BLASTX nr result

ID: Cimicifuga21_contig00006350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006350
         (1440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF98369.1|AF158253_1 patatin-like protein 3 [Nicotiana tabacum]   211   e-106
ref|XP_003635410.1| PREDICTED: LOW QUALITY PROTEIN: patatin grou...   211   e-104
ref|XP_002451118.1| hypothetical protein SORBIDRAFT_05g024380 [S...   206   e-103
ref|XP_002262942.1| PREDICTED: patatin group A-3-like [Vitis vin...   204   e-103
emb|CBI25858.3| unnamed protein product [Vitis vinifera]              204   e-103

>gb|AAF98369.1|AF158253_1 patatin-like protein 3 [Nicotiana tabacum]
          Length = 411

 Score =  211 bits (536), Expect(2) = e-106
 Identities = 101/200 (50%), Positives = 144/200 (72%), Gaps = 14/200 (7%)
 Frame = +1

Query: 49  LIIMSTSARMLLDTNPPPS----KAKLITVLSIDAGGVRGIIPGTMLAYLESELQELDGP 216
           L+  +    ++L   PP +    K K++TVLS+D GG+RGIIPGT+LA+LES+LQELDGP
Sbjct: 6   LVAAALMTLLVLVLQPPMAFAVTKGKMVTVLSVDGGGIRGIIPGTVLAFLESKLQELDGP 65

Query: 217 DARIADYFDVISGTSTGGMTASLITAPNKDNRPLYAAKDINDFFLRHSAGIFTKNKN--- 387
           +AR+ADYFDV++GTSTGG+  +++TAPNKDNRPLY AKDI++F++ H   IF +++    
Sbjct: 66  NARLADYFDVVAGTSTGGLITTMLTAPNKDNRPLYQAKDISNFYMEHGPQIFPQSRRNSF 125

Query: 388 -------IKAHKYDPTYVRALFKDTFGDTTIAQYLTNVLIPAFDVKRIQPIVFTTLGANF 546
                      KYD  Y+R++     G+ T+ Q LTN +IP FD+KR+QPI+F+T  A  
Sbjct: 126 VRRVTNLFGGPKYDGKYLRSIINSILGNLTMKQTLTNTIIPTFDIKRLQPIIFSTADAKA 185

Query: 547 DVSKNIKVADICLSTTAAPT 606
           ++SKN +++DICLST+AAPT
Sbjct: 186 NISKNAQLSDICLSTSAAPT 205



 Score =  203 bits (517), Expect(2) = e-106
 Identities = 100/207 (48%), Positives = 143/207 (69%), Gaps = 1/207 (0%)
 Frame = +2

Query: 644  AAPTFFPAHYFQTKDSNGTIRSYNLIDGMIAASNPTLLAINLATEEIMRKNPDFENNNVV 823
            AAPT+FP HYF+TKD+ G  R+++L+DG +AA+NPTL+A+   +++IM  N  +E+   +
Sbjct: 202  AAPTYFPVHYFETKDAEGKTRTFDLVDGGLAANNPTLMAMTHISKQIMTGNFQYEDMEKM 261

Query: 824  DYNSYLILSLGTGEAKVEERFNAEMVSKWSNAEWMFYNNSQPLIEFYSSASADLADVHTS 1003
            D    L+LSLGTG  K EE++NA + S+W    W++ N + PLI+ Y+ ASAD+ D+H S
Sbjct: 262  DCKKVLVLSLGTGTGKHEEKYNATIASRWGMLGWIYNNGATPLIDVYADASADMVDIHVS 321

Query: 1004 VLFQSNNATNNYLRIQIDTLSGEDEEADNTTPKHLHKLVQIGNDLLKMPVSRVNLVQRRY 1183
             +FQ+  +  NY+RIQ D L+GE    D  T +++ +LVQIGNDLLK PVSRVNL   RY
Sbjct: 322  TMFQTLASEKNYIRIQDDNLTGEAASMDIATIENMGRLVQIGNDLLKKPVSRVNLETGRY 381

Query: 1184 DS-VGRSTNGEALAEYAKLLSDERKRR 1261
            +  V   TN  A+  +A+LLS+ERK R
Sbjct: 382  EPVVAEGTNEAAIIRFAQLLSEERKLR 408


>ref|XP_003635410.1| PREDICTED: LOW QUALITY PROTEIN: patatin group A-3-like [Vitis
           vinifera]
          Length = 388

 Score =  211 bits (536), Expect(2) = e-104
 Identities = 100/176 (56%), Positives = 135/176 (76%), Gaps = 8/176 (4%)
 Frame = +1

Query: 103 SKAKLITVLSIDAGGVRGIIPGTMLAYLESELQELDGPDARIADYFDVISGTSTGGMTAS 282
           ++ +++TVLSID GG+RGIIPGT+LA+LES+LQELDG +ARIADYFD+I+GTSTGG+  S
Sbjct: 6   TQGRMVTVLSIDGGGIRGIIPGTLLAFLESKLQELDGANARIADYFDIIAGTSTGGLVTS 65

Query: 283 LITAPNKDNRPLYAAKDINDFFLRHSAGIFTKN--------KNIKAHKYDPTYVRALFKD 438
           ++TAPNKDNRP+YAAKDIN+F+L H   IF +N              KYD  Y+R+L  +
Sbjct: 66  MLTAPNKDNRPIYAAKDINNFYLEHCPKIFPQNSTNPNTSVSGATGPKYDGKYLRSLTDE 125

Query: 439 TFGDTTIAQYLTNVLIPAFDVKRIQPIVFTTLGANFDVSKNIKVADICLSTTAAPT 606
             GD T+ Q LTNV+IP FD+K +QPI+F+T  A  +V+KN +++DIC+ T+AAPT
Sbjct: 126 LLGDLTLKQTLTNVVIPTFDIKLLQPIIFSTKDARTNVAKNARLSDICIGTSAAPT 181



 Score =  196 bits (499), Expect(2) = e-104
 Identities = 100/208 (48%), Positives = 137/208 (65%), Gaps = 2/208 (0%)
 Frame = +2

Query: 644  AAPTFFPAHYFQTKDSNGTIRSYNLIDGMIAASNPTLLAINLATEEI-MRKNPDFENNNV 820
            AAPT+ PAHYF+T+D++G  RS++LIDG  AA+NPTL+ I+  T+EI +  N   E  N 
Sbjct: 178  AAPTYLPAHYFETRDASGKTRSFDLIDGGXAANNPTLMGISQVTKEIILMHNSQSEEINP 237

Query: 821  VDYNSYLILSLGTGEAKVEERFNAEMVSKWSNAEWMFYNNSQPLIEFYSSASADLADVHT 1000
            +D    L+LSLGTG  K+EE++N    S W   EW+  N + PL++ Y  AS+D+ D+H 
Sbjct: 238  MDPKRMLVLSLGTGAPKLEEKYNGATASSWGPLEWLLDNGATPLLDIYGHASSDMVDIHV 297

Query: 1001 SVLFQSNNATNNYLRIQIDTLSGEDEEADNTTPKHLHKLVQIGNDLLKMPVSRVNLVQRR 1180
            S LFQS     NYLRIQ DTL+G+    D  T ++L +L +IG +LL+ PVSRVNL   +
Sbjct: 298  STLFQSRRCQKNYLRIQDDTLTGDASSVDIATVENLERLEEIGKELLEKPVSRVNLETGK 357

Query: 1181 YDS-VGRSTNGEALAEYAKLLSDERKRR 1261
            Y+  VG  TN  AL ++A LLS +RK R
Sbjct: 358  YEELVGEGTNRGALTQFAMLLSHQRKLR 385


>ref|XP_002451118.1| hypothetical protein SORBIDRAFT_05g024380 [Sorghum bicolor]
            gi|4539677|gb|AAD22170.1|AF061282_24 patatin-like protein
            [Sorghum bicolor] gi|241936961|gb|EES10106.1|
            hypothetical protein SORBIDRAFT_05g024380 [Sorghum
            bicolor]
          Length = 410

 Score =  206 bits (524), Expect(2) = e-103
 Identities = 100/211 (47%), Positives = 149/211 (70%), Gaps = 5/211 (2%)
 Frame = +2

Query: 644  AAPTFFPAHYFQTKDSNGTIRSYNLIDGMIAASNPTLLAINLATEEIMRKNPDFENNNVV 823
            AAPT+FPAH+F+T+ + G  R Y+L+DG +AA+NPT++A+++ T+E+ R+NPDF   NVV
Sbjct: 196  AAPTYFPAHFFKTEATGGRSREYHLVDGGVAANNPTMVAMSMLTKEVHRRNPDF---NVV 252

Query: 824  ----DYNSYLILSLGTGEAKVEERFNAEMVSKWSNAEWMFYNNSQPLIEFYSSASADLAD 991
                +Y +YL++S+GTG AK  E++ AE  +KW   +W+++    P+I+ +S AS+D+ D
Sbjct: 253  GRPTEYTNYLVISVGTGSAKQAEKYTAEQCAKWGLIQWLYHGGFTPIIDIFSHASSDMVD 312

Query: 992  VHTSVLFQSNNATNNYLRIQIDTLSGEDEEADNTTPKHLHKLVQIGNDLLKMPVSRVNLV 1171
            +H SVLFQ+ +   NYLRIQ D+L+G+    D  T +++  L+ IG +LLK PV+RVN+ 
Sbjct: 313  IHASVLFQALHCEKNYLRIQDDSLTGDASSVDIATKENMESLIGIGQELLKKPVARVNID 372

Query: 1172 QRRYDSV-GRSTNGEALAEYAKLLSDERKRR 1261
               Y+S  G  TN EALA +AK LSDERK R
Sbjct: 373  TGVYESCSGEGTNAEALAHFAKQLSDERKLR 403



 Score =  198 bits (504), Expect(2) = e-103
 Identities = 97/196 (49%), Positives = 133/196 (67%), Gaps = 12/196 (6%)
 Frame = +1

Query: 55  IMSTSARMLLDTNPPPSKAKLITVLSIDAGGVRGIIPGTMLAYLESELQELDGPDARIAD 234
           I  ++A       PPPSK KLIT+LSID GG+RG+IP T++AYLE++LQELDGPDARIAD
Sbjct: 4   ISKSTANCATVPQPPPSKGKLITILSIDGGGIRGLIPATIIAYLEAKLQELDGPDARIAD 63

Query: 235 YFDVISGTSTGGMTASLITAPNKDNRPLYAAKDINDFFLRHSAGIFTKNK---------- 384
           YFDVI+GTSTG +  S++ AP+ +NRPL+AAKD+  F+L +   IF + K          
Sbjct: 64  YFDVIAGTSTGALLTSMLAAPDDNNRPLFAAKDLTTFYLENGPKIFPQRKAGWLTPVANL 123

Query: 385 --NIKAHKYDPTYVRALFKDTFGDTTIAQYLTNVLIPAFDVKRIQPIVFTTLGANFDVSK 558
              ++  KYD  ++    K    D  +A  +TN+++PAFDVK +QPI+F+T  A  D  K
Sbjct: 124 IGTMRGPKYDGVFLHDKIKSLTHDVKVADTVTNIIVPAFDVKYLQPIIFSTYEAKTDALK 183

Query: 559 NIKVADICLSTTAAPT 606
           N  ++DIC+ST+AAPT
Sbjct: 184 NAHLSDICISTSAAPT 199


>ref|XP_002262942.1| PREDICTED: patatin group A-3-like [Vitis vinifera]
          Length = 397

 Score =  204 bits (518), Expect(2) = e-103
 Identities = 101/207 (48%), Positives = 143/207 (69%), Gaps = 1/207 (0%)
 Frame = +2

Query: 644  AAPTFFPAHYFQTKDSNGTIRSYNLIDGMIAASNPTLLAINLATEEIMRKNPDFENNNVV 823
            AAPT+ PAHYF+TK++NG  RS+NLIDG +AA+NPTL+A++  ++EI+  N  F     +
Sbjct: 187  AAPTYLPAHYFETKEANGKTRSFNLIDGGVAANNPTLVAMSHISKEILMDNTQFIEMKPM 246

Query: 824  DYNSYLILSLGTGEAKVEERFNAEMVSKWSNAEWMFYNNSQPLIEFYSSASADLADVHTS 1003
            D  S L+LSLGTG  K EE+++A   S+W    W + N + PL++ +S AS+D+ D+H S
Sbjct: 247  DSKSMLVLSLGTGAPKHEEKYSAAEASRWGLHRWAYNNGATPLLDIFSHASSDMVDIHVS 306

Query: 1004 VLFQSNNATNNYLRIQIDTLSGEDEEADNTTPKHLHKLVQIGNDLLKMPVSRVNLVQRRY 1183
             +FQS     NYLRIQ DTL+GE+   D  T ++L +L +IG +LL  P+SRVNL   R+
Sbjct: 307  TVFQSLGCEKNYLRIQDDTLTGEESSVDVATTENLQRLGEIGKELLAKPLSRVNLETGRH 366

Query: 1184 DSV-GRSTNGEALAEYAKLLSDERKRR 1261
            + + G  TN EAL ++AKLLS+ERK R
Sbjct: 367  EQLEGEGTNQEALTQFAKLLSEERKFR 393



 Score =  199 bits (507), Expect(2) = e-103
 Identities = 98/184 (53%), Positives = 133/184 (72%), Gaps = 17/184 (9%)
 Frame = +1

Query: 106 KAKLITVLSIDAGGVRGIIPGTMLAYLESELQELDGPDARIADYFDVISGTSTGGMTASL 285
           K +++TVLSID GGVRGIIPGT+LA+LES+ QELDG DARIADYFDVI+GTSTGG+  ++
Sbjct: 7   KGRMVTVLSIDGGGVRGIIPGTLLAFLESKFQELDGDDARIADYFDVIAGTSTGGLVTAM 66

Query: 286 ITAPNKDNRPLYAAKDINDFFLRHSAGIFTKNKNI-----------------KAHKYDPT 414
           +TAPNKDNRP++AAKDIN F+L H   IF +N+ I                 +  KY+  
Sbjct: 67  LTAPNKDNRPVFAAKDINSFYLDHCPEIFPQNRRISFGKSTISRFGSLIDAVRGPKYNGK 126

Query: 415 YVRALFKDTFGDTTIAQYLTNVLIPAFDVKRIQPIVFTTLGANFDVSKNIKVADICLSTT 594
           Y+++L  D      + Q LTNV+IP FD+K +QP++F+T  A  +V+KN +++DIC+ST+
Sbjct: 127 YLQSLAVDLLDKVYLKQTLTNVVIPTFDIKLLQPVIFSTDEAKVNVAKNARLSDICISTS 186

Query: 595 AAPT 606
           AAPT
Sbjct: 187 AAPT 190


>emb|CBI25858.3| unnamed protein product [Vitis vinifera]
          Length = 378

 Score =  204 bits (518), Expect(2) = e-103
 Identities = 101/207 (48%), Positives = 143/207 (69%), Gaps = 1/207 (0%)
 Frame = +2

Query: 644  AAPTFFPAHYFQTKDSNGTIRSYNLIDGMIAASNPTLLAINLATEEIMRKNPDFENNNVV 823
            AAPT+ PAHYF+TK++NG  RS+NLIDG +AA+NPTL+A++  ++EI+  N  F     +
Sbjct: 168  AAPTYLPAHYFETKEANGKTRSFNLIDGGVAANNPTLVAMSHISKEILMDNTQFIEMKPM 227

Query: 824  DYNSYLILSLGTGEAKVEERFNAEMVSKWSNAEWMFYNNSQPLIEFYSSASADLADVHTS 1003
            D  S L+LSLGTG  K EE+++A   S+W    W + N + PL++ +S AS+D+ D+H S
Sbjct: 228  DSKSMLVLSLGTGAPKHEEKYSAAEASRWGLHRWAYNNGATPLLDIFSHASSDMVDIHVS 287

Query: 1004 VLFQSNNATNNYLRIQIDTLSGEDEEADNTTPKHLHKLVQIGNDLLKMPVSRVNLVQRRY 1183
             +FQS     NYLRIQ DTL+GE+   D  T ++L +L +IG +LL  P+SRVNL   R+
Sbjct: 288  TVFQSLGCEKNYLRIQDDTLTGEESSVDVATTENLQRLGEIGKELLAKPLSRVNLETGRH 347

Query: 1184 DSV-GRSTNGEALAEYAKLLSDERKRR 1261
            + + G  TN EAL ++AKLLS+ERK R
Sbjct: 348  EQLEGEGTNQEALTQFAKLLSEERKFR 374



 Score =  199 bits (507), Expect(2) = e-103
 Identities = 96/171 (56%), Positives = 130/171 (76%), Gaps = 7/171 (4%)
 Frame = +1

Query: 115 LITVLSIDAGGVRGIIPGTMLAYLESELQELDGPDARIADYFDVISGTSTGGMTASLITA 294
           ++TVLSID GGVRGIIPGT+LA+LES+ QELDG DARIADYFDVI+GTSTGG+  +++TA
Sbjct: 1   MVTVLSIDGGGVRGIIPGTLLAFLESKFQELDGDDARIADYFDVIAGTSTGGLVTAMLTA 60

Query: 295 PNKDNRPLYAAKDINDFFLRHSAGIFTKNKN-------IKAHKYDPTYVRALFKDTFGDT 453
           PNKDNRP++AAKDIN F+L H   IF +N         ++  KY+  Y+++L  D     
Sbjct: 61  PNKDNRPVFAAKDINSFYLDHCPEIFPQNSRFGSLIDAVRGPKYNGKYLQSLAVDLLDKV 120

Query: 454 TIAQYLTNVLIPAFDVKRIQPIVFTTLGANFDVSKNIKVADICLSTTAAPT 606
            + Q LTNV+IP FD+K +QP++F+T  A  +V+KN +++DIC+ST+AAPT
Sbjct: 121 YLKQTLTNVVIPTFDIKLLQPVIFSTDEAKVNVAKNARLSDICISTSAAPT 171


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