BLASTX nr result

ID: Cimicifuga21_contig00006279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006279
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880273.1| plastid-lipid associated protein pap [Arabid...   330   4e-88
ref|NP_566091.1| putative plastid-lipid-associated protein 10 [A...   328   2e-87
gb|AAM62945.1| unknown [Arabidopsis thaliana]                         328   2e-87
gb|ABD39695.1| fibrillin 8 [Coffea canephora]                         326   5e-87
ref|XP_002270341.1| PREDICTED: probable plastid-lipid-associated...   324   2e-86

>ref|XP_002880273.1| plastid-lipid associated protein pap [Arabidopsis lyrata subsp.
           lyrata] gi|297326112|gb|EFH56532.1| plastid-lipid
           associated protein pap [Arabidopsis lyrata subsp.
           lyrata]
          Length = 283

 Score =  330 bits (845), Expect = 4e-88
 Identities = 168/233 (72%), Positives = 197/233 (84%), Gaps = 2/233 (0%)
 Frame = -2

Query: 838 TTRNNTREYELESKKHELLRATQDTQRGLLSTPDQRSSIEEALVCVEKYDAGSTIDLNKL 659
           T R    E +LE KKH+LLRA QDTQRGL +T DQRS IEEALV VE ++ G  IDL KL
Sbjct: 49  TARVVDNELDLEHKKHDLLRAVQDTQRGLTATSDQRSIIEEALVTVEGFNGGEEIDLVKL 108

Query: 658 DGTWRLQYTSAPDVVGLFESAARLPFFQVGQIFQKFECRDQSDGGIVRNVVRWSIPSLLE 479
           DGTWRLQYTSAPDVV LFE+A+RLPFFQVGQ+FQKFECRD+SDGGI+RNVV+WS+PSLLE
Sbjct: 109 DGTWRLQYTSAPDVVVLFEAASRLPFFQVGQVFQKFECRDRSDGGIIRNVVQWSLPSLLE 168

Query: 478 EEEGATLLVSANFSIISKRNIYLQFEEISVQDIKINEDLQAVIAPALLPRTFLSLQILQF 299
           E+EGATL+V+A F  +  RNIYLQFEEISV++I INE LQA+IAPA+LPR+FLSLQ+LQF
Sbjct: 169 EQEGATLVVTAKFDKVCSRNIYLQFEEISVRNININEQLQALIAPAILPRSFLSLQLLQF 228

Query: 298 LQTFKAQVPV--TSPGRQSVGGLYYLSYLDRDMLLGRAXXXXXXXXFTKAQPL 146
           ++TFKAQ+PV  TSPGR+SVGGLYYLSYLD +MLLGR+        FTK+QPL
Sbjct: 229 IRTFKAQIPVTATSPGRRSVGGLYYLSYLDNNMLLGRSVGGGGVFVFTKSQPL 281


>ref|NP_566091.1| putative plastid-lipid-associated protein 10 [Arabidopsis thaliana]
           gi|75162466|sp|Q8W4F1.1|PAP10_ARATH RecName:
           Full=Probable plastid-lipid-associated protein 10,
           chloroplastic; AltName: Full=Fibrillin-10; Flags:
           Precursor gi|17065042|gb|AAL32675.1| Unknown protein
           [Arabidopsis thaliana] gi|20197139|gb|AAC34229.2|
           Expressed protein [Arabidopsis thaliana]
           gi|20259994|gb|AAM13344.1| unknown protein [Arabidopsis
           thaliana] gi|330255676|gb|AEC10770.1| putative
           plastid-lipid-associated protein 10 [Arabidopsis
           thaliana]
          Length = 284

 Score =  328 bits (840), Expect = 2e-87
 Identities = 166/226 (73%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
 Frame = -2

Query: 817 EYELESKKHELLRATQDTQRGLLSTPDQRSSIEEALVCVEKYDAGSTIDLNKLDGTWRLQ 638
           E +LE KKH+LLRA QDTQRGL +T DQRS IEEALV VE ++ G  ID  KLDGTWRLQ
Sbjct: 57  ELDLEHKKHDLLRAVQDTQRGLTATSDQRSIIEEALVTVEGFNGGEEIDPVKLDGTWRLQ 116

Query: 637 YTSAPDVVGLFESAARLPFFQVGQIFQKFECRDQSDGGIVRNVVRWSIPSLLEEEEGATL 458
           YTSAPDVV LFE+A+RLPFFQVGQ+FQKFECRD+SDGGI+RNVV+WS+PSLLEE+EGATL
Sbjct: 117 YTSAPDVVVLFEAASRLPFFQVGQVFQKFECRDRSDGGIIRNVVQWSLPSLLEEQEGATL 176

Query: 457 LVSANFSIISKRNIYLQFEEISVQDIKINEDLQAVIAPALLPRTFLSLQILQFLQTFKAQ 278
           +V+A F  +S RNIYLQFEEISV++I INE LQA+IAPA+LPR+FLSLQ+LQF++TFKAQ
Sbjct: 177 VVTAKFDKVSSRNIYLQFEEISVRNININEQLQALIAPAILPRSFLSLQLLQFIRTFKAQ 236

Query: 277 VPV--TSPGRQSVGGLYYLSYLDRDMLLGRAXXXXXXXXFTKAQPL 146
           +PV  TSPGR+SVGGLYYLSYLD +MLLGR+        FTK+QPL
Sbjct: 237 IPVNATSPGRRSVGGLYYLSYLDNNMLLGRSVGGGGVFVFTKSQPL 282


>gb|AAM62945.1| unknown [Arabidopsis thaliana]
          Length = 284

 Score =  328 bits (840), Expect = 2e-87
 Identities = 166/226 (73%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
 Frame = -2

Query: 817 EYELESKKHELLRATQDTQRGLLSTPDQRSSIEEALVCVEKYDAGSTIDLNKLDGTWRLQ 638
           E +LE KKH+LLRA QDTQRGL +T DQRS IEEALV VE ++ G  ID  KLDGTWRLQ
Sbjct: 57  ELDLEHKKHDLLRAVQDTQRGLTATSDQRSIIEEALVTVEGFNGGEEIDPVKLDGTWRLQ 116

Query: 637 YTSAPDVVGLFESAARLPFFQVGQIFQKFECRDQSDGGIVRNVVRWSIPSLLEEEEGATL 458
           YTSAPDVV LFE+A+RLPFFQVGQ+FQKFECRD+SDGGI+RNVV+WS+PSLLEE+EGATL
Sbjct: 117 YTSAPDVVVLFEAASRLPFFQVGQVFQKFECRDRSDGGIIRNVVQWSLPSLLEEQEGATL 176

Query: 457 LVSANFSIISKRNIYLQFEEISVQDIKINEDLQAVIAPALLPRTFLSLQILQFLQTFKAQ 278
           +V+A F  +S RNIYLQFEEISV++I INE LQA+IAPA+LPR+FLSLQ+LQF++TFKAQ
Sbjct: 177 VVTAKFDKVSSRNIYLQFEEISVRNININEQLQALIAPAILPRSFLSLQLLQFIRTFKAQ 236

Query: 277 VPV--TSPGRQSVGGLYYLSYLDRDMLLGRAXXXXXXXXFTKAQPL 146
           +PV  TSPGR+SVGGLYYLSYLD +MLLGR+        FTK+QPL
Sbjct: 237 IPVNATSPGRRSVGGLYYLSYLDNNMLLGRSVGGGGVFVFTKSQPL 282


>gb|ABD39695.1| fibrillin 8 [Coffea canephora]
          Length = 279

 Score =  326 bits (836), Expect = 5e-87
 Identities = 162/224 (72%), Positives = 192/224 (85%)
 Frame = -2

Query: 817 EYELESKKHELLRATQDTQRGLLSTPDQRSSIEEALVCVEKYDAGSTIDLNKLDGTWRLQ 638
           E ELE KK+ELLR  QDTQRGL++T DQRSSIEEALV VE +DAG  IDL +LDGTWRLQ
Sbjct: 54  ETELEDKKYELLRVIQDTQRGLVTTADQRSSIEEALVSVEAFDAGEAIDLGELDGTWRLQ 113

Query: 637 YTSAPDVVGLFESAARLPFFQVGQIFQKFECRDQSDGGIVRNVVRWSIPSLLEEEEGATL 458
           YTSAPDV+ LFESA+RLPFFQVGQ+FQKFEC+D+S+GG+VRN+V+WSIPSLLEE+EGATL
Sbjct: 114 YTSAPDVLILFESASRLPFFQVGQVFQKFECQDESNGGVVRNIVKWSIPSLLEEQEGATL 173

Query: 457 LVSANFSIISKRNIYLQFEEISVQDIKINEDLQAVIAPALLPRTFLSLQILQFLQTFKAQ 278
           LVSA FS++S RNIY QFEEI+   I I+E+LQA+IAPA+LPR+F+SLQILQF++ FKA+
Sbjct: 174 LVSAKFSVVSSRNIYFQFEEIAFNKINISEELQALIAPAILPRSFISLQILQFIRAFKAE 233

Query: 277 VPVTSPGRQSVGGLYYLSYLDRDMLLGRAXXXXXXXXFTKAQPL 146
            PV +PGR SVGGLYYLSYLDR MLLGRA        FT+AQ +
Sbjct: 234 FPVRNPGRNSVGGLYYLSYLDRYMLLGRAVGGGGVFVFTRAQAI 277


>ref|XP_002270341.1| PREDICTED: probable plastid-lipid-associated protein 10,
           chloroplastic [Vitis vinifera]
           gi|296089046|emb|CBI38749.3| unnamed protein product
           [Vitis vinifera]
          Length = 278

 Score =  324 bits (830), Expect = 2e-86
 Identities = 167/234 (71%), Positives = 195/234 (83%)
 Frame = -2

Query: 847 SAVTTRNNTREYELESKKHELLRATQDTQRGLLSTPDQRSSIEEALVCVEKYDAGSTIDL 668
           +  T      E+ LE KKH+LLRA QDTQRGL++T DQRS IEEALV VE+Y+AG  IDL
Sbjct: 45  ATATPTTQAAEFVLEEKKHDLLRAIQDTQRGLVATADQRSCIEEALVNVEEYNAGVPIDL 104

Query: 667 NKLDGTWRLQYTSAPDVVGLFESAARLPFFQVGQIFQKFECRDQSDGGIVRNVVRWSIPS 488
            KLDGTWRLQYTSAPDV+ L ESAAR  FFQVGQIFQKFEC++QS  G+VRNVVRWSIP 
Sbjct: 105 GKLDGTWRLQYTSAPDVLVLLESAARFSFFQVGQIFQKFECQNQSKEGVVRNVVRWSIPP 164

Query: 487 LLEEEEGATLLVSANFSIISKRNIYLQFEEISVQDIKINEDLQAVIAPALLPRTFLSLQI 308
           LLEE+EGATLLVSA FS++S RNIYLQFEEIS+Q I I+E+LQA+IAPA+LPR+FLSLQI
Sbjct: 165 LLEEQEGATLLVSAKFSVVSARNIYLQFEEISIQSINISEELQALIAPAILPRSFLSLQI 224

Query: 307 LQFLQTFKAQVPVTSPGRQSVGGLYYLSYLDRDMLLGRAXXXXXXXXFTKAQPL 146
           LQF++TFKA++PV + GR+SVGGLYYLSYLD +MLLGRA        FT+AQPL
Sbjct: 225 LQFIRTFKAEIPVRNQGRRSVGGLYYLSYLDANMLLGRA-AAGGIFVFTRAQPL 277


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