BLASTX nr result
ID: Cimicifuga21_contig00006223
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00006223
(1187 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003519643.1| PREDICTED: protein NSP-INTERACTING KINASE 3-... 55 3e-13
ref|NP_176279.1| NSP-interacting kinase 3 [Arabidopsis thaliana]... 55 2e-12
ref|XP_002886588.1| nsp-interacting kinase 3 [Arabidopsis lyrata... 55 2e-12
emb|CBI28568.3| unnamed protein product [Vitis vinifera] 55 2e-12
ref|XP_002263138.1| PREDICTED: protein NSP-INTERACTING KINASE 3-... 55 2e-12
>ref|XP_003519643.1| PREDICTED: protein NSP-INTERACTING KINASE 3-like isoform 2 [Glycine
max] gi|223452428|gb|ACM89541.1| leucine-rich repeat
receptor-like kinase [Glycine max]
Length = 515
Score = 54.7 bits (130), Expect(2) = 3e-13
Identities = 52/180 (28%), Positives = 72/180 (40%), Gaps = 6/180 (3%)
Frame = -2
Query: 1183 VKRLKDYNVVASVVQFQRNRDDKFVCSLEFPPALWHLRNRKWKDSRLLFYAEWR*ILAEL 1004
VKRLKDYN +QFQ E+
Sbjct: 311 VKRLKDYNAAGGEIQFQ----------------------------------------TEV 330
Query: 1003 DFANQSLGFSFNPYIGFCNPQRRLGFSSPSLNRKLSLVVTSYPLSDRIDGKPALH*SRRK 824
+ + ++ + GFC+ Q P ++ + L D I G+PAL +RRK
Sbjct: 331 ETISLAVHRNLLRLSGFCSTQHERLLVYPYMSNGS----VASRLKDHIHGRPALDWTRRK 386
Query: 823 NKIGIGAVRGLLYLHEQCDPML------CS*SN*HSS**RVVGIFVCAKLLDVQDSPAST 662
+I +G RGL+YLHEQCDP + + VVG F AKLLD +DS +T
Sbjct: 387 -RIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTT 445
Score = 47.4 bits (111), Expect(2) = 3e-13
Identities = 33/64 (51%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Frame = -1
Query: 662 VNGTIVDIAPGYLSTRNSSQK-------ILFLN*LITCQKAFDIGLMICEKGVMLDSVSS 504
V GT+ IAP YLST SS+K IL L LIT KA D G +KGVMLD VSS
Sbjct: 447 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE-LITGHKALDFGRAANQKGVMLDWVSS 505
Query: 503 ACMF 492
F
Sbjct: 506 PTFF 509
>ref|NP_176279.1| NSP-interacting kinase 3 [Arabidopsis thaliana]
gi|75331811|sp|Q93ZS4.1|NIK3_ARATH RecName: Full=Protein
NSP-INTERACTING KINASE 3; AltName: Full=LRR
receptor-like serine/threonine-protein kinase NIK3;
Flags: Precursor gi|15810511|gb|AAL07143.1| putative
receptor kinase [Arabidopsis thaliana]
gi|23297726|gb|AAN12912.1| putative receptor kinase
[Arabidopsis thaliana] gi|224589455|gb|ACN59261.1|
leucine-rich repeat receptor-like protein kinase
[Arabidopsis thaliana] gi|332195613|gb|AEE33734.1|
NSP-interacting kinase 3 [Arabidopsis thaliana]
Length = 632
Score = 55.1 bits (131), Expect(2) = 2e-12
Identities = 37/77 (48%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Frame = -2
Query: 874 LSDRIDGKPALH*SRRKNKIGIGAVRGLLYLHEQCDPML------CS*SN*HSS**RVVG 713
L D I G+PAL SRRK KI +G RGL+YLHEQCDP + + VVG
Sbjct: 387 LKDNIRGEPALDWSRRK-KIAVGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVG 445
Query: 712 IFVCAKLLDVQDSPAST 662
F AKLLD +DS +T
Sbjct: 446 DFGLAKLLDHRDSHVTT 462
Score = 44.7 bits (104), Expect(2) = 2e-12
Identities = 31/58 (53%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Frame = -1
Query: 662 VNGTIVDIAPGYLSTRNSSQK-------ILFLN*LITCQKAFDIGLMICEKGVMLDSV 510
V GT+ IAP YLST SS+K IL L LIT QKA D G +KGVMLD V
Sbjct: 464 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE-LITGQKALDFGRSAHQKGVMLDWV 520
>ref|XP_002886588.1| nsp-interacting kinase 3 [Arabidopsis lyrata subsp. lyrata]
gi|297332429|gb|EFH62847.1| nsp-interacting kinase 3
[Arabidopsis lyrata subsp. lyrata]
Length = 629
Score = 55.1 bits (131), Expect(2) = 2e-12
Identities = 37/77 (48%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Frame = -2
Query: 874 LSDRIDGKPALH*SRRKNKIGIGAVRGLLYLHEQCDPML------CS*SN*HSS**RVVG 713
L D I G+PAL SRRK KI +G RGL+YLHEQCDP + + VVG
Sbjct: 384 LKDNIRGEPALDWSRRK-KIAVGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVG 442
Query: 712 IFVCAKLLDVQDSPAST 662
F AKLLD +DS +T
Sbjct: 443 DFGLAKLLDHRDSHVTT 459
Score = 44.7 bits (104), Expect(2) = 2e-12
Identities = 31/58 (53%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Frame = -1
Query: 662 VNGTIVDIAPGYLSTRNSSQK-------ILFLN*LITCQKAFDIGLMICEKGVMLDSV 510
V GT+ IAP YLST SS+K IL L LIT QKA D G +KGVMLD V
Sbjct: 461 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE-LITGQKALDFGRSAHQKGVMLDWV 517
>emb|CBI28568.3| unnamed protein product [Vitis vinifera]
Length = 626
Score = 55.1 bits (131), Expect(2) = 2e-12
Identities = 53/180 (29%), Positives = 72/180 (40%), Gaps = 6/180 (3%)
Frame = -2
Query: 1183 VKRLKDYNVVASVVQFQRNRDDKFVCSLEFPPALWHLRNRKWKDSRLLFYAEWR*ILAEL 1004
VKRLKDYN V +QFQ E+
Sbjct: 330 VKRLKDYNAVGGEIQFQ----------------------------------------TEV 349
Query: 1003 DFANQSLGFSFNPYIGFCNPQRRLGFSSPSLNRKLSLVVTSYPLSDRIDGKPALH*SRRK 824
+ + ++ + GFC + P + + L D+I G+PAL SRRK
Sbjct: 350 EMISLAVHRNLLRLCGFCTTESERLLVYPYMPNGS----VASRLRDQIHGRPALDWSRRK 405
Query: 823 NKIGIGAVRGLLYLHEQCDPML------CS*SN*HSS**RVVGIFVCAKLLDVQDSPAST 662
+I +G RGLLYLHEQCDP + + VVG F AKLLD ++S +T
Sbjct: 406 -RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRESHVTT 464
Score = 44.7 bits (104), Expect(2) = 2e-12
Identities = 31/58 (53%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Frame = -1
Query: 662 VNGTIVDIAPGYLSTRNSSQK-------ILFLN*LITCQKAFDIGLMICEKGVMLDSV 510
V GT+ IAP YLST SS+K IL L LIT QKA D G +KGVMLD V
Sbjct: 466 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE-LITGQKALDFGRAANQKGVMLDWV 522
>ref|XP_002263138.1| PREDICTED: protein NSP-INTERACTING KINASE 3-like [Vitis vinifera]
Length = 623
Score = 55.1 bits (131), Expect(2) = 2e-12
Identities = 53/180 (29%), Positives = 72/180 (40%), Gaps = 6/180 (3%)
Frame = -2
Query: 1183 VKRLKDYNVVASVVQFQRNRDDKFVCSLEFPPALWHLRNRKWKDSRLLFYAEWR*ILAEL 1004
VKRLKDYN V +QFQ E+
Sbjct: 327 VKRLKDYNAVGGEIQFQ----------------------------------------TEV 346
Query: 1003 DFANQSLGFSFNPYIGFCNPQRRLGFSSPSLNRKLSLVVTSYPLSDRIDGKPALH*SRRK 824
+ + ++ + GFC + P + + L D+I G+PAL SRRK
Sbjct: 347 EMISLAVHRNLLRLCGFCTTESERLLVYPYMPNGS----VASRLRDQIHGRPALDWSRRK 402
Query: 823 NKIGIGAVRGLLYLHEQCDPML------CS*SN*HSS**RVVGIFVCAKLLDVQDSPAST 662
+I +G RGLLYLHEQCDP + + VVG F AKLLD ++S +T
Sbjct: 403 -RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRESHVTT 461
Score = 44.7 bits (104), Expect(2) = 2e-12
Identities = 31/58 (53%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Frame = -1
Query: 662 VNGTIVDIAPGYLSTRNSSQK-------ILFLN*LITCQKAFDIGLMICEKGVMLDSV 510
V GT+ IAP YLST SS+K IL L LIT QKA D G +KGVMLD V
Sbjct: 463 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE-LITGQKALDFGRAANQKGVMLDWV 519