BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006363
         (1278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB29959.1| ubiquitin fusion-degradation protein-like [Solanu...   465   e-129
ref|XP_002513003.1| ubiquitin fusion degradaton protein, putativ...   465   e-129
ref|XP_003630940.1| Ubiquitin fusion degradation protein [Medica...   464   e-128
ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|2...   462   e-127
gb|ABK95938.1| unknown [Populus trichocarpa]                          460   e-127

>gb|ABB29959.1| ubiquitin fusion-degradation protein-like [Solanum tuberosum]
          Length = 315

 Score =  465 bits (1197), Expect = e-129
 Identities = 235/321 (73%), Positives = 250/321 (77%)
 Frame = +3

Query: 102  MFFEGYRYHGASFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHVDYPMLFELR 281
            MFF+GY YHG SFEQTYRCYPASFIDKPQLE+GDKIIMPPSALDRLASLH+DYPMLFELR
Sbjct: 1    MFFDGYGYHGRSFEQTYRCYPASFIDKPQLENGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 282  NADTERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGGIVRVKNATLPKGKYVKLQPHTM 461
            N  TERVSHCGVLEFIAEEGMIYMPYWMMEN+ LQEG  V VKN TLPKGKYVKLQPHT 
Sbjct: 61   NTSTERVSHCGVLEFIAEEGMIYMPYWMMENLFLQEGDTVTVKNVTLPKGKYVKLQPHTK 120

Query: 462  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPANAISIIETDCEVD 641
            DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKP+NAISIIETDCEVD
Sbjct: 121  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVD 180

Query: 642  FAPPLDYKEPERAVPAVPSSKAPTQVQEAPVEEEPKFNPFTGAGRRLDGKPLNYQPSPIS 821
            FAPPLDYKEPER  P+ P SKAP +V+EA  E EPKFNPFTG  RRLDGKPL  +P P S
Sbjct: 181  FAPPLDYKEPERVAPSRP-SKAPAEVEEAAAEVEPKFNPFTGGARRLDGKPLKQEPPPSS 239

Query: 822  SEPKDKRPEASNGGGXXXXXXXXXXXXXXXXXGKLVFGSSANRAXXXXXXXXXXXXXXXX 1001
            S   DK+ + +NGG                  GKLVFGS+ANRA                
Sbjct: 240  SGSXDKQVDVTNGGKKFADAASSSQNSSRQSQGKLVFGSNANRA-----PEKQKEPVKEE 294

Query: 1002 XXXXXXXXFQAFTGKKYSLKG 1064
                    FQAF+GKKYSL+G
Sbjct: 295  PPKKEEPKFQAFSGKKYSLRG 315


>ref|XP_002513003.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
            gi|223548014|gb|EEF49506.1| ubiquitin fusion degradaton
            protein, putative [Ricinus communis]
          Length = 356

 Score =  465 bits (1197), Expect = e-129
 Identities = 236/338 (69%), Positives = 256/338 (75%), Gaps = 1/338 (0%)
 Frame = +3

Query: 54   LFQG*LIRSSDLDIVTMFFEGYRYHGASFEQTYRCYPASFIDKPQLESGDKIIMPPSALD 233
            LF+G L+ +       MFF+GY YHG SFEQTYRCYPASFI+KPQ+ESGDKIIMPPSALD
Sbjct: 24   LFRGVLLEAK----FKMFFDGYGYHGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALD 79

Query: 234  RLASLHVDYPMLFELRNADTERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGGIVRVKN 413
            RLASLH+DYPMLFELRN   ER+SHCGVLEFIAEEGMIYMPYWMMEN+LLQEG IVRVKN
Sbjct: 80   RLASLHIDYPMLFELRNDAAERISHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKN 139

Query: 414  ATLPKGKYVKLQPHTMDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVET 593
             TLPKG YVKLQPHT DFLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYYIDIVET
Sbjct: 140  VTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIVET 199

Query: 594  KPANAISIIETDCEVDFAPPLDYKEPERAVPAVPSSKAPTQVQEAPVEEEPKFNPFTGAG 773
            KP+NAISIIETDCEVDFAPPLDYKEPER  P++P  KA  QV+E P E EPKFNPFTG  
Sbjct: 200  KPSNAISIIETDCEVDFAPPLDYKEPERTTPSIPQKKATAQVEEVPEETEPKFNPFTGVA 259

Query: 774  RRLDGKPLNYQPSPISSE-PKDKRPEASNGGGXXXXXXXXXXXXXXXXXGKLVFGSSANR 950
            RRLDGKPL  QP P+SS+  KDK+    +G G                 GKLVFGS+ NR
Sbjct: 260  RRLDGKPLKQQPFPVSSQGSKDKQAAVPSGRG-QPSLESSSQNSARQSQGKLVFGSNVNR 318

Query: 951  AXXXXXXXXXXXXXXXXXXXXXXXXFQAFTGKKYSLKG 1064
            A                        FQ FTG+KYSLKG
Sbjct: 319  APKETQKEVAKETKPEQSQKNEEPKFQPFTGRKYSLKG 356


>ref|XP_003630940.1| Ubiquitin fusion degradation protein [Medicago truncatula]
            gi|355524962|gb|AET05416.1| Ubiquitin fusion degradation
            protein [Medicago truncatula]
          Length = 320

 Score =  464 bits (1194), Expect = e-128
 Identities = 238/322 (73%), Positives = 249/322 (77%), Gaps = 1/322 (0%)
 Frame = +3

Query: 102  MFFEGYRYHGASFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHVDYPMLFELR 281
            MFF+GY YHG SFEQTYRCYPASFI+KPQLESGDKIIMPPSALDRLASLH+DYPMLFELR
Sbjct: 1    MFFDGYGYHGTSFEQTYRCYPASFIEKPQLESGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 282  NADTERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGGIVRVKNATLPKGKYVKLQPHTM 461
            NA  ERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEG +VRVKN TLPKG YVKLQPHT 
Sbjct: 61   NAAAERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120

Query: 462  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPANAISIIETDCEVD 641
            DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVE+KPANAISIIETDCEVD
Sbjct: 121  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVESKPANAISIIETDCEVD 180

Query: 642  FAPPLDYKEPERAVPAVPSSKAPTQVQEAPVEEEPKFNPFTGAGRRLDGKPLNYQPSPIS 821
            FAPPLDYKEPER V    + KAP   +EAP E EPKFNPFTG+GRRLDGKPLNYQP P+S
Sbjct: 181  FAPPLDYKEPERPVAPRSAGKAPEADKEAPAETEPKFNPFTGSGRRLDGKPLNYQPPPVS 240

Query: 822  SE-PKDKRPEASNGGGXXXXXXXXXXXXXXXXXGKLVFGSSANRAXXXXXXXXXXXXXXX 998
            S   KDK P A N                    GKLVFGS+ NR                
Sbjct: 241  SSGSKDKNPAAQNVNS-QPSTASSSQSNAPQTQGKLVFGSNPNRG-KETGKATEAKAKQE 298

Query: 999  XXXXXXXXXFQAFTGKKYSLKG 1064
                     FQ FTGKKYSL+G
Sbjct: 299  PPKEKEEDKFQPFTGKKYSLRG 320


>ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|222849415|gb|EEE86962.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  462 bits (1188), Expect = e-127
 Identities = 234/324 (72%), Positives = 252/324 (77%), Gaps = 3/324 (0%)
 Frame = +3

Query: 102  MFFEGYRYHGASFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHVDYPMLFELR 281
            MFF+GY YHG SFEQTYRCYPASFI+KPQ+ESGDKIIMPPSALDRLASLH+DYPMLFEL+
Sbjct: 1    MFFDGYGYHGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQ 60

Query: 282  NADTERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGGIVRVKNATLPKGKYVKLQPHTM 461
            N   ERVSHCGVLEFIAEEGMIYMPYWMMEN+LLQEG  VRVKN TLPKGKYVKLQPHT 
Sbjct: 61   NDAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDTVRVKNVTLPKGKYVKLQPHTK 120

Query: 462  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPANAISIIETDCEVD 641
            DFLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYYIDI+ETKP+NAISIIETDCEVD
Sbjct: 121  DFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180

Query: 642  FAPPLDYKEPERAVPAVPSSKAPTQVQEAPVEEEPKFNPFTGAGRRLDGKPLNYQPSPI- 818
            FAPPLDYKEPE+ V +VP SKA +Q +E P E EPKFNPFTGAGRRLDGKPL+YQP P  
Sbjct: 181  FAPPLDYKEPEKPVASVPPSKATSQAEEVPAETEPKFNPFTGAGRRLDGKPLSYQPPPAL 240

Query: 819  -SSEPKDKRPEASNGGGXXXXXXXXXXXXXXXXXGKLVFGSSANRA-XXXXXXXXXXXXX 992
             SS  KDK+P  ++ G                  GKLVFGS+  R               
Sbjct: 241  SSSVSKDKQPAVAD-GSRQPSLGSSSQNTARKSQGKLVFGSNTGRTPKETQREESGKETK 299

Query: 993  XXXXXXXXXXXFQAFTGKKYSLKG 1064
                       FQAFTGKKYSLKG
Sbjct: 300  QEQPEKKEEPKFQAFTGKKYSLKG 323


>gb|ABK95938.1| unknown [Populus trichocarpa]
          Length = 324

 Score =  460 bits (1183), Expect = e-127
 Identities = 233/323 (72%), Positives = 251/323 (77%), Gaps = 3/323 (0%)
 Frame = +3

Query: 105  FFEGYRYHGASFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHVDYPMLFELRN 284
            FF+GY YHG SFEQTYRCYPASFI+KPQ+ESGDKIIMPPSALDRLASLH+DYPMLFEL+N
Sbjct: 3    FFDGYGYHGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQN 62

Query: 285  ADTERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGGIVRVKNATLPKGKYVKLQPHTMD 464
               ERVSHCGVLEFIAEEGMIYMPYWMMEN+LLQEG  VRVKN TLPKGKYVKLQPHT D
Sbjct: 63   DAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDTVRVKNVTLPKGKYVKLQPHTKD 122

Query: 465  FLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPANAISIIETDCEVDF 644
            FLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYYIDI+ETKP+NAISIIETDCEVDF
Sbjct: 123  FLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDF 182

Query: 645  APPLDYKEPERAVPAVPSSKAPTQVQEAPVEEEPKFNPFTGAGRRLDGKPLNYQPSPI-- 818
            APPLDYKEPE+ V +VP SKA +Q +E P E EPKFNPFTGAGRRLDGKPL+YQP P   
Sbjct: 183  APPLDYKEPEKPVASVPPSKATSQAEEVPAETEPKFNPFTGAGRRLDGKPLSYQPPPALS 242

Query: 819  SSEPKDKRPEASNGGGXXXXXXXXXXXXXXXXXGKLVFGSSANRA-XXXXXXXXXXXXXX 995
            SS  KDK+P  ++ G                  GKLVFGS+  R                
Sbjct: 243  SSVSKDKQPAVAD-GSRQPSLGSSSQNTARKSQGKLVFGSNTGRTPKETQREESGKETKQ 301

Query: 996  XXXXXXXXXXFQAFTGKKYSLKG 1064
                      FQAFTGKKYSLKG
Sbjct: 302  EQPEKKEEPKFQAFTGKKYSLKG 324