BLASTX nr result

ID: Cimicifuga21_contig00006219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006219
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632356.1| PREDICTED: uncharacterized protein LOC100854...    80   2e-13
emb|CAN77097.1| hypothetical protein VITISV_002769 [Vitis vinifera]    80   3e-13
ref|XP_002520763.1| conserved hypothetical protein [Ricinus comm...    75   9e-12
ref|XP_002306767.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
gb|ADT82942.1| chloroplast outer envelope protein 8 [Suaeda salsa]     69   5e-10

>ref|XP_003632356.1| PREDICTED: uncharacterized protein LOC100854564 [Vitis vinifera]
          Length = 70

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/68 (58%), Positives = 48/68 (70%), Gaps = 4/68 (5%)
 Frame = +2

Query: 170 MGSSAKVNSFKSAIVVLGALAFGWLTIEIACKPFLEKARDAMEKSDPTHDPDDD----SG 337
           MG S +    KS +VV GALAFGWL IE+A KPFL+KAR A++KSDPT DPDDD    + 
Sbjct: 1   MGKSTEAGPLKSVMVVFGALAFGWLAIELAFKPFLDKARSALDKSDPTRDPDDDEDGGTT 60

Query: 338 SKFPSDED 361
            K  SDE+
Sbjct: 61  QKSLSDEE 68


>emb|CAN77097.1| hypothetical protein VITISV_002769 [Vitis vinifera]
          Length = 70

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 36/54 (66%), Positives = 42/54 (77%)
 Frame = +2

Query: 170 MGSSAKVNSFKSAIVVLGALAFGWLTIEIACKPFLEKARDAMEKSDPTHDPDDD 331
           MG S +    KS +VV GALAFGWL IE+A KPFL+KAR A++KSDPT DPDDD
Sbjct: 1   MGKSTEAGPLKSVMVVFGALAFGWLAIELAFKPFLDKARSALDKSDPTRDPDDD 54


>ref|XP_002520763.1| conserved hypothetical protein [Ricinus communis]
           gi|223540148|gb|EEF41725.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 69

 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 35/52 (67%), Positives = 40/52 (76%)
 Frame = +2

Query: 200 KSAIVVLGALAFGWLTIEIACKPFLEKARDAMEKSDPTHDPDDDSGSKFPSD 355
           K A+VV+GALAFGWL IE+A KPFL+KAR AM+KSDP  DPDD      PSD
Sbjct: 7   KQAMVVVGALAFGWLAIEMAFKPFLDKARAAMDKSDPERDPDDSPPKDLPSD 58


>ref|XP_002306767.1| predicted protein [Populus trichocarpa] gi|222856216|gb|EEE93763.1|
           predicted protein [Populus trichocarpa]
          Length = 77

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 33/47 (70%), Positives = 36/47 (76%)
 Frame = +2

Query: 200 KSAIVVLGALAFGWLTIEIACKPFLEKARDAMEKSDPTHDPDDDSGS 340
           K A VV GALAFGWL IE+A KPFL+KAR AM+KSDP  DPD D  S
Sbjct: 7   KQAAVVFGALAFGWLAIEMAFKPFLDKARSAMDKSDPARDPDGDDDS 53


>gb|ADT82942.1| chloroplast outer envelope protein 8 [Suaeda salsa]
          Length = 76

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 31/51 (60%), Positives = 38/51 (74%)
 Frame = +2

Query: 179 SAKVNSFKSAIVVLGALAFGWLTIEIACKPFLEKARDAMEKSDPTHDPDDD 331
           + K  S K A +V+ ALAFGWLTIE+A KP+L+KAR  + KSDP HDPD D
Sbjct: 5   ATKSGSLKQAAIVMSALAFGWLTIELAFKPWLDKARATLNKSDPNHDPDVD 55


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