSFY                          AS    +G+ KE +  + +  
Sbjct: 647  GTAWTYAYFVSFYLISVLWLLNLIVAFVLEAFQAEVDLEASARCVDGDDKEAKSERRRNV 706

Query: 347  TVRSKSQRVDALLHHMLSAELKETECSN 264
              +++SQRVD LLHHML +EL  TECSN
Sbjct: 707  GTKTRSQRVDFLLHHMLRSEL--TECSN 732


>ref|NP_567258.1| two pore calcium channel protein 1 [Arabidopsis thaliana]
            gi|75166464|sp|Q94KI8.1|TPC1_ARATH RecName: Full=Two pore
            calcium channel protein 1; AltName: Full=Calcium channel
            protein 1; Short=AtCCH1; AltName: Full=Fatty acid
            oxygenation up-regulated protein 2; AltName:
            Full=Voltage-dependent calcium channel protein TPC1;
            Short=AtTPC1 gi|13786069|gb|AAK39554.1|AF360372_1
            putative calcium channel [Arabidopsis thaliana]
            gi|222422931|dbj|BAH19452.1| AT4G03560 [Arabidopsis
            thaliana] gi|332656937|gb|AEE82337.1| two pore calcium
            channel protein 1 [Arabidopsis thaliana]
          Length = 733

 Score =  136 bits (342), Expect = 5e-30
 Identities = 66/145 (45%), Positives = 87/145 (60%)
 Frame = -3

Query: 695  FXXXXXSGNPKLEESTLSDNDYLLFNFNDYPNGMVTLFNLLVMGNWHLWMEGYVELTGTS 516
            F     +GN KL E+ L+++DYLLFNFNDYPNGMVTLFNLLVMGNW +WME Y +LTGT 
Sbjct: 587  FGGLVNAGNKKLFETELAEDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMESYKDLTGTW 646

Query: 515  WTLAYFVSFYXXXXXXXXXXXXXXXXXXXXXXXXXXASDDPEGESKETQGGKGQTRTVRS 336
            W++ YFVSFY                            +  +G+  + +  + ++   +S
Sbjct: 647  WSITYFVSFYVITILLLLNLVVAFVLEAFFTELDLEEEEKCQGQDSQEKRNRRRSAGSKS 706

Query: 335  KSQRVDALLHHMLSAELKETECSNA 261
            +SQRVD LLHHML  EL + ECS +
Sbjct: 707  RSQRVDTLLHHMLGDELSKPECSTS 731


>gb|AAD11598.1| putative calcium channel [Arabidopsis thaliana]
            gi|4263043|gb|AAD15312.1| putative calcium channel
            [Arabidopsis thaliana] gi|7270679|emb|CAB77841.1|
            putative calcium channel [Arabidopsis thaliana]
          Length = 724

 Score =  136 bits (342), Expect = 5e-30
 Identities = 66/145 (45%), Positives = 87/145 (60%)
 Frame = -3

Query: 695  FXXXXXSGNPKLEESTLSDNDYLLFNFNDYPNGMVTLFNLLVMGNWHLWMEGYVELTGTS 516
            F     +GN KL E+ L+++DYLLFNFNDYPNGMVTLFNLLVMGNW +WME Y +LTGT 
Sbjct: 578  FGGLVNAGNKKLFETELAEDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMESYKDLTGTW 637

Query: 515  WTLAYFVSFYXXXXXXXXXXXXXXXXXXXXXXXXXXASDDPEGESKETQGGKGQTRTVRS 336
            W++ YFVSFY                            +  +G+  + +  + ++   +S
Sbjct: 638  WSITYFVSFYVITILLLLNLVVAFVLEAFFTELDLEEEEKCQGQDSQEKRNRRRSAGSKS 697

Query: 335  KSQRVDALLHHMLSAELKETECSNA 261
            +SQRVD LLHHML  EL + ECS +
Sbjct: 698  RSQRVDTLLHHMLGDELSKPECSTS 722


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