BLASTX nr result

ID: Cimicifuga21_contig00006241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006241
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003577030.1| PREDICTED: high affinity cationic amino acid...   216   2e-54
ref|XP_002316491.1| cationic amino acid transporter [Populus tri...   216   2e-54
gb|ABA96501.1| Amino acid permease family protein, expressed [Or...   214   6e-54
gb|EEE52800.1| hypothetical protein OsJ_35284 [Oryza sativa Japo...   214   6e-54
gb|EEC68890.1| hypothetical protein OsI_37534 [Oryza sativa Indi...   214   6e-54

>ref|XP_003577030.1| PREDICTED: high affinity cationic amino acid transporter 1-like
           [Brachypodium distachyon]
          Length = 607

 Score =  216 bits (550), Expect = 2e-54
 Identities = 103/131 (78%), Positives = 116/131 (88%)
 Frame = -2

Query: 395 RGDSKNFTHPADPKKPSGFSPFGVSGVFNGAATVYLSYIGYDAVSTMAEEVKNPKKDIPI 216
           RGD++N T P+DP  P GF P GV GVF+GAA VYLSYIGYDAVSTMAEEV+ P +DIPI
Sbjct: 247 RGDARNLTRPSDPAHPGGFFPNGVGGVFSGAAMVYLSYIGYDAVSTMAEEVEKPARDIPI 306

Query: 215 GVSGSVVLVTIIYCSMAASMSMLVPYDAIDTEAPFSSAFRGSDGWGWVSNVIGGGASFGI 36
           GVSGSVV+VT++YC MAASMSML+PYDAIDTEAPFS AFRGS+GWGWVSNVIG GAS GI
Sbjct: 307 GVSGSVVIVTVLYCLMAASMSMLLPYDAIDTEAPFSGAFRGSEGWGWVSNVIGAGASLGI 366

Query: 35  LTSLLVSMLGQ 3
           LTSL+V+MLGQ
Sbjct: 367 LTSLMVAMLGQ 377


>ref|XP_002316491.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222865531|gb|EEF02662.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 600

 Score =  216 bits (550), Expect = 2e-54
 Identities = 106/132 (80%), Positives = 117/132 (88%), Gaps = 1/132 (0%)
 Frame = -2

Query: 395 RGDSKNFTHPADPKKPSGFSPFGVSGVFNGAATVYLSYIGYDAVSTMAEEVKNPKKDIPI 216
           +GD KNFT PADPK PSGF PFG  GVFNGAA VYLSYIGYDAVST+AEEV NP KDIPI
Sbjct: 245 KGDWKNFTEPADPKNPSGFFPFGAPGVFNGAAMVYLSYIGYDAVSTLAEEVHNPVKDIPI 304

Query: 215 GVSGSVVLVTIIYCSMAASMSMLVPYDAIDTEAPFSSAFRG-SDGWGWVSNVIGGGASFG 39
           GVSGSV++VT++YC M+ASMSML+PYD ID +APFS+AFRG SDGW WVSNVIG GASFG
Sbjct: 305 GVSGSVIIVTVLYCLMSASMSMLLPYDMIDADAPFSAAFRGKSDGWKWVSNVIGIGASFG 364

Query: 38  ILTSLLVSMLGQ 3
           ILTSLLV+MLGQ
Sbjct: 365 ILTSLLVAMLGQ 376


>gb|ABA96501.1| Amino acid permease family protein, expressed [Oryza sativa
           Japonica Group]
          Length = 535

 Score =  214 bits (545), Expect = 6e-54
 Identities = 104/132 (78%), Positives = 116/132 (87%), Gaps = 1/132 (0%)
 Frame = -2

Query: 395 RGDSKNFTHPADPK-KPSGFSPFGVSGVFNGAATVYLSYIGYDAVSTMAEEVKNPKKDIP 219
           RGD++N T PADP+  P GF P G +GVFNGAA VYLSYIGYDAVSTMAEEV+ P +DIP
Sbjct: 182 RGDTRNLTRPADPEHNPGGFFPHGAAGVFNGAAMVYLSYIGYDAVSTMAEEVERPSRDIP 241

Query: 218 IGVSGSVVLVTIIYCSMAASMSMLVPYDAIDTEAPFSSAFRGSDGWGWVSNVIGGGASFG 39
           IGVSGSVVLVT++YC MAASMSML+PYDAIDTEAPFS AF+GS GWGWVSNVIG GAS G
Sbjct: 242 IGVSGSVVLVTLLYCLMAASMSMLLPYDAIDTEAPFSGAFKGSSGWGWVSNVIGAGASLG 301

Query: 38  ILTSLLVSMLGQ 3
           ILTSL+V+MLGQ
Sbjct: 302 ILTSLMVAMLGQ 313


>gb|EEE52800.1| hypothetical protein OsJ_35284 [Oryza sativa Japonica Group]
          Length = 350

 Score =  214 bits (545), Expect = 6e-54
 Identities = 104/132 (78%), Positives = 116/132 (87%), Gaps = 1/132 (0%)
 Frame = -2

Query: 395 RGDSKNFTHPADPK-KPSGFSPFGVSGVFNGAATVYLSYIGYDAVSTMAEEVKNPKKDIP 219
           RGD++N T PADP+  P GF P G +GVFNGAA VYLSYIGYDAVSTMAEEV+ P +DIP
Sbjct: 21  RGDTRNLTRPADPEHNPGGFFPHGAAGVFNGAAMVYLSYIGYDAVSTMAEEVERPSRDIP 80

Query: 218 IGVSGSVVLVTIIYCSMAASMSMLVPYDAIDTEAPFSSAFRGSDGWGWVSNVIGGGASFG 39
           IGVSGSVVLVT++YC MAASMSML+PYDAIDTEAPFS AF+GS GWGWVSNVIG GAS G
Sbjct: 81  IGVSGSVVLVTLLYCLMAASMSMLLPYDAIDTEAPFSGAFKGSSGWGWVSNVIGAGASLG 140

Query: 38  ILTSLLVSMLGQ 3
           ILTSL+V+MLGQ
Sbjct: 141 ILTSLMVAMLGQ 152


>gb|EEC68890.1| hypothetical protein OsI_37534 [Oryza sativa Indica Group]
          Length = 600

 Score =  214 bits (545), Expect = 6e-54
 Identities = 104/132 (78%), Positives = 116/132 (87%), Gaps = 1/132 (0%)
 Frame = -2

Query: 395 RGDSKNFTHPADPK-KPSGFSPFGVSGVFNGAATVYLSYIGYDAVSTMAEEVKNPKKDIP 219
           RGD++N T PADP+  P GF P G +GVFNGAA VYLSYIGYDAVSTMAEEV+ P +DIP
Sbjct: 247 RGDTRNLTRPADPEHNPGGFFPHGAAGVFNGAAMVYLSYIGYDAVSTMAEEVERPSRDIP 306

Query: 218 IGVSGSVVLVTIIYCSMAASMSMLVPYDAIDTEAPFSSAFRGSDGWGWVSNVIGGGASFG 39
           IGVSGSVVLVT++YC MAASMSML+PYDAIDTEAPFS AF+GS GWGWVSNVIG GAS G
Sbjct: 307 IGVSGSVVLVTLLYCLMAASMSMLLPYDAIDTEAPFSGAFKGSSGWGWVSNVIGAGASLG 366

Query: 38  ILTSLLVSMLGQ 3
           ILTSL+V+MLGQ
Sbjct: 367 ILTSLMVAMLGQ 378


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