BLASTX nr result

ID: Cimicifuga21_contig00006281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006281
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316305.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
gb|AEY76110.1| Cys2/His2-type zinc finger protein [Chrysanthemum...    64   2e-08
ref|XP_002879670.1| zinc finger family protein [Arabidopsis lyra...    62   5e-08
ref|XP_002528469.1| nucleic acid binding protein, putative [Rici...    61   8e-08
dbj|BAA21923.1| ZPT2-14 [Petunia x hybrida]                            61   1e-07

>ref|XP_002316305.1| predicted protein [Populus trichocarpa] gi|222865345|gb|EEF02476.1|
           predicted protein [Populus trichocarpa]
           gi|355477194|gb|AES12473.1| C2H2-type zinc finger
           protein 1 [Populus trichocarpa]
          Length = 179

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/59 (61%), Positives = 39/59 (66%)
 Frame = -2

Query: 214 ALGGHMRRHRAXXXXXXXXXXXXXXSPPLQVAVPVFRRSNSKRVLCLDLNLTPLENDLE 38
           ALGGHMRRHRA              S   Q AVPV +RSNS+RVLCLDLNLTP END+E
Sbjct: 106 ALGGHMRRHRAALNDRNQVDPLNPPSTDDQKAVPVVKRSNSRRVLCLDLNLTPYENDME 164


>gb|AEY76110.1| Cys2/His2-type zinc finger protein [Chrysanthemum x morifolium]
          Length = 178

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/65 (50%), Positives = 40/65 (61%)
 Frame = -2

Query: 214 ALGGHMRRHRAXXXXXXXXXXXXXXSPPLQVAVPVFRRSNSKRVLCLDLNLTPLENDLEF 35
           ALGGHMRRHRA                PL ++ PV ++ NS+RV  LDLNLTPLEND EF
Sbjct: 109 ALGGHMRRHRAATTTENHASL------PLDLSTPVVKKVNSRRVFSLDLNLTPLENDFEF 162

Query: 34  PIQNE 20
            + +E
Sbjct: 163 RVDDE 167


>ref|XP_002879670.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325509|gb|EFH55929.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 178

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/71 (50%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
 Frame = -2

Query: 214 ALGGHMRRHRAXXXXXXXXXXXXXXSPPLQVAVPVFRR-SNSKRVLCLDLNLTPLENDLE 38
           ALGGHMRRHR+                P+   +PV +R S+SKRVLCLDLNLTPLENDLE
Sbjct: 108 ALGGHMRRHRSSMTVEPSFIS------PVIPTMPVLKRCSSSKRVLCLDLNLTPLENDLE 161

Query: 37  FPIQNEFLENI 5
           +     F+  I
Sbjct: 162 YIFGKTFVPKI 172


>ref|XP_002528469.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223532145|gb|EEF33952.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 190

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/66 (53%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
 Frame = -2

Query: 214 ALGGHMRRHRAXXXXXXXXXXXXXXSP-------PLQVAVPVFRRSNSKRVLCLDLNLTP 56
           ALGGHMRRHRA              S        P  VA PV ++SNS+RVLCLDLNLTP
Sbjct: 110 ALGGHMRRHRAINNDSSSLSTPSPTSSAELMAVKPAGVAPPVMKKSNSRRVLCLDLNLTP 169

Query: 55  LENDLE 38
            END+E
Sbjct: 170 YENDVE 175


>dbj|BAA21923.1| ZPT2-14 [Petunia x hybrida]
          Length = 166

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/63 (58%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = -2

Query: 214 ALGGHMRRHRAXXXXXXXXXXXXXXSPPLQVAVPVFRRSNSKRVLCLDLNLTPLEND-LE 38
           ALGGHMRRHRA                 LQV  PV ++SNS+RVLCLDLNLTPLEND LE
Sbjct: 105 ALGGHMRRHRAVMNENN-----------LQVT-PVVKKSNSRRVLCLDLNLTPLENDNLE 152

Query: 37  FPI 29
           F +
Sbjct: 153 FKL 155


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