BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006237
         (2312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15506.3| unnamed protein product [Vitis vinifera]              667   0.0  
ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vi...   660   0.0  
ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis ...   642   0.0  
gb|ABR18412.1| unknown [Picea sitchensis]                             640   0.0  
ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus ...   640   0.0  

>emb|CBI15506.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score =  667 bits (1722), Expect = 0.0
 Identities = 351/653 (53%), Positives = 436/653 (66%), Gaps = 23/653 (3%)
 Frame = -2

Query: 2038 QPISLGGCTELDELNTQKLETYMHEAGLYESPDESALKKQVLVSLDVILKEWVKRVAHNK 1859
            +PISLGG  ELD   TQ+LE ++  AGLYES +E+  +++VL  LD I+K WVK ++  K
Sbjct: 20   EPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVKIWVKAISRAK 79

Query: 1858 GLD---VLDANAVIFPFGSYSLGVSGPGTDMDVLCVGPQYATREEDFFQVFYGMLLEMPQ 1688
            GL+   V +ANA IF FGSY LGV GPG D+D LCVGP++ATREEDFF   + ML EMP+
Sbjct: 80   GLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPE 139

Query: 1687 VTELNSVPAAHVPLIKLKFCGISIDLLYARLSLWVIPNDLDISNDSFLRNIDEQSVRSLN 1508
            VTEL+ VP AHVP+++ KF G+SIDLLYA+LSLWVIP DLD+S DS L+N DEQ+VRSLN
Sbjct: 140  VTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVRSLN 199

Query: 1507 GVRVTNRILGLVPHVSNFRTALRCIRFWAKRRGVYSNVVGFLGGINWALLLALICKLYPN 1328
            G RVT++IL LVP++ NFRT LR +RFWAKRRGVYSNV GFLGGINWALL+A IC+LYPN
Sbjct: 200  GCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 259

Query: 1327 GLPSVLVARFFRIYTQWRWPAPIKLCPIEAGSLGLSVWDPRRNPRDRLHHMPIITPAYPC 1148
             LPS+LV+RFFR+YTQWRWP P+ LC IE G+LGL VWDPR+ P+DR H MPIITPAYPC
Sbjct: 260  ALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPC 319

Query: 1147 MNSSYNVSPSTLHVMKEEFQRGNEICDAMAANTADWNVLFQPFSFFEAYRNYLQIDVSAK 968
            MNSSYNVS STL +M EEF+RGNEI + M AN ADW  L +P+ FFEAY+NYLQI+++A+
Sbjct: 320  MNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQIEIAAE 379

Query: 967  TEEDLRKWKGWVESRLRHLTFSIERDTGCLLQCHPNPAEFRDKCRPFHCCYFMALRRNKE 788
              +DLRKWKGWVESRLR LT  IER T  +LQCHP+P +F DK RPFHCCYFM L+R + 
Sbjct: 380  NADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPFHCCYFMGLQRKQG 439

Query: 787  VHAHGGGEFHLTAATEEFKHKVGLYSLRKAGMKIQVSHTSRRDIXXXXXXXXXXXXXVAK 608
            V A  G +F +    +EFKH VG+Y+L K GM+I V H  RR+I             V K
Sbjct: 440  VPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGYGYKYVGK 499

Query: 607  VAWVGRPVLKANTSTSAQLDKKFESTVEVAQTVEGRKRKQNDNDGESSPKKAKCLTEVAS 428
                               ++K + +V  +  +   K   +     SS +  K   E   
Sbjct: 500  -----------------DKERKIDGSVRCSHPI---KTLSSSGGSPSSTEAEKIAIEKIM 539

Query: 427  SNGGV----FGGSVERILPMVGHNPGSRKVSDIESGNKGAQVDSVSAKVA---------- 290
            S   V    F G ++ +   V +     +V D     KG+  +S  A VA          
Sbjct: 540  SGPYVSHQAFPGELDELEDDVEY---KNQVKDFTGSTKGSSAESSKANVAEEPLTTTSGT 596

Query: 289  ------TGKGGLDELEPLELMTPYSHILPPSTYATQRKPIIRLSSTSLVKACG 149
                  +  GGL+ELEP ELM P S+   PS+   Q+KPIIRLS TSL KA G
Sbjct: 597  VPCTILSPNGGLEELEPAELMPPLSYGNRPSS-TEQKKPIIRLSFTSLAKATG 648


>ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 757

 Score =  660 bits (1703), Expect = 0.0
 Identities = 326/549 (59%), Positives = 402/549 (73%), Gaps = 3/549 (0%)
 Frame = -2

Query: 2038 QPISLGGCTELDELNTQKLETYMHEAGLYESPDESALKKQVLVSLDVILKEWVKRVAHNK 1859
            +PISLGG  ELD   TQ+LE ++  AGLYES +E+  +++VL  LD I+K WVK ++  K
Sbjct: 20   EPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVKIWVKAISRAK 79

Query: 1858 GLD---VLDANAVIFPFGSYSLGVSGPGTDMDVLCVGPQYATREEDFFQVFYGMLLEMPQ 1688
            GL+   V +ANA IF FGSY LGV GPG D+D LCVGP++ATREEDFF   + ML EMP+
Sbjct: 80   GLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPE 139

Query: 1687 VTELNSVPAAHVPLIKLKFCGISIDLLYARLSLWVIPNDLDISNDSFLRNIDEQSVRSLN 1508
            VTEL+ VP AHVP+++ KF G+SIDLLYA+LSLWVIP DLD+S DS L+N DEQ+VRSLN
Sbjct: 140  VTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVRSLN 199

Query: 1507 GVRVTNRILGLVPHVSNFRTALRCIRFWAKRRGVYSNVVGFLGGINWALLLALICKLYPN 1328
            G RVT++IL LVP++ NFRT LR +RFWAKRRGVYSNV GFLGGINWALL+A IC+LYPN
Sbjct: 200  GCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 259

Query: 1327 GLPSVLVARFFRIYTQWRWPAPIKLCPIEAGSLGLSVWDPRRNPRDRLHHMPIITPAYPC 1148
             LPS+LV+RFFR+YTQWRWP P+ LC IE G+LGL VWDPR+ P+DR H MPIITPAYPC
Sbjct: 260  ALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPC 319

Query: 1147 MNSSYNVSPSTLHVMKEEFQRGNEICDAMAANTADWNVLFQPFSFFEAYRNYLQIDVSAK 968
            MNSSYNVS STL +M EEF+RGNEI + M AN ADW  L +P+ FFEAY+NYLQI+++A+
Sbjct: 320  MNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQIEIAAE 379

Query: 967  TEEDLRKWKGWVESRLRHLTFSIERDTGCLLQCHPNPAEFRDKCRPFHCCYFMALRRNKE 788
              +DLRKWKGWVESRLR LT  IER T  +LQCHP+P +F DK RPFHCCYFM L+R + 
Sbjct: 380  NADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPFHCCYFMGLQRKQG 439

Query: 787  VHAHGGGEFHLTAATEEFKHKVGLYSLRKAGMKIQVSHTSRRDIXXXXXXXXXXXXXVAK 608
            V A  G +F +    +EFKH VG+Y+L K GM+I V H  RR+I               K
Sbjct: 440  VPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRPSRPTK 499

Query: 607  VAWVGRPVLKANTSTSAQLDKKFESTVEVAQTVEGRKRKQNDNDGESSPKKAKCLTEVAS 428
            VA   R VL+ N ST A L+   +S          +KRK+ D + E++ + AKCL   AS
Sbjct: 500  VASERRRVLEPNVSTQAVLEGAEDS----------KKRKREDENVETNSRNAKCLVAAAS 549

Query: 427  SNGGVFGGS 401
            S+  V   +
Sbjct: 550  SSHEVLSSN 558


>ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
            gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A)
            polymerase-like [Cucumis sativus]
          Length = 748

 Score =  642 bits (1657), Expect = 0.0
 Identities = 312/534 (58%), Positives = 394/534 (73%), Gaps = 3/534 (0%)
 Frame = -2

Query: 2035 PISLGGCTELDELNTQKLETYMHEAGLYESPDESALKKQVLVSLDVILKEWVKRVAHNKG 1856
            PISL G TE D L T++LE Y+ +AGLYES +++  +++VL  LD I+K WVK ++  KG
Sbjct: 21   PISLSGPTEYDVLKTRELEKYLQDAGLYESQEDAVNREEVLGRLDQIVKIWVKAISRAKG 80

Query: 1855 LD---VLDANAVIFPFGSYSLGVSGPGTDMDVLCVGPQYATREEDFFQVFYGMLLEMPQV 1685
            L+   V +ANA IF FGSY LGV GPG D+D LCVGP++ATREEDFF   + ML EMP+V
Sbjct: 81   LNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEV 140

Query: 1684 TELNSVPAAHVPLIKLKFCGISIDLLYARLSLWVIPNDLDISNDSFLRNIDEQSVRSLNG 1505
            +EL+ VP AHVP+++ K  G+SIDLLYA+LSLWVIP DLDIS DS L+N DEQ+VRSLNG
Sbjct: 141  SELHPVPDAHVPVMRFKLSGVSIDLLYAKLSLWVIPEDLDISQDSILQNTDEQTVRSLNG 200

Query: 1504 VRVTNRILGLVPHVSNFRTALRCIRFWAKRRGVYSNVVGFLGGINWALLLALICKLYPNG 1325
             RVT+RIL LVP++ +FRT LRC+RFWAKRRGVYSNV GFLGGINWALL+A IC+LYPN 
Sbjct: 201  CRVTDRILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPNA 260

Query: 1324 LPSVLVARFFRIYTQWRWPAPIKLCPIEAGSLGLSVWDPRRNPRDRLHHMPIITPAYPCM 1145
            LP++LV+RFFR++TQWRWP P+ LC  E GSLGL VWDPRRNP+DR H MPIITPAYPCM
Sbjct: 261  LPNMLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPCM 320

Query: 1144 NSSYNVSPSTLHVMKEEFQRGNEICDAMAANTADWNVLFQPFSFFEAYRNYLQIDVSAKT 965
            NSSYNVS STL +M EEF+RG++IC+ M  N +DW+ LF+P+ FFEAY+NYLQID++A+ 
Sbjct: 321  NSSYNVSASTLRIMTEEFRRGHDICEVMEENKSDWDTLFEPYPFFEAYKNYLQIDITAEN 380

Query: 964  EEDLRKWKGWVESRLRHLTFSIERDTGCLLQCHPNPAEFRDKCRPFHCCYFMALRRNKEV 785
            ++D+R WKGWVESRLR LT  IER T  +LQCHP P +F DK RPFH CYFM L+R +  
Sbjct: 381  DDDIRIWKGWVESRLRQLTLKIERHTYNMLQCHPYPGDFSDKSRPFHHCYFMGLQRKQGG 440

Query: 784  HAHGGGEFHLTAATEEFKHKVGLYSLRKAGMKIQVSHTSRRDIXXXXXXXXXXXXXVAKV 605
             A GG +F +    +EFKH V +Y+ RK GM+I VSH  RR I              +K+
Sbjct: 441  PASGGEQFDIRLTVDEFKHSVNVYTQRKRGMEIYVSHVKRRSIPNFVFPGGVRPSRASKL 500

Query: 604  AWVGRPVLKANTSTSAQLDKKFESTVEVAQTVEGRKRKQNDNDGESSPKKAKCL 443
             W  R   +   S S Q+D   E+T E     + RKR + D++  ++ +  +CL
Sbjct: 501  TWDIRRSSELKASDSTQVDSPSEAT-ESLDGDDRRKRIRIDDNANTNLRNGECL 553


>gb|ABR18412.1| unknown [Picea sitchensis]
          Length = 712

 Score =  640 bits (1652), Expect = 0.0
 Identities = 345/688 (50%), Positives = 441/688 (64%), Gaps = 64/688 (9%)
 Frame = -2

Query: 2038 QPISLGGCTELDELNTQKLETYMHEAGLYESPDESALKKQVLVSLDVILKEWVKRVAHNK 1859
            +PISLGG +E D + T +LE ++  AGLYES +E+  +++VL  LD I+K WV++++ NK
Sbjct: 20   EPISLGGPSEFDYIKTAELEKFLVSAGLYESQEEAVRREEVLGRLDQIVKVWVRKISRNK 79

Query: 1858 GLD---VLDANAVIFPFGSYSLGVSGPGTDMDVLCVGPQYATREEDFFQVFYGMLLEMPQ 1688
            G     V +ANA IF FGSY LGV GPG D+D LCVGP++ATREEDFF   Y ML +MP+
Sbjct: 80   GFGEQVVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFIELYEMLADMPE 139

Query: 1687 VTELNSVPAAHVPLIKLKFCGISIDLLYARLSLWVIPNDLDISNDSFLRNIDEQSVRSLN 1508
            VTEL+ VP AHVP++K KF GISIDLLYA+LSLWVIP DLDIS DS LRN DEQ+VRSLN
Sbjct: 140  VTELHPVPDAHVPVMKFKFNGISIDLLYAKLSLWVIPEDLDISQDSILRNADEQTVRSLN 199

Query: 1507 GVRVTNRILGLVPHVSNFRTALRCIRFWAKRRGVYSNVVGFLGGINWALLLALICKLYPN 1328
            G RVT++IL LVP++ NFRT LRC++ WAKRRGVYSNV GFLGG+NWALL+A IC+LYPN
Sbjct: 200  GCRVTDQILRLVPNIQNFRTTLRCMKLWAKRRGVYSNVAGFLGGVNWALLVARICQLYPN 259

Query: 1327 GLPSVLVARFFRIYTQWRWPAPIKLCPIEAGSLGLSVWDPRRNPRDRLHHMPIITPAYPC 1148
             LPS+LV RFFR+YTQWRWP P+ LC IE G LGL VWDPR+NPRDRLH MPIITPAYPC
Sbjct: 260  ALPSMLVCRFFRVYTQWRWPNPVMLCAIEEGPLGLPVWDPRKNPRDRLHQMPIITPAYPC 319

Query: 1147 MNSSYNVSPSTLHVMKEEFQRGNEICDAMAANTADWNVLFQPFSFFEAYRNYLQIDVSAK 968
            MNSSYNVS STL VM EEFQR N+IC+ +  N   WN+LF+ + FFEAY+NYL+ID+SA+
Sbjct: 320  MNSSYNVSSSTLRVMTEEFQRSNQICEELELNKVCWNILFETYPFFEAYKNYLEIDISAE 379

Query: 967  TEEDLRKWKGWVESRLRHLTFSIERDTGCLLQCHPNPAEFRDKCRPFHCCYFMALRRNKE 788
              +DLRKWKGW ESRLR LT  IER T  +LQCHP+P +F D  RP+HCC+FM L+R + 
Sbjct: 380  GADDLRKWKGWTESRLRLLTLKIERQTFGMLQCHPHPDDFSDPQRPYHCCFFMGLQRKQG 439

Query: 787  VHAHGGGEFHLTAATEEFKHKVGLYSLRKAGMKIQVSHTSRRDIXXXXXXXXXXXXXVAK 608
            +    G +F +    +EF+H V +Y+L K GM+I VSH  RR+I               K
Sbjct: 440  MPIQEGEQFDIRVTVDEFRHSVKMYTLWKQGMEINVSHIRRRNIPLFVFPGGVRPPRTTK 499

Query: 607  ----------VAWVGRPVLK--ANTSTSAQLDKKFESTVEVAQTVEGRKRKQND------ 482
                      V   G PVL   A + T    D+    + EV   V+ ++ + N+      
Sbjct: 500  MLGTAGRPNAVPSTGVPVLSHTAKSDTGLPDDELDGVSGEVTSMVKRKRDRANEELVASK 559

Query: 481  -------------NDGE-------------SSPKKAKCLTEVASSNGGVFGGSVERILPM 380
                         ++ E             S   +   +T++ S  G  FG  VE +  +
Sbjct: 560  RPSVLPLANGTKTSNSERGIAPAEPIAIQASQTAEEVAITKITSGQGDGFGSPVEELDEL 619

Query: 379  VGHNPGSRKVSDIESGNKGAQVDSVSAKVATGK----------------GGLDELEPLEL 248
              +       + +E   K   VDSVS+    G+                G ++ELEP+EL
Sbjct: 620  DEYTTFVPMKAILEEQQKSI-VDSVSSCPRNGQPKELALSGPHLDKYENGSVEELEPVEL 678

Query: 247  MTPYSHILPPSTYA-TQRKPIIRLSSTS 167
              P S I+  ++ A TQRKP+IRL+  S
Sbjct: 679  --PGSGIIVSNSKAETQRKPLIRLNLAS 704


>ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
            gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha,
            putative [Ricinus communis]
          Length = 770

 Score =  640 bits (1650), Expect = 0.0
 Identities = 317/532 (59%), Positives = 390/532 (73%), Gaps = 3/532 (0%)
 Frame = -2

Query: 2035 PISLGGCTELDELNTQKLETYMHEAGLYESPDESALKKQVLVSLDVILKEWVKRVAHNKG 1856
            PISLGG TE D + +++LE ++ + GLYES +ES  +++VL  LD I+K WVK ++  KG
Sbjct: 23   PISLGGPTEYDLIKSRELEKFLQDMGLYESREESVSREEVLGRLDQIVKHWVKVISRAKG 82

Query: 1855 LD---VLDANAVIFPFGSYSLGVSGPGTDMDVLCVGPQYATREEDFFQVFYGMLLEMPQV 1685
            L+   V +ANA IF FGSY LGV GPG D+D LCVGP++ATREEDFF   + ML EMP+V
Sbjct: 83   LNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHRMLSEMPEV 142

Query: 1684 TELNSVPAAHVPLIKLKFCGISIDLLYARLSLWVIPNDLDISNDSFLRNIDEQSVRSLNG 1505
            TEL+ VP AHVP++K KF G+SIDLLYA+LSLWVIP DLDIS DS L+N DEQ+VRSLNG
Sbjct: 143  TELHPVPDAHVPVLKFKFKGVSIDLLYAKLSLWVIPEDLDISQDSILQNADEQTVRSLNG 202

Query: 1504 VRVTNRILGLVPHVSNFRTALRCIRFWAKRRGVYSNVVGFLGGINWALLLALICKLYPNG 1325
             RVT++IL LVP++ NFRT LRC+RFWAKRRGVYSNV GFLGGINWALL+A IC+L+PN 
Sbjct: 203  CRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLFPNA 262

Query: 1324 LPSVLVARFFRIYTQWRWPAPIKLCPIEAGSLGLSVWDPRRNPRDRLHHMPIITPAYPCM 1145
            LP++LV+RFFR+YTQWRWP P+ LC IE GSLGL VWDPRRNP+DR H MPIITPAYP M
Sbjct: 263  LPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPSM 322

Query: 1144 NSSYNVSPSTLHVMKEEFQRGNEICDAMAANTADWNVLFQPFSFFEAYRNYLQIDVSAKT 965
            NSSYNVS STL +M EEFQRGNEIC+AM A+ ADWN LF+ FSFF+AY+NYLQID+ A+ 
Sbjct: 323  NSSYNVSASTLRIMSEEFQRGNEICEAMEASKADWNTLFESFSFFDAYKNYLQIDIGAEN 382

Query: 964  EEDLRKWKGWVESRLRHLTFSIERDTGCLLQCHPNPAEFRDKCRPFHCCYFMALRRNKEV 785
            E+DLRKWKGWVESRLR LT  IER T  +LQCHP+P EF DK RP HC YFM L+R + V
Sbjct: 383  EDDLRKWKGWVESRLRQLTLKIERHTFNMLQCHPHPGEFTDKSRPLHCSYFMGLQRKQGV 442

Query: 784  HAHGGGEFHLTAATEEFKHKVGLYSLRKAGMKIQVSHTSRRDIXXXXXXXXXXXXXVAKV 605
             A+ G +F +    EEFK  V +Y+  K GM+I V+H  RR+I              +K 
Sbjct: 443  PANEGEQFDIRITVEEFKISVNMYTSWKPGMEIHVTHVKRRNIPSFVFPGGIRPSRPSKT 502

Query: 604  AWVGRPVLKANTSTSAQLDKKFESTVEVAQTVEGRKRKQNDNDGESSPKKAK 449
             W          S  +  +K  E       + +  KRK+ D++  ++ K AK
Sbjct: 503  TW---------DSKRSSAEKSGEGKGVSDGSDDKGKRKRIDDNVANATKIAK 545