BLASTX nr result

ID: Cimicifuga21_contig00006290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006290
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534507.1| membrane associated ring finger 1,8, putativ...   126   2e-27
ref|XP_002280349.2| PREDICTED: uncharacterized protein LOC100259...   125   4e-27
ref|XP_002312427.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_004150858.1| PREDICTED: uncharacterized protein LOC101213...   115   4e-24
ref|XP_002532634.1| membrane associated ring finger 1,8, putativ...   105   5e-21

>ref|XP_002534507.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223525156|gb|EEF27877.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 242

 Score =  126 bits (316), Expect = 2e-27
 Identities = 63/82 (76%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
 Frame = +1

Query: 262 MGDHFVLLVDRLLTESTLEAAIESRNRSLQATPSAIEAAKAEFFSPKKDFGD-GSPTKMV 438
           MGDHFVLLVDRLLTESTLEAAI SRN+ LQAT SA+   K +  S K DFGD  +P K+V
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAITSRNQLLQATESAVGETKIDISSKKVDFGDVSTPGKIV 60

Query: 439 ECRICQDEDEDSNMETPCSCCG 504
           ECRICQDEDEDSNMETPCSCCG
Sbjct: 61  ECRICQDEDEDSNMETPCSCCG 82


>ref|XP_002280349.2| PREDICTED: uncharacterized protein LOC100259487 [Vitis vinifera]
          Length = 240

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/82 (78%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
 Frame = +1

Query: 262 MGDHFVLLVDRLLTESTLEAAIESRNRSLQATPSAIEAAKAEFFSPKKDFGDG-SPTKMV 438
           MGDHFVLLVDRLLTESTLEAAIESRNR +QA+ SAI   K +  S K DF  G SP K+V
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESRNRLMQASVSAIADTKVDCKSHKMDFKHGSSPRKLV 60

Query: 439 ECRICQDEDEDSNMETPCSCCG 504
           ECRICQDEDEDSNMETPCSCCG
Sbjct: 61  ECRICQDEDEDSNMETPCSCCG 82


>ref|XP_002312427.1| predicted protein [Populus trichocarpa] gi|222852247|gb|EEE89794.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/82 (73%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
 Frame = +1

Query: 262 MGDHFVLLVDRLLTESTLEAAIESRNRSLQATPSAIEAAKAEFFSPKKDFGD-GSPTKMV 438
           MGDHFVLLV+RLLTESTLEAAIESRN S+QAT S ++  K +    K DFGD  +P K+V
Sbjct: 1   MGDHFVLLVNRLLTESTLEAAIESRNLSMQATASTVDDTKIDKSFQKMDFGDISTPRKLV 60

Query: 439 ECRICQDEDEDSNMETPCSCCG 504
           ECRICQDED+DSNMETPCSCCG
Sbjct: 61  ECRICQDEDDDSNMETPCSCCG 82


>ref|XP_004150858.1| PREDICTED: uncharacterized protein LOC101213226 [Cucumis sativus]
           gi|449523283|ref|XP_004168653.1| PREDICTED:
           uncharacterized LOC101213226 [Cucumis sativus]
          Length = 271

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/82 (71%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
 Frame = +1

Query: 262 MGDHFVLLVDRLLTESTLEAAIESRNRSLQATPSAIEAAKAEFFSPKKDFGD-GSPTKMV 438
           MGDHFVLLVDRLLTESTLEAAIESR  S +AT SA++  K +  S    F +  SP K+V
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESRKPSTEATSSAMDGLKRDKSSTDMGFDNVQSPKKIV 60

Query: 439 ECRICQDEDEDSNMETPCSCCG 504
           ECRICQDEDEDSNMETPCSCCG
Sbjct: 61  ECRICQDEDEDSNMETPCSCCG 82


>ref|XP_002532634.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223527625|gb|EEF29737.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 209

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/82 (64%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
 Frame = +1

Query: 262 MGDHFVLLVDRLLTESTLEAAIESRNRSLQATPSAIEAAKAEFFSPKKDFG-DGSPTKMV 438
           MGDHFVLLVDRLLTESTLEAAIES+N   QA P A +    +  + + D     SP K+V
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESKNHWQQAIPPASQDNTTDCSTHRMDVDFRSSPEKLV 60

Query: 439 ECRICQDEDEDSNMETPCSCCG 504
           ECRIC DEDED+NME PCSCCG
Sbjct: 61  ECRICHDEDEDTNMEVPCSCCG 82


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