BLASTX nr result

ID: Cimicifuga21_contig00006247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006247
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74781.1| hypothetical protein VITISV_025062 [Vitis vinifera]   126   7e-27
ref|XP_002283255.1| PREDICTED: RING finger protein 126 [Vitis vi...   124   3e-26
gb|ACJ83283.1| unknown [Medicago truncatula] gi|217072378|gb|ACJ...   108   1e-21
ref|NP_001237666.1| uncharacterized protein LOC100527548 [Glycin...   105   1e-20
ref|XP_003536519.1| PREDICTED: RING finger protein 43-like [Glyc...   105   2e-20

>emb|CAN74781.1| hypothetical protein VITISV_025062 [Vitis vinifera]
          Length = 164

 Score =  126 bits (316), Expect = 7e-27
 Identities = 71/160 (44%), Positives = 98/160 (61%), Gaps = 4/160 (2%)
 Frame = -2

Query: 655 MAGMLPGVELARRRRTXXXXXXXXXXQLDSREPSLHHQRLEASSS--MNETALMARRRLE 482
           MAG LPGV +  RR +           L  REP    +RL+ S++  M ETALMAR+RL+
Sbjct: 1   MAGTLPGVGVGSRRMSHHRHRQDDP--LVFREPPPLRERLQHSTTVTMGETALMARQRLD 58

Query: 481 EKLRSFSAPSRWSKKHSNKGEESFNHAPPVKETRTSTTIQGKQ-SLQLDR-KNSQREVCS 308
            KL  + A SR SK+ +N   ES +     + + T + I G+   LQL+    S  E+CS
Sbjct: 59  RKLAHYRASSRSSKQGANGSRESNHKERTKRNSSTGSXILGRPWKLQLNTGSKSNGEMCS 118

Query: 307 ICLENFQAQEQVMNLPCCHKYHSNCLLPWLSTHSHCPYCR 188
           +CLE+F+ ++Q+M L C HKYHSNCL+PWL++H HCP CR
Sbjct: 119 VCLEDFEGEQQMMELSCSHKYHSNCLMPWLASHPHCPTCR 158


>ref|XP_002283255.1| PREDICTED: RING finger protein 126 [Vitis vinifera]
          Length = 164

 Score =  124 bits (310), Expect = 3e-26
 Identities = 70/160 (43%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
 Frame = -2

Query: 655 MAGMLPGVELARRRRTXXXXXXXXXXQLDSREPSLHHQRLEASSS--MNETALMARRRLE 482
           MAG LPGV +  RR +           L  REP    +RL+ S++  M ETALMAR+RL+
Sbjct: 1   MAGTLPGVGVGSRRMSHHRHRQDDP--LVFREPPPLRERLQHSTTVTMGETALMARQRLD 58

Query: 481 EKLRSFSAPSRWSKKHSNKGEESFNHAPPVKETRTSTTIQGKQ-SLQLDR-KNSQREVCS 308
            KL  + A SR SK+ +N   ES +     + +   + I G+   LQL+    S  E+CS
Sbjct: 59  RKLAHYRASSRSSKQGANGSRESNHKERTKRNSSIGSKILGRPWKLQLNTGSKSNGEMCS 118

Query: 307 ICLENFQAQEQVMNLPCCHKYHSNCLLPWLSTHSHCPYCR 188
           +CLE+F+ ++Q+M L C HKYHSNCL+PWL++H HCP CR
Sbjct: 119 VCLEDFEGEQQMMELSCSHKYHSNCLMPWLASHPHCPTCR 158


>gb|ACJ83283.1| unknown [Medicago truncatula] gi|217072378|gb|ACJ84549.1| unknown
           [Medicago truncatula] gi|388521239|gb|AFK48681.1|
           unknown [Medicago truncatula]
          Length = 161

 Score =  108 bits (271), Expect = 1e-21
 Identities = 61/160 (38%), Positives = 91/160 (56%), Gaps = 3/160 (1%)
 Frame = -2

Query: 655 MAGMLPGVELARRRRTXXXXXXXXXXQL--DSR-EPSLHHQRLEASSSMNETALMARRRL 485
           MAG LPGV L+ R+R+              DS  + SL       +++++ETA  A++RL
Sbjct: 1   MAGRLPGVGLSPRKRSEHYHNRHEHYATYRDSYLKESLDAPWTSMTTTLDETAFKAKQRL 60

Query: 484 EEKLRSFSAPSRWSKKHSNKGEESFNHAPPVKETRTSTTIQGKQSLQLDRKNSQREVCSI 305
           ++KL  F + SR S+ +  K  + F         +    ++    L+ ++   +R++C++
Sbjct: 61  QKKLGHFFSSSRSSEHNPKKEGKEFQKKDAGLGRKL---LESSWLLRGNKFKKERKICAV 117

Query: 304 CLENFQAQEQVMNLPCCHKYHSNCLLPWLSTHSHCPYCRT 185
           CLE+F   E+VMNL C HKYHS CLLPWL TH HCPYCRT
Sbjct: 118 CLEDFLQDEEVMNLSCSHKYHSACLLPWLETHPHCPYCRT 157


>ref|NP_001237666.1| uncharacterized protein LOC100527548 [Glycine max]
           gi|255632588|gb|ACU16644.1| unknown [Glycine max]
          Length = 166

 Score =  105 bits (262), Expect = 1e-20
 Identities = 61/162 (37%), Positives = 86/162 (53%), Gaps = 5/162 (3%)
 Frame = -2

Query: 655 MAGMLPGVELARRRRTXXXXXXXXXXQLDSREP-SLHHQRLEAS----SSMNETALMARR 491
           MAG LPGV L  R+RT              R+   L    LE      + ++ETAL AR+
Sbjct: 1   MAGRLPGVGLLARKRTEQNHRYEHQHHATCRQSYHLGESSLEPPWIPLTVLDETALKARQ 60

Query: 490 RLEEKLRSFSAPSRWSKKHSNKGEESFNHAPPVKETRTSTTIQGKQSLQLDRKNSQREVC 311
           RL +KL  F +  R S+    +G+ + +             ++    L+ ++    R+VC
Sbjct: 61  RLHKKLGHFFSSYRSSENPRKEGKVNQSSYEKKDGGIGRKLLESSWLLRGNKFKKDRKVC 120

Query: 310 SICLENFQAQEQVMNLPCCHKYHSNCLLPWLSTHSHCPYCRT 185
           ++CLE+   ++QVMNL C HKYHS CLLPWL+ H HCPYCRT
Sbjct: 121 AVCLEDLGQEQQVMNLSCSHKYHSACLLPWLAAHPHCPYCRT 162


>ref|XP_003536519.1| PREDICTED: RING finger protein 43-like [Glycine max]
          Length = 173

 Score =  105 bits (261), Expect = 2e-20
 Identities = 62/168 (36%), Positives = 85/168 (50%), Gaps = 11/168 (6%)
 Frame = -2

Query: 655 MAGMLPGVELARRRRTXXXXXXXXXXQLDSREPSLHHQRLEASSS-----------MNET 509
           MAG LPGV L  R+RT                P+  H      SS           ++ET
Sbjct: 1   MAGRLPGVGLLARKRTEKNYRYEHQYL-----PTCRHSYYPRESSSFDPPWIPLTVLDET 55

Query: 508 ALMARRRLEEKLRSFSAPSRWSKKHSNKGEESFNHAPPVKETRTSTTIQGKQSLQLDRKN 329
           AL AR+RL +KL  F +  R S+    +G+ S N             ++    L+ ++  
Sbjct: 56  ALKARQRLHKKLEHFFSSYRSSENPRKEGKVSQNRYEKKDGGIGRKLLECSWLLRGNKLK 115

Query: 328 SQREVCSICLENFQAQEQVMNLPCCHKYHSNCLLPWLSTHSHCPYCRT 185
             R+VC++CLE+   ++QVMNL C HKYHS CLL WL++H HCPYCRT
Sbjct: 116 KDRKVCAVCLEDLGLEQQVMNLSCSHKYHSACLLRWLASHPHCPYCRT 163


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