BLASTX nr result

ID: Cimicifuga21_contig00006283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006283
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACI13681.1| putative auxin response factor ARF16 [Malus x dom...    73   3e-11
ref|XP_002311089.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_003553551.1| PREDICTED: auxin response factor 18-like [Gl...    66   3e-09
ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cu...    65   8e-09
ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vi...    65   8e-09

>gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/61 (59%), Positives = 42/61 (68%)
 Frame = -3

Query: 185 LPFGGYSAILRENERKIMRXXXXXXXXXXXGFKVKGKVRPESVIEAATLAANGQPFEVVY 6
           +P+GG+SA LRE+E K+M+               KGKV PESV EAATLAANGQPFEVVY
Sbjct: 245 VPYGGFSAFLREDENKLMKNGHGNGSNSNGSLMGKGKVGPESVFEAATLAANGQPFEVVY 304

Query: 5   Y 3
           Y
Sbjct: 305 Y 305


>ref|XP_002311089.1| predicted protein [Populus trichocarpa] gi|222850909|gb|EEE88456.1|
           predicted protein [Populus trichocarpa]
          Length = 671

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/59 (61%), Positives = 41/59 (69%)
 Frame = -3

Query: 179 FGGYSAILRENERKIMRXXXXXXXXXXXGFKVKGKVRPESVIEAATLAANGQPFEVVYY 3
           FGGYS  LRE+E K+ R              +KGKV+PESVIEAA+LAANGQPFEVVYY
Sbjct: 233 FGGYSGFLREDESKLTRRNGNGD--------MKGKVKPESVIEAASLAANGQPFEVVYY 283


>ref|XP_003553551.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 688

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/61 (55%), Positives = 42/61 (68%)
 Frame = -3

Query: 185 LPFGGYSAILRENERKIMRXXXXXXXXXXXGFKVKGKVRPESVIEAATLAANGQPFEVVY 6
           +P+GG+SA LRE + +++R               KGKVRPE+VIEAATLAAN QPFEVVY
Sbjct: 243 MPYGGFSAFLREEDSQLLRNGLSP--------NAKGKVRPEAVIEAATLAANMQPFEVVY 294

Query: 5   Y 3
           Y
Sbjct: 295 Y 295


>ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
           gi|449531181|ref|XP_004172566.1| PREDICTED: auxin
           response factor 18-like [Cucumis sativus]
          Length = 716

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 31/60 (51%), Positives = 40/60 (66%)
 Frame = -3

Query: 182 PFGGYSAILRENERKIMRXXXXXXXXXXXGFKVKGKVRPESVIEAATLAANGQPFEVVYY 3
           P+GG +  LR+++ K+ R             + KGKVRPESV+EAA LAA+GQPFEVVYY
Sbjct: 237 PYGGLTMFLRDDDNKLSRKGSLSSSGSGGNLRGKGKVRPESVMEAAALAASGQPFEVVYY 296


>ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 701

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/69 (46%), Positives = 41/69 (59%)
 Frame = -3

Query: 209 NTHQCHIALPFGGYSAILRENERKIMRXXXXXXXXXXXGFKVKGKVRPESVIEAATLAAN 30
           N   C+  +P+GG+SA LRE+E K+ R            F  + KV  E+VIEA  LA N
Sbjct: 235 NPAGCNYVMPYGGFSAFLREDENKLTRNGNGGSSGSNGSFFGRVKVTAEAVIEAVRLAVN 294

Query: 29  GQPFEVVYY 3
           GQPFEV+YY
Sbjct: 295 GQPFEVIYY 303


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