BLASTX nr result

ID: Cimicifuga21_contig00006224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006224
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN84027.1| hypothetical protein VITISV_044183 [Vitis vinifera]   212   9e-75
ref|XP_002267995.1| PREDICTED: ATP synthase subunit delta', mito...   212   6e-74
gb|ACS83604.1| ATP synthase delta subunit 3 [Gossypium hirsutum]      201   5e-72
ref|XP_003529025.1| PREDICTED: ATP synthase subunit delta', mito...   204   2e-71
ref|XP_002326840.1| predicted protein [Populus trichocarpa] gi|2...   204   2e-71

>emb|CAN84027.1| hypothetical protein VITISV_044183 [Vitis vinifera]
          Length = 206

 Score =  212 bits (539), Expect(2) = 9e-75
 Identities = 105/116 (90%), Positives = 113/116 (97%)
 Frame = -1

Query: 614 KEVDMVIIPATTGHMGVLPGHVATIAELKPGVLSVHEGNDVNKYFVSSGFAFIHANSFAD 435
           KEVDMVIIPATTG MGVLPGHVATIAELKPGV+SVHEGNDV KYF+SSGFA IHANSFAD
Sbjct: 91  KEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVTKYFISSGFAVIHANSFAD 150

Query: 434 IVAVEAVPLDQIDPSLVQKGLAEFTQKLSSASTDLEKAEAQIGVDLHSALNSALSG 267
           I+A+EAVP+DQIDPSLVQKGLA+FTQKLSSASTDLEKAEAQIGVD+HSALNSAL+G
Sbjct: 151 IIAIEAVPIDQIDPSLVQKGLADFTQKLSSASTDLEKAEAQIGVDVHSALNSALTG 206



 Score = 95.9 bits (237), Expect(2) = 9e-75
 Identities = 43/58 (74%), Positives = 49/58 (84%)
 Frame = -2

Query: 862 PFSTDLQSTPTTDSAFIEAWKKIIPNIEPPKTPLSFMQSRPPNPSTIPTKLTVNFVLP 689
           PFSTDL + P  DS FI+AWKKIIPNI+PP TPL+FMQ RP  PS+IP+KLTVNFVLP
Sbjct: 26  PFSTDLPAAPAEDSTFIDAWKKIIPNIDPPATPLTFMQPRPQTPSSIPSKLTVNFVLP 83


>ref|XP_002267995.1| PREDICTED: ATP synthase subunit delta', mitochondrial [Vitis
           vinifera] gi|297734660|emb|CBI16711.3| unnamed protein
           product [Vitis vinifera]
          Length = 206

 Score =  212 bits (539), Expect(2) = 6e-74
 Identities = 105/116 (90%), Positives = 113/116 (97%)
 Frame = -1

Query: 614 KEVDMVIIPATTGHMGVLPGHVATIAELKPGVLSVHEGNDVNKYFVSSGFAFIHANSFAD 435
           KEVDMVIIPATTG MGVLPGHVATIAELKPGV+SVHEGNDV KYF+SSGFA IHANSFAD
Sbjct: 91  KEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVTKYFISSGFAVIHANSFAD 150

Query: 434 IVAVEAVPLDQIDPSLVQKGLAEFTQKLSSASTDLEKAEAQIGVDLHSALNSALSG 267
           I+A+EAVP+DQIDPSLVQKGLA+FTQKLSSASTDLEKAEAQIGVD+HSALNSAL+G
Sbjct: 151 IIAIEAVPIDQIDPSLVQKGLADFTQKLSSASTDLEKAEAQIGVDVHSALNSALTG 206



 Score = 93.2 bits (230), Expect(2) = 6e-74
 Identities = 42/57 (73%), Positives = 48/57 (84%)
 Frame = -2

Query: 859 FSTDLQSTPTTDSAFIEAWKKIIPNIEPPKTPLSFMQSRPPNPSTIPTKLTVNFVLP 689
           FSTDL + P  DS FI+AWKKIIPNI+PP TPL+FMQ RP  PS+IP+KLTVNFVLP
Sbjct: 27  FSTDLPTAPAEDSTFIDAWKKIIPNIDPPATPLTFMQPRPQTPSSIPSKLTVNFVLP 83


>gb|ACS83604.1| ATP synthase delta subunit 3 [Gossypium hirsutum]
          Length = 201

 Score =  201 bits (511), Expect(2) = 5e-72
 Identities = 99/116 (85%), Positives = 111/116 (95%)
 Frame = -1

Query: 614 KEVDMVIIPATTGHMGVLPGHVATIAELKPGVLSVHEGNDVNKYFVSSGFAFIHANSFAD 435
           KEVDMVI+PATTG MGVLPGHVATIAELKPGVLSVHEG+++ KYFVSSGF FIHANSFAD
Sbjct: 86  KEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGSEMTKYFVSSGFVFIHANSFAD 145

Query: 434 IVAVEAVPLDQIDPSLVQKGLAEFTQKLSSASTDLEKAEAQIGVDLHSALNSALSG 267
           I+AVEAVPLD++D +LVQKGLAEFT KLSSA+TDLEKAEAQIG+D+HSALNSAL+G
Sbjct: 146 IIAVEAVPLDRLDVNLVQKGLAEFTSKLSSATTDLEKAEAQIGIDVHSALNSALTG 201



 Score = 97.4 bits (241), Expect(2) = 5e-72
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = -2

Query: 862 PFSTDLQSTPTTDSAFIEAWKKIIPNIEPPKTPLSFMQSRPPNPSTIPTKLTVNFVLP 689
           PFSTDL + P+ D+ F EAW K+IPN++PPKTPLSFMQ RPP PS+IP+KLTVNFVLP
Sbjct: 21  PFSTDLPAAPSADATFTEAWTKVIPNMDPPKTPLSFMQPRPPTPSSIPSKLTVNFVLP 78


>ref|XP_003529025.1| PREDICTED: ATP synthase subunit delta', mitochondrial-like [Glycine
           max]
          Length = 197

 Score =  204 bits (520), Expect(2) = 2e-71
 Identities = 103/116 (88%), Positives = 111/116 (95%)
 Frame = -1

Query: 614 KEVDMVIIPATTGHMGVLPGHVATIAELKPGVLSVHEGNDVNKYFVSSGFAFIHANSFAD 435
           KEVDMVI+PATTG MGVLPGHVATIAELKPGVLSVHEGNDV KYFVSSGFAFIHANS AD
Sbjct: 82  KEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVTKYFVSSGFAFIHANSVAD 141

Query: 434 IVAVEAVPLDQIDPSLVQKGLAEFTQKLSSASTDLEKAEAQIGVDLHSALNSALSG 267
           I+AVEAVP+D+ID +LVQKGL EFTQKL+SA+TDLEKAEAQIGVD+HSALNSALSG
Sbjct: 142 IIAVEAVPVDRIDVNLVQKGLQEFTQKLNSATTDLEKAEAQIGVDVHSALNSALSG 197



 Score = 92.0 bits (227), Expect(2) = 2e-71
 Identities = 39/56 (69%), Positives = 48/56 (85%)
 Frame = -2

Query: 856 STDLQSTPTTDSAFIEAWKKIIPNIEPPKTPLSFMQSRPPNPSTIPTKLTVNFVLP 689
           STD+ +TP  DS F EAWKK+ PNI+PPKTPL++M+ RPP PST+P+KLTVNFVLP
Sbjct: 19  STDVPATPAADSVFAEAWKKVSPNIDPPKTPLAYMKPRPPTPSTLPSKLTVNFVLP 74


>ref|XP_002326840.1| predicted protein [Populus trichocarpa] gi|222835155|gb|EEE73590.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score =  204 bits (520), Expect(2) = 2e-71
 Identities = 104/116 (89%), Positives = 110/116 (94%)
 Frame = -1

Query: 614 KEVDMVIIPATTGHMGVLPGHVATIAELKPGVLSVHEGNDVNKYFVSSGFAFIHANSFAD 435
           KEVDMVIIPA+TG MGVLPGHV+TI ELKPGVLSVHEGN+V KYFVSSGFAFIHANS AD
Sbjct: 83  KEVDMVIIPASTGQMGVLPGHVSTITELKPGVLSVHEGNEVKKYFVSSGFAFIHANSIAD 142

Query: 434 IVAVEAVPLDQIDPSLVQKGLAEFTQKLSSASTDLEKAEAQIGVDLHSALNSALSG 267
           IVAVEA PLDQID SLVQKGLAEFTQKLSSASTDLEKAEAQIGVD+HSALN+AL+G
Sbjct: 143 IVAVEAAPLDQIDSSLVQKGLAEFTQKLSSASTDLEKAEAQIGVDVHSALNAALTG 198



 Score = 91.7 bits (226), Expect(2) = 2e-71
 Identities = 41/57 (71%), Positives = 46/57 (80%)
 Frame = -2

Query: 859 FSTDLQSTPTTDSAFIEAWKKIIPNIEPPKTPLSFMQSRPPNPSTIPTKLTVNFVLP 689
           FST L +  T DS F EAWKK+ PN++PPKTPLSFMQ RPP PS IP+KLTVNFVLP
Sbjct: 19  FSTGLPAAQTIDSTFAEAWKKVAPNLDPPKTPLSFMQPRPPTPSAIPSKLTVNFVLP 75


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