BLASTX nr result

ID: Cimicifuga21_contig00006303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006303
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238351.1| uncharacterized protein LOC100306406 precurs...   221   2e-55
ref|XP_002274525.1| PREDICTED: translocon-associated protein sub...   221   2e-55
emb|CBI21297.3| unnamed protein product [Vitis vinifera]              206   6e-55
ref|XP_004145695.1| PREDICTED: translocon-associated protein sub...   218   1e-54
ref|NP_001236342.1| uncharacterized protein LOC100500066 precurs...   217   2e-54

>ref|NP_001238351.1| uncharacterized protein LOC100306406 precursor [Glycine max]
           gi|255628433|gb|ACU14561.1| unknown [Glycine max]
          Length = 194

 Score =  221 bits (562), Expect = 2e-55
 Identities = 104/135 (77%), Positives = 122/135 (90%)
 Frame = +2

Query: 122 PFIVAHKKVSLTRLKSGSESVAVSIDIYNKGSATAYDVTLTDDSWPSDVFDLVSGKTSTS 301
           PFIVAHKK SL RLKSG+E V+V+IDIYN+G++TAYDV+L+DDSWPSD FD++SG TS S
Sbjct: 29  PFIVAHKKASLNRLKSGAERVSVTIDIYNQGTSTAYDVSLSDDSWPSDAFDVISGSTSKS 88

Query: 302 YEKLDAGAFVSHSFVLESKVKGVFHGAPAVLKFRVPTKAALQEAYSTPIQPLDILADRPP 481
           +E+LDAG  +SH+F LE+K KGVF G PAV+KFRVPTKAALQEAYSTPI PLD+L+DRPP
Sbjct: 89  WERLDAGGIISHTFELEAKSKGVFAGEPAVIKFRVPTKAALQEAYSTPILPLDVLSDRPP 148

Query: 482 EKKFEWAKRLLAKYG 526
           EKKFEWAKRLLAKYG
Sbjct: 149 EKKFEWAKRLLAKYG 163


>ref|XP_002274525.1| PREDICTED: translocon-associated protein subunit beta isoform 1
           [Vitis vinifera]
          Length = 191

 Score =  221 bits (562), Expect = 2e-55
 Identities = 107/135 (79%), Positives = 122/135 (90%)
 Frame = +2

Query: 122 PFIVAHKKVSLTRLKSGSESVAVSIDIYNKGSATAYDVTLTDDSWPSDVFDLVSGKTSTS 301
           PFIVAHKK SLTRLKSG+E V+VSIDIYN+GS TAYDV+LTDDSW  DVF++VSG TSTS
Sbjct: 25  PFIVAHKKASLTRLKSGAERVSVSIDIYNQGSTTAYDVSLTDDSWSQDVFNIVSGNTSTS 84

Query: 302 YEKLDAGAFVSHSFVLESKVKGVFHGAPAVLKFRVPTKAALQEAYSTPIQPLDILADRPP 481
           +E+LDAG  +SH+F LESKV+G+F+GAPAV+ FR+PT AALQEAYSTPI PLDILA RPP
Sbjct: 85  WERLDAGGLLSHAFELESKVEGMFYGAPAVITFRIPTTAALQEAYSTPILPLDILAVRPP 144

Query: 482 EKKFEWAKRLLAKYG 526
           EKKFEWAKRLLAKYG
Sbjct: 145 EKKFEWAKRLLAKYG 159


>emb|CBI21297.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  206 bits (523), Expect(2) = 6e-55
 Identities = 99/128 (77%), Positives = 114/128 (89%)
 Frame = +2

Query: 122 PFIVAHKKVSLTRLKSGSESVAVSIDIYNKGSATAYDVTLTDDSWPSDVFDLVSGKTSTS 301
           PFIVAHKK SLTRLKSG+E V+VSIDIYN+GS TAYDV+LTDDSW  DVF++VSG TSTS
Sbjct: 25  PFIVAHKKASLTRLKSGAERVSVSIDIYNQGSTTAYDVSLTDDSWSQDVFNIVSGNTSTS 84

Query: 302 YEKLDAGAFVSHSFVLESKVKGVFHGAPAVLKFRVPTKAALQEAYSTPIQPLDILADRPP 481
           +E+LDAG  +SH+F LESKV+G+F+GAPAV+ FR+PT AALQEAYSTPI PLDILA RPP
Sbjct: 85  WERLDAGGLLSHAFELESKVEGMFYGAPAVITFRIPTTAALQEAYSTPILPLDILAVRPP 144

Query: 482 EKKFEWAK 505
           EKKFEW K
Sbjct: 145 EKKFEWVK 152



 Score = 35.4 bits (80), Expect(2) = 6e-55
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +1

Query: 505 EVVGKIWFTCFCNLHYSFVCIPGCHPIEIQRCKDEQEKA 621
           +VVGKIW    C+LH   +C+ G   I+I+  + +QE+A
Sbjct: 152 KVVGKIWVPDLCDLHCVCLCVSGRQSIKIRCWERKQEEA 190


>ref|XP_004145695.1| PREDICTED: translocon-associated protein subunit beta-like isoform
           1 [Cucumis sativus] gi|449455916|ref|XP_004145696.1|
           PREDICTED: translocon-associated protein subunit
           beta-like isoform 2 [Cucumis sativus]
           gi|449492917|ref|XP_004159140.1| PREDICTED:
           translocon-associated protein subunit beta-like isoform
           1 [Cucumis sativus] gi|449492920|ref|XP_004159141.1|
           PREDICTED: translocon-associated protein subunit
           beta-like isoform 2 [Cucumis sativus]
          Length = 190

 Score =  218 bits (556), Expect = 1e-54
 Identities = 104/135 (77%), Positives = 121/135 (89%)
 Frame = +2

Query: 122 PFIVAHKKVSLTRLKSGSESVAVSIDIYNKGSATAYDVTLTDDSWPSDVFDLVSGKTSTS 301
           PFIVAHKK SLTRLKSG+E V+VSIDIYN+GS+TAYDV+L D SWP D+FD+VSG+TS S
Sbjct: 25  PFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNS 84

Query: 302 YEKLDAGAFVSHSFVLESKVKGVFHGAPAVLKFRVPTKAALQEAYSTPIQPLDILADRPP 481
           +E+LDAG  VSHSF LE+K +G+FHG+PAV+ FRVPTK+ALQEA STPI PLD+LADRPP
Sbjct: 85  WERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPP 144

Query: 482 EKKFEWAKRLLAKYG 526
           EKKFEW KRLLAKYG
Sbjct: 145 EKKFEWVKRLLAKYG 159


>ref|NP_001236342.1| uncharacterized protein LOC100500066 precursor [Glycine max]
           gi|255628939|gb|ACU14814.1| unknown [Glycine max]
          Length = 194

 Score =  217 bits (553), Expect = 2e-54
 Identities = 102/135 (75%), Positives = 122/135 (90%)
 Frame = +2

Query: 122 PFIVAHKKVSLTRLKSGSESVAVSIDIYNKGSATAYDVTLTDDSWPSDVFDLVSGKTSTS 301
           PFIVAHKK SL RLKSG+E V+V+IDI+N+G++TAYDV+L+DDSWPSD FD++SG TS S
Sbjct: 29  PFIVAHKKASLNRLKSGAERVSVTIDIFNQGTSTAYDVSLSDDSWPSDAFDVISGSTSKS 88

Query: 302 YEKLDAGAFVSHSFVLESKVKGVFHGAPAVLKFRVPTKAALQEAYSTPIQPLDILADRPP 481
           +E+LDAG  +SH+F LE+K KGVF G PAV+KFRVPTK+ALQEAYSTPI PLD+L+DRPP
Sbjct: 89  WERLDAGGILSHTFELEAKSKGVFAGEPAVIKFRVPTKSALQEAYSTPILPLDVLSDRPP 148

Query: 482 EKKFEWAKRLLAKYG 526
           EKKFEWAKRLLAKYG
Sbjct: 149 EKKFEWAKRLLAKYG 163


Top