BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006316
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003573922.1| PREDICTED: F-box protein At5g07610-like [Bra...    72   5e-11
ref|XP_002467649.1| hypothetical protein SORBIDRAFT_01g031620 [S...    70   2e-10
gb|AFK44336.1| unknown [Lotus japonicus]                               65   4e-09
gb|EEC82186.1| hypothetical protein OsI_26322 [Oryza sativa Indi...    65   4e-09
ref|XP_003561635.1| PREDICTED: F-box protein At5g07610-like [Bra...    65   6e-09

>ref|XP_003573922.1| PREDICTED: F-box protein At5g07610-like [Brachypodium distachyon]
          Length = 406

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 50/129 (38%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
 Frame = +2

Query: 143 SFISDELVLEILIRVPVKTLFRSKCVCKQWRLLISDPSFVKRRKLLPPLITGLFYH--YL 316
           S ++D+L++EIL RVPVK+L R KCV + WR LI+ P++   RK LP  + G FY   Y 
Sbjct: 15  SLLTDDLIMEILCRVPVKSLHRFKCVSRSWRDLIAHPAY---RKKLPQTLAGFFYEISYY 71

Query: 317 NKKEVNFF-----SYFEIGIDSSFANLS-FLQRSVSVVASHNGLLLCAEKPTTTRSSVPC 478
                N+F     S   + +D S A L       + +V + NGLLLCA       SS   
Sbjct: 72  GGVRRNYFASISGSAATVDVDPSLAFLQPMAYTDIKLVDTRNGLLLCA-CYNKENSSTEH 130

Query: 479 GNNFYVCCP 505
              F VC P
Sbjct: 131 KLRFVVCNP 139


>ref|XP_002467649.1| hypothetical protein SORBIDRAFT_01g031620 [Sorghum bicolor]
           gi|241921503|gb|EER94647.1| hypothetical protein
           SORBIDRAFT_01g031620 [Sorghum bicolor]
          Length = 201

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
 Frame = +2

Query: 107 MELGQRRNIRIKSFISDELVLEILIRVPVKTLFRSKCVCKQWRLLISDPSFVKRRKLLPP 286
           M  G +      + ++D+L++EIL R+PVK++ R KCV K W  LIS P     RK LP 
Sbjct: 1   MAAGSKERRNPATCLTDDLIVEILSRLPVKSVCRFKCVSKHWLGLISHPD---HRKKLPQ 57

Query: 287 LITGLFYHYLNKKEV-----NFFSYFEIGIDSSFANLSFL--QRSVSVVASHNGLLLCAE 445
            + G+FYH  + +       +F +    G      +LSFL     ++++  +NGLLLC  
Sbjct: 58  TLAGIFYHTTSSELFPELVRHFTNVTGKGAPLISPSLSFLPGHADITLLDCYNGLLLC-- 115

Query: 446 KPTTTRSSVPCGNNFYVCC 502
                RS    G N YV C
Sbjct: 116 -----RSRTTAGANRYVVC 129


>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/65 (49%), Positives = 45/65 (69%)
 Frame = +2

Query: 119 QRRNIRIKSFISDELVLEILIRVPVKTLFRSKCVCKQWRLLISDPSFVKRRKLLPPLITG 298
           Q + + + +F+ DELV+EIL R+PVK+L + +CVCK W LLISDP F+K+   L    T 
Sbjct: 53  QNQAMAVATFLPDELVVEILSRLPVKSLLKFRCVCKSWMLLISDPYFIKKHLHLSKQST- 111

Query: 299 LFYHY 313
           LF H+
Sbjct: 112 LFNHH 116


>gb|EEC82186.1| hypothetical protein OsI_26322 [Oryza sativa Indica Group]
          Length = 720

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 7/124 (5%)
 Frame = +2

Query: 89  PPQEGNMELGQRRNIRIKSFISDELVLEILIRVPVKTLFRSKCVCKQWRLLISDPSFVKR 268
           PP E N+   +RRN      I+DEL++EIL R+PV+++ R KCV K WR LI+D    + 
Sbjct: 338 PPMEENLP-SRRRNPAAS--ITDELIVEILRRLPVRSVCRFKCVSKSWRKLIADH---EH 391

Query: 269 RKLLPPLITGLFYHYLNKKEV-----NFFSYFEIGIDSSFANLSFLQR--SVSVVASHNG 427
           RK LP  ++G FY  ++ +       +F +    G+       SFL +   V ++ S NG
Sbjct: 392 RKKLPQTLSGFFYKSIDYERCPHMARHFTNATGRGMPLVCPTFSFLPQCHHVVILDSCNG 451

Query: 428 LLLC 439
           LLLC
Sbjct: 452 LLLC 455


>ref|XP_003561635.1| PREDICTED: F-box protein At5g07610-like [Brachypodium distachyon]
          Length = 373

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
 Frame = +2

Query: 143 SFISDELVLEILIRVPVKTLFRSKCVCKQWRLLISDPSFVKRRKLLPPLITGLFYHYLNK 322
           SF++D+LV+EIL R+P ++L R KCV   W  L SDP+    RK  P  ++G FYH + K
Sbjct: 12  SFLTDDLVVEILSRLPYRSLCRFKCVSTSWLALCSDPAL---RKKSPQTLSGFFYHSVRK 68

Query: 323 KE--------VNFFSYFEIGIDSSFANLSFLQRSVSV--VASHNGLLLCA--EKPTTTRS 466
           ++         +F +    G      +LSFL     +  V   NGLLLC   + P+ +RS
Sbjct: 69  RDPFEPSDHRCHFTNLSGRGRPMVDPSLSFLPSCARILFVDCCNGLLLCRCFKMPSLSRS 128

Query: 467 SVPCGNNFYVCC 502
                  +YV C
Sbjct: 129 -------YYVVC 133