BLASTX nr result

ID: Cimicifuga21_contig00006328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006328
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37573.3| unnamed protein product [Vitis vinifera]              292   7e-77
ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-l...   292   7e-77
ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207...   251   2e-64
ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communi...   249   7e-64
ref|XP_002328477.1| predicted protein [Populus trichocarpa] gi|2...   248   1e-63

>emb|CBI37573.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  292 bits (747), Expect = 7e-77
 Identities = 150/246 (60%), Positives = 171/246 (69%), Gaps = 4/246 (1%)
 Frame = -3

Query: 806  KKSSSYRITGFQFSPEDAQKVMITSADSKVRIFDGLDVIHKYRGLRKSGSQMSASFTSNG 627
            KK+S  +ITG QFS E++QKVMITS DSK+RI DG+DV++KY+GLRKSGSQMSASFTS G
Sbjct: 440  KKTSGNKITGIQFSQEESQKVMITSEDSKLRILDGIDVVYKYKGLRKSGSQMSASFTSTG 499

Query: 626  RHIISVGEDSRVYVWNYDGLCYGSSKQAKSTRSCEHFFFEGVSVAIPWLGTDPERM---D 456
            RHI+SVGEDSRVYVWNYDG C  SSKQ KS +SCEHFFFEGVSVAIPW  T  E+     
Sbjct: 500  RHIVSVGEDSRVYVWNYDGFCSQSSKQMKSVQSCEHFFFEGVSVAIPWSDTGAEKKGLGS 559

Query: 455  SSLQSSSQTVDRLVTSSMLSDPARFSFGGWFSMDSRLRGLATWPEEKLPLWSVPVEEGDP 276
             SL+ S  T D L  +S + D  RFS G WFSMD   RG ATWPEEKLPLW      G P
Sbjct: 560  DSLRQSPPTQDHLEATSWIRDSERFSLGNWFSMDGSCRGGATWPEEKLPLW------GAP 613

Query: 275  QHQHHCNYFDVQDQGNHYNKDHQQKHHP-HNNRAAAFSSTWGLVIVTGGCDGVIRTFQNY 99
            +H HH           H++   QQ+H+   N+   A S  WGLVI T G DG IRTF NY
Sbjct: 614  EHDHH-----------HHDHQQQQQHNDVQNHNHLALSEAWGLVIATAGWDGTIRTFHNY 662

Query: 98   GLPVRL 81
            GLPVRL
Sbjct: 663  GLPVRL 668


>ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 674

 Score =  292 bits (747), Expect = 7e-77
 Identities = 150/246 (60%), Positives = 171/246 (69%), Gaps = 4/246 (1%)
 Frame = -3

Query: 806  KKSSSYRITGFQFSPEDAQKVMITSADSKVRIFDGLDVIHKYRGLRKSGSQMSASFTSNG 627
            KK+S  +ITG QFS E++QKVMITS DSK+RI DG+DV++KY+GLRKSGSQMSASFTS G
Sbjct: 446  KKTSGNKITGIQFSQEESQKVMITSEDSKLRILDGIDVVYKYKGLRKSGSQMSASFTSTG 505

Query: 626  RHIISVGEDSRVYVWNYDGLCYGSSKQAKSTRSCEHFFFEGVSVAIPWLGTDPERM---D 456
            RHI+SVGEDSRVYVWNYDG C  SSKQ KS +SCEHFFFEGVSVAIPW  T  E+     
Sbjct: 506  RHIVSVGEDSRVYVWNYDGFCSQSSKQMKSVQSCEHFFFEGVSVAIPWSDTGAEKKGLGS 565

Query: 455  SSLQSSSQTVDRLVTSSMLSDPARFSFGGWFSMDSRLRGLATWPEEKLPLWSVPVEEGDP 276
             SL+ S  T D L  +S + D  RFS G WFSMD   RG ATWPEEKLPLW      G P
Sbjct: 566  DSLRQSPPTQDHLEATSWIRDSERFSLGNWFSMDGSCRGGATWPEEKLPLW------GAP 619

Query: 275  QHQHHCNYFDVQDQGNHYNKDHQQKHHP-HNNRAAAFSSTWGLVIVTGGCDGVIRTFQNY 99
            +H HH           H++   QQ+H+   N+   A S  WGLVI T G DG IRTF NY
Sbjct: 620  EHDHH-----------HHDHQQQQQHNDVQNHNHLALSEAWGLVIATAGWDGTIRTFHNY 668

Query: 98   GLPVRL 81
            GLPVRL
Sbjct: 669  GLPVRL 674


>ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207772 [Cucumis sativus]
            gi|449507515|ref|XP_004163054.1| PREDICTED:
            uncharacterized LOC101207772 [Cucumis sativus]
          Length = 668

 Score =  251 bits (640), Expect = 2e-64
 Identities = 132/249 (53%), Positives = 164/249 (65%), Gaps = 7/249 (2%)
 Frame = -3

Query: 806  KKSSSYRITGFQFSPEDAQKVMITSADSKVRIFDGLDVIHKYRGLRKSGSQMSASFTSNG 627
            KK+S  RITG QF  E++Q+VMITS DSKVRIF+G ++IHKY+GL KSGSQMSASFT NG
Sbjct: 436  KKASGKRITGIQFFRENSQRVMITSEDSKVRIFEGTEIIHKYKGLPKSGSQMSASFTKNG 495

Query: 626  RHIISVGEDSRVYVWNYDGLCYGSSKQAKSTRSCEHFFFEGVSVAIPW--LGTDPERMDS 453
            +HI+SVGEDSRVY+WNYD L   SSK+AKS +SCEHFF +GVSVAIPW  +GT+P    +
Sbjct: 496  KHIVSVGEDSRVYMWNYDSLFLPSSKEAKSQQSCEHFFSDGVSVAIPWSGVGTEPNCFSN 555

Query: 452  SLQSSSQTVDRLVTSSMLSDPARFSFGGWFSMDSRLRGLATWPEEKLPLWSVPV---EEG 282
            +    S   +    +S   +  RFS   WFS D   RG ATWPEE+LPLW +P+   E G
Sbjct: 556  NQALFSNRKNYQRAASWTRETDRFSLSNWFSADGLFRGSATWPEERLPLWDLPITEDENG 615

Query: 281  DPQHQHHCNYFDVQDQGNHYNKDHQQKHHPHN--NRAAAFSSTWGLVIVTGGCDGVIRTF 108
              QH H C               HQ+K + H   +   +   TWGLV+V  G DG I+TF
Sbjct: 616  SLQH-HDC---------------HQKKLNSHRDAHNDGSQLETWGLVMVVAGLDGTIKTF 659

Query: 107  QNYGLPVRL 81
             NYGLP++L
Sbjct: 660  HNYGLPIKL 668


>ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communis]
            gi|223543598|gb|EEF45127.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 654

 Score =  249 bits (635), Expect = 7e-64
 Identities = 131/243 (53%), Positives = 155/243 (63%), Gaps = 1/243 (0%)
 Frame = -3

Query: 806  KKSSSYRITGFQFSPEDAQKVMITSADSKVRIFDGLDVIHKYRGLRKSGSQMSASFTSNG 627
            K+++  RITG QFS E  Q+VMI+S DSK+RI DG+D++HKY+GL KSGSQMSASFTS G
Sbjct: 427  KRTAGNRITGIQFSQERPQRVMISSEDSKLRILDGVDIVHKYKGLPKSGSQMSASFTSGG 486

Query: 626  RHIISVGEDSRVYVWNYDGLCYGSSKQAKSTRSCEHFFFEGVSVAIPWLGTDPERMDSSL 447
            +HIISVGED RVYVW+YD LC  SSK  KS RSCEHFF EGVS+A+PW G   E  D   
Sbjct: 487  KHIISVGEDCRVYVWDYDELCTPSSKHKKSVRSCEHFFSEGVSIAVPWSGMRKELKDVDS 546

Query: 446  QSSSQTVDRLVTSSMLSDPARFSFGGWFSMDSRLRG-LATWPEEKLPLWSVPVEEGDPQH 270
             S    +     +S   D  RFS G WF +D   RG  ATWPEEKLP W + + E + QH
Sbjct: 547  GSIHSRMPSEEGTSRRRDSERFSLGNWFFIDGPCRGSSATWPEEKLPHWDIAMAEEECQH 606

Query: 269  QHHCNYFDVQDQGNHYNKDHQQKHHPHNNRAAAFSSTWGLVIVTGGCDGVIRTFQNYGLP 90
            QH+ N+           +    K H H        + WGLVI T G DG IRTF NYGLP
Sbjct: 607  QHYENF-----------QQQLIKTHGH----TTLPNAWGLVIATAGWDGTIRTFHNYGLP 651

Query: 89   VRL 81
            VRL
Sbjct: 652  VRL 654


>ref|XP_002328477.1| predicted protein [Populus trichocarpa] gi|222838192|gb|EEE76557.1|
            predicted protein [Populus trichocarpa]
          Length = 655

 Score =  248 bits (632), Expect = 1e-63
 Identities = 134/244 (54%), Positives = 160/244 (65%), Gaps = 2/244 (0%)
 Frame = -3

Query: 806  KKSSSYRITGFQFSPEDAQKVMITSADSKVRIFDGLDVIHKYRGLRKSGSQMSASFTSNG 627
            +++S  RIT  QFS E   +VMITS DSKVR+FDG+D+++K++GL KSGSQMSASFTSNG
Sbjct: 430  RRTSGNRITSIQFSQEICPRVMITSEDSKVRVFDGVDIVNKFKGLPKSGSQMSASFTSNG 489

Query: 626  RHIISVGEDSRVYVWNYDGLCYGSSKQAKSTRSCEHFFFEGVSVAIPWLGTDPE-RMDSS 450
            RHIISVGED RVYVWNYDGLC   SK  KS +SCE FF EGVSVA+PW GT  E R   S
Sbjct: 490  RHIISVGEDCRVYVWNYDGLCTSWSKHIKSVKSCEFFFSEGVSVAVPWSGTGTEVRGLGS 549

Query: 449  LQSSSQTVDRLVTSSMLSDPARFSFGGWFSMDSRLRG-LATWPEEKLPLWSVPVEEGDPQ 273
             +S ++      T+S   D  RFS G WF MD R RG  ATWPEEKLP+W VPV + + Q
Sbjct: 550  RRSLTEE-----TASWRKDSERFSLGSWFFMDGRCRGSYATWPEEKLPMWDVPVLDAEYQ 604

Query: 272  HQHHCNYFDVQDQGNHYNKDHQQKHHPHNNRAAAFSSTWGLVIVTGGCDGVIRTFQNYGL 93
            +Q                K   Q+   ++N   + S  WGLVIVT G DG IR F NYGL
Sbjct: 605  NQQ--------------IKSLHQQQCVNSNDHISLSEAWGLVIVTAGWDGKIRAFHNYGL 650

Query: 92   PVRL 81
            P+ L
Sbjct: 651  PIML 654


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