BLASTX nr result

ID: Cimicifuga21_contig00006285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006285
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240123.1| uncharacterized protein LOC100814427 [Glycin...   100   4e-19
ref|NP_001149648.1| ribosomal protein L35 containing protein pre...   100   4e-19
ref|XP_003534307.1| PREDICTED: uncharacterized protein LOC100808...   100   5e-19
ref|XP_002464859.1| hypothetical protein SORBIDRAFT_01g027760 [S...   100   5e-19
gb|ACU24149.1| unknown [Glycine max]                                   99   1e-18

>ref|NP_001240123.1| uncharacterized protein LOC100814427 [Glycine max]
           gi|255647090|gb|ACU24013.1| unknown [Glycine max]
          Length = 156

 Score =  100 bits (249), Expect = 4e-19
 Identities = 54/93 (58%), Positives = 63/93 (67%)
 Frame = -2

Query: 565 PLSALNQSRHVSSSKERRLKRLTPAVSKLKKYKIKPYSSFKSRFRTLIGGQIRRWHAGKR 386
           P  +L Q RH +SSKER+ K + P VSK+KK K+K YSSFKSRFRT+  G IRRW  GKR
Sbjct: 63  PSPSLVQVRH-ASSKERKRKPVPPTVSKVKKTKMKSYSSFKSRFRTMNDGNIRRWKEGKR 121

Query: 385 HNAHXXXXXXXXXXXRPAVVHPAYAKVMKKLNF 287
           HNAH           +P +V  AYAKVMKKLNF
Sbjct: 122 HNAHLKSKKSKRRLRKPGIVPVAYAKVMKKLNF 154


>ref|NP_001149648.1| ribosomal protein L35 containing protein precursor [Zea mays]
           gi|195628799|gb|ACG36227.1| ribosomal protein L35
           containing protein [Zea mays]
           gi|223943669|gb|ACN25918.1| unknown [Zea mays]
           gi|414867976|tpg|DAA46533.1| TPA: Ribosomal protein L35
           containing protein [Zea mays]
          Length = 163

 Score =  100 bits (249), Expect = 4e-19
 Identities = 54/98 (55%), Positives = 63/98 (64%)
 Frame = -2

Query: 574 SFTPLSALNQSRHVSSSKERRLKRLTPAVSKLKKYKIKPYSSFKSRFRTLIGGQIRRWHA 395
           SF P SA +Q     + KER    LTP  SK+KKYK+K  SS K RFRT+  GQ+RRW A
Sbjct: 66  SFRPPSAHHQQVRHYAKKERSRAPLTPTKSKVKKYKMKAPSSMKFRFRTMKDGQVRRWRA 125

Query: 394 GKRHNAHXXXXXXXXXXXRPAVVHPAYAKVMKKLNFYG 281
           GKRHNAH           +PA+VH AYAKV+KKLNF G
Sbjct: 126 GKRHNAHLKSKEAKRRLRKPALVHLAYAKVIKKLNFCG 163


>ref|XP_003534307.1| PREDICTED: uncharacterized protein LOC100808184 [Glycine max]
          Length = 155

 Score =  100 bits (248), Expect = 5e-19
 Identities = 53/94 (56%), Positives = 63/94 (67%)
 Frame = -2

Query: 565 PLSALNQSRHVSSSKERRLKRLTPAVSKLKKYKIKPYSSFKSRFRTLIGGQIRRWHAGKR 386
           P  +L Q RH +SSKER+ K + P VSK+KK K+K YSSFKSRFR +  G IRRW  GKR
Sbjct: 62  PSPSLVQVRH-ASSKERKRKPVPPTVSKVKKTKMKSYSSFKSRFRAMNDGNIRRWKEGKR 120

Query: 385 HNAHXXXXXXXXXXXRPAVVHPAYAKVMKKLNFY 284
           HNAH           +P +V  AYAKVMKKLNF+
Sbjct: 121 HNAHLKSKKSKRRLRKPGIVPAAYAKVMKKLNFF 154


>ref|XP_002464859.1| hypothetical protein SORBIDRAFT_01g027760 [Sorghum bicolor]
           gi|241918713|gb|EER91857.1| hypothetical protein
           SORBIDRAFT_01g027760 [Sorghum bicolor]
          Length = 164

 Score =  100 bits (248), Expect = 5e-19
 Identities = 54/97 (55%), Positives = 62/97 (63%)
 Frame = -2

Query: 571 FTPLSALNQSRHVSSSKERRLKRLTPAVSKLKKYKIKPYSSFKSRFRTLIGGQIRRWHAG 392
           F P SA +Q     + KER    LTP  SK+KKYKIK  SS K RFRT+  GQ+RRW AG
Sbjct: 68  FRPPSAHHQQVRHYAKKERSRAPLTPTKSKVKKYKIKAPSSMKFRFRTMKDGQVRRWRAG 127

Query: 391 KRHNAHXXXXXXXXXXXRPAVVHPAYAKVMKKLNFYG 281
           KRHNAH           +PA+VH AYAKV+KKLNF G
Sbjct: 128 KRHNAHLKSKEAKRRLRKPALVHLAYAKVIKKLNFCG 164


>gb|ACU24149.1| unknown [Glycine max]
          Length = 155

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 52/94 (55%), Positives = 62/94 (65%)
 Frame = -2

Query: 565 PLSALNQSRHVSSSKERRLKRLTPAVSKLKKYKIKPYSSFKSRFRTLIGGQIRRWHAGKR 386
           P  +L Q RH +SSKER+ K + P VSK+KK K+K YSSFKSRFR +  G IRRW  GKR
Sbjct: 62  PSPSLVQVRH-ASSKERKRKPVPPTVSKVKKTKMKSYSSFKSRFRAMNDGNIRRWKEGKR 120

Query: 385 HNAHXXXXXXXXXXXRPAVVHPAYAKVMKKLNFY 284
           HNAH           +P +V  AY KVMKKLNF+
Sbjct: 121 HNAHLKSKKSKRRLRKPGIVPAAYTKVMKKLNFF 154