BLASTX nr result

ID: Cimicifuga21_contig00006228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006228
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267083.1| PREDICTED: UPF0414 transmembrane protein C20...   192   8e-47
gb|ABD66514.1| unknown [Gymnadenia conopsea]                          183   4e-44
ref|XP_002530588.1| conserved hypothetical protein [Ricinus comm...   182   5e-44
ref|XP_002325237.1| predicted protein [Populus trichocarpa] gi|2...   182   6e-44
ref|NP_194714.1| uncharacterized protein [Arabidopsis thaliana] ...   182   6e-44

>ref|XP_002267083.1| PREDICTED: UPF0414 transmembrane protein C20orf30 homolog [Vitis
           vinifera] gi|147825386|emb|CAN75495.1| hypothetical
           protein VITISV_030526 [Vitis vinifera]
           gi|297735425|emb|CBI17865.3| unnamed protein product
           [Vitis vinifera]
          Length = 103

 Score =  192 bits (487), Expect = 8e-47
 Identities = 89/103 (86%), Positives = 98/103 (95%)
 Frame = -3

Query: 565 MAYVDHAFSITDEDIMMEPAYIVHNRPPIKEIALSIALLVFGTLGIVLGTFMAYNRIGGD 386
           MAYVDHAFSI+DEDIMME +YIVHNRPPIKEIAL++ALLVFGTLGI+LG  M YNR+GGD
Sbjct: 1   MAYVDHAFSISDEDIMMETSYIVHNRPPIKEIALAVALLVFGTLGIILGILMVYNRVGGD 60

Query: 385 RAHGLFFAALGAILFIPGFYYTRIAYYAYKGYQGFSFANIPPM 257
           RAHGLFFA LGAILFIPGFYYTRIAYYAYKGY+GFSF+NIPP+
Sbjct: 61  RAHGLFFAILGAILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103


>gb|ABD66514.1| unknown [Gymnadenia conopsea]
          Length = 103

 Score =  183 bits (464), Expect = 4e-44
 Identities = 84/101 (83%), Positives = 93/101 (92%)
 Frame = -3

Query: 565 MAYVDHAFSITDEDIMMEPAYIVHNRPPIKEIALSIALLVFGTLGIVLGTFMAYNRIGGD 386
           MAYVDHAFSI+DEDIMME +Y+VHNRPP+KEIAL++ALLVFG LGIVLG  M YNR GGD
Sbjct: 1   MAYVDHAFSISDEDIMMESSYVVHNRPPVKEIALAVALLVFGVLGIVLGIVMTYNRAGGD 60

Query: 385 RAHGLFFAALGAILFIPGFYYTRIAYYAYKGYQGFSFANIP 263
           RAHG+FFA LGA+LF+PGFYYTRIAYYAYKGY GFSFANIP
Sbjct: 61  RAHGIFFAILGAVLFLPGFYYTRIAYYAYKGYTGFSFANIP 101


>ref|XP_002530588.1| conserved hypothetical protein [Ricinus communis]
           gi|223529887|gb|EEF31818.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 103

 Score =  182 bits (463), Expect = 5e-44
 Identities = 84/103 (81%), Positives = 95/103 (92%)
 Frame = -3

Query: 565 MAYVDHAFSITDEDIMMEPAYIVHNRPPIKEIALSIALLVFGTLGIVLGTFMAYNRIGGD 386
           MAYVDHAFSITD+D+M+E +Y+V+NRPPIKEIAL++ALLVFG  GIVLG FM  NRIGGD
Sbjct: 1   MAYVDHAFSITDDDLMLETSYVVNNRPPIKEIALAVALLVFGVTGIVLGIFMTVNRIGGD 60

Query: 385 RAHGLFFAALGAILFIPGFYYTRIAYYAYKGYQGFSFANIPPM 257
           RAHGLFFA LG +LFIPGFYYTRIAYYAYKGY+GFSFANIPP+
Sbjct: 61  RAHGLFFAILGVVLFIPGFYYTRIAYYAYKGYKGFSFANIPPV 103


>ref|XP_002325237.1| predicted protein [Populus trichocarpa] gi|222866671|gb|EEF03802.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score =  182 bits (462), Expect = 6e-44
 Identities = 82/103 (79%), Positives = 96/103 (93%)
 Frame = -3

Query: 565 MAYVDHAFSITDEDIMMEPAYIVHNRPPIKEIALSIALLVFGTLGIVLGTFMAYNRIGGD 386
           MAYVDHAFSITDED+M+E +Y V+N+PPIKEIAL++ALLVFG +GIVLGTFM YNR+GGD
Sbjct: 1   MAYVDHAFSITDEDLMVETSYTVNNKPPIKEIALAVALLVFGVVGIVLGTFMTYNRVGGD 60

Query: 385 RAHGLFFAALGAILFIPGFYYTRIAYYAYKGYQGFSFANIPPM 257
           R HGLFFA LG +LFIPGFYYTRIAY+AYKGY+GFSF+NIPP+
Sbjct: 61  RGHGLFFAILGVVLFIPGFYYTRIAYFAYKGYKGFSFSNIPPV 103


>ref|NP_194714.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4914409|emb|CAB43660.1| putative protein [Arabidopsis
           thaliana] gi|7269884|emb|CAB79743.1| putative protein
           [Arabidopsis thaliana] gi|88900368|gb|ABD57496.1|
           At4g29850 [Arabidopsis thaliana]
           gi|332660285|gb|AEE85685.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 103

 Score =  182 bits (462), Expect = 6e-44
 Identities = 83/103 (80%), Positives = 95/103 (92%)
 Frame = -3

Query: 565 MAYVDHAFSITDEDIMMEPAYIVHNRPPIKEIALSIALLVFGTLGIVLGTFMAYNRIGGD 386
           MAYVDHAFSITDEDIM+E +Y V+NRPP+KEIAL++ALLVFGTLGIV G FMAYNR+GGD
Sbjct: 1   MAYVDHAFSITDEDIMIETSYTVNNRPPVKEIALAVALLVFGTLGIVSGFFMAYNRVGGD 60

Query: 385 RAHGLFFAALGAILFIPGFYYTRIAYYAYKGYQGFSFANIPPM 257
           R HG+FF  LG +LFIPGFYYTRIAYYAYKGY+GFSF+NIPP+
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103


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