BLASTX nr result

ID: Cimicifuga21_contig00006214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006214
         (1813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517663.1| signal recognition particle 54 kD protein, p...   885   0.0  
ref|XP_003545781.1| PREDICTED: signal recognition particle 54 kD...   884   0.0  
ref|XP_003543686.1| PREDICTED: signal recognition particle 54 kD...   883   0.0  
ref|XP_003528309.1| PREDICTED: signal recognition particle 54 kD...   880   0.0  
ref|XP_002264159.1| PREDICTED: signal recognition particle 54 kD...   875   0.0  

>ref|XP_002517663.1| signal recognition particle 54 kD protein, putative [Ricinus
            communis] gi|223543295|gb|EEF44827.1| signal recognition
            particle 54 kD protein, putative [Ricinus communis]
          Length = 497

 Score =  885 bits (2288), Expect = 0.0
 Identities = 446/479 (93%), Positives = 461/479 (96%)
 Frame = -2

Query: 1785 MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 1606
            MVLAQLGGSISRA+QQMSNATIIDEK LN+CLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1    MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 1605 NLDDLAAGHNKRRIIQQAIFNELCKILDPGKPSFTPKKAKTSVIMFVGLQGSGKTTTCTK 1426
            NLDDLAAGHNKR+IIQQAIFNELCK+LDPGKPSFTPKK KTSV+MFVGLQGSGKTTTCTK
Sbjct: 61   NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 1425 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVRIAAEGVERFK 1246
            YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPV+IA EGVERFK
Sbjct: 121  YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 1245 KENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGXXXXXXXXXFKKSV 1066
            KENCDLIIVDTSGRHKQEAALFEEMRQV+EATKPDLVIFVMDSSIG         FK+SV
Sbjct: 181  KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 1065 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 886
            +VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241  AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 885  SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 706
            SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS+EL
Sbjct: 301  SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAEL 360

Query: 705  MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGSGRAVREVMEMLE 526
            MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN+SR+MRIARGSGR VREVMEM E
Sbjct: 361  MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMFE 420

Query: 525  EYKRLAKIWSKMKGLKIPKKGDMSALARNNNAQTMGKVLPPQMLKQIGGMAGLQNLMKQ 349
            EYKRLAKIWSKMKGLKIPKKG+MSAL+RN NAQ M KVLPPQMLKQIGGM GLQNLMKQ
Sbjct: 421  EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQ 479


>ref|XP_003545781.1| PREDICTED: signal recognition particle 54 kDa protein 2-like [Glycine
            max]
          Length = 499

 Score =  884 bits (2283), Expect = 0.0
 Identities = 445/479 (92%), Positives = 460/479 (96%)
 Frame = -2

Query: 1785 MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 1606
            MVLA+LGGSISRALQQMSNAT+IDEKVLN+CLN ITRALLQSDVQFKLVRD+QTNIK IV
Sbjct: 1    MVLAELGGSISRALQQMSNATVIDEKVLNDCLNVITRALLQSDVQFKLVRDLQTNIKNIV 60

Query: 1605 NLDDLAAGHNKRRIIQQAIFNELCKILDPGKPSFTPKKAKTSVIMFVGLQGSGKTTTCTK 1426
            NLDDLAAGHNKRRIIQQA+FNELCKILDPGKPSFTPKK KTSV+MFVGLQGSGKTTTCTK
Sbjct: 61   NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 1425 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVRIAAEGVERFK 1246
            YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPV+IA EGVERFK
Sbjct: 121  YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 1245 KENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGXXXXXXXXXFKKSV 1066
            KENCDLIIVDTSGRHKQEAALFEEMRQV+EATKPDLVIFVMDSSIG         FK+SV
Sbjct: 181  KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 1065 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 886
            +VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241  AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 885  SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 706
            SGFMDKI EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS+EL
Sbjct: 301  SGFMDKIQEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAEL 360

Query: 705  MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGSGRAVREVMEMLE 526
            MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARG+GR +REVMEMLE
Sbjct: 361  MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGAGRQIREVMEMLE 420

Query: 525  EYKRLAKIWSKMKGLKIPKKGDMSALARNNNAQTMGKVLPPQMLKQIGGMAGLQNLMKQ 349
            EYKRLAKIWSKMKGLKIPKKGDMSAL+RN NAQ M KVLPPQMLKQIGGM GLQNLMKQ
Sbjct: 421  EYKRLAKIWSKMKGLKIPKKGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQ 479


>ref|XP_003543686.1| PREDICTED: signal recognition particle 54 kDa protein 2-like [Glycine
            max]
          Length = 500

 Score =  883 bits (2282), Expect = 0.0
 Identities = 444/479 (92%), Positives = 460/479 (96%)
 Frame = -2

Query: 1785 MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 1606
            MVLA+LGGSISRALQ MSNAT+IDEKVLN+CLN+ITRALLQSDVQFKLVRDMQTNIK IV
Sbjct: 1    MVLAELGGSISRALQLMSNATVIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKNIV 60

Query: 1605 NLDDLAAGHNKRRIIQQAIFNELCKILDPGKPSFTPKKAKTSVIMFVGLQGSGKTTTCTK 1426
            NLDDLAAGHNKRRIIQQA+FNELCKILDPGKPSFTPKK KTSV+MFVGLQGSGKTTTCTK
Sbjct: 61   NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 1425 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVRIAAEGVERFK 1246
            YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPV+IA EGVERFK
Sbjct: 121  YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 1245 KENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGXXXXXXXXXFKKSV 1066
            KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIG         FK+SV
Sbjct: 181  KENCDLIIVDTSGRHKQEASLFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 1065 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 886
            +VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241  AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 885  SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 706
            SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI QVFSMLPGFS+EL
Sbjct: 301  SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPISQVFSMLPGFSAEL 360

Query: 705  MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGSGRAVREVMEMLE 526
            MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARG+GR +REVMEMLE
Sbjct: 361  MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGAGRQIREVMEMLE 420

Query: 525  EYKRLAKIWSKMKGLKIPKKGDMSALARNNNAQTMGKVLPPQMLKQIGGMAGLQNLMKQ 349
            EYKRLAKIWSKMKGLKIPKKGDMSAL+RN NAQ M KVLPPQMLKQIGGM GLQNLMKQ
Sbjct: 421  EYKRLAKIWSKMKGLKIPKKGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQ 479


>ref|XP_003528309.1| PREDICTED: signal recognition particle 54 kDa protein 2-like [Glycine
            max]
          Length = 495

 Score =  880 bits (2274), Expect = 0.0
 Identities = 443/479 (92%), Positives = 461/479 (96%)
 Frame = -2

Query: 1785 MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 1606
            MVLA+LGGSISRALQQMSNATIIDEKVLN+CLN+ITRALLQSDVQFKLVRDMQTNIK IV
Sbjct: 1    MVLAELGGSISRALQQMSNATIIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKNIV 60

Query: 1605 NLDDLAAGHNKRRIIQQAIFNELCKILDPGKPSFTPKKAKTSVIMFVGLQGSGKTTTCTK 1426
            NL+DLAAGHNKRRIIQQA+FNELCKILDPGKPSFTPKK KTSV+MFVGLQGSGKTTTCTK
Sbjct: 61   NLEDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 1425 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVRIAAEGVERFK 1246
            YA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPV+IA EGVERFK
Sbjct: 121  YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 1245 KENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGXXXXXXXXXFKKSV 1066
            +ENCDLIIVDTSGRHKQEAALFEEMRQV+EATKPDLVIFVMDSSIG         FK+SV
Sbjct: 181  QENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 1065 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 886
            +VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241  AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 885  SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 706
            SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQN+LKMGPI QVFSMLPGFS+EL
Sbjct: 301  SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 705  MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGSGRAVREVMEMLE 526
            MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGSGR VREVMEMLE
Sbjct: 361  MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGSGRPVREVMEMLE 420

Query: 525  EYKRLAKIWSKMKGLKIPKKGDMSALARNNNAQTMGKVLPPQMLKQIGGMAGLQNLMKQ 349
            EYKRLAKIWSKMKGLKIPKKG+MSAL+RN NAQ M KVLPPQMLKQIGGM GLQ+LMKQ
Sbjct: 421  EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQ 479


>ref|XP_002264159.1| PREDICTED: signal recognition particle 54 kDa protein 2 [Vitis
            vinifera]
          Length = 495

 Score =  875 bits (2261), Expect = 0.0
 Identities = 440/479 (91%), Positives = 459/479 (95%)
 Frame = -2

Query: 1785 MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 1606
            MVL++LGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKK+V
Sbjct: 1    MVLSELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKLV 60

Query: 1605 NLDDLAAGHNKRRIIQQAIFNELCKILDPGKPSFTPKKAKTSVIMFVGLQGSGKTTTCTK 1426
            N DDLAAGHNKR+IIQQAIF ELCK+LDPGKPSFTPKK KTSV+MFVGLQGSGKTTTCTK
Sbjct: 61   NFDDLAAGHNKRKIIQQAIFQELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 1425 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVRIAAEGVERFK 1246
            YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPV+IA EGVERFK
Sbjct: 121  YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 1245 KENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGXXXXXXXXXFKKSV 1066
            KENCDLIIVDTSGRHKQEAALFEEMRQV+EAT+PDLVIFVMDSSIG         F++SV
Sbjct: 181  KENCDLIIVDTSGRHKQEAALFEEMRQVSEATRPDLVIFVMDSSIGQAAFDQAQAFRQSV 240

Query: 1065 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 886
            +VGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241  AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 885  SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 706
            SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS+EL
Sbjct: 301  SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAEL 360

Query: 705  MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGSGRAVREVMEMLE 526
            MPKGREKESQAKIKRYMTMMDSMTNEELD+SNPKLMNESR+MRIARGSGR VREVMEMLE
Sbjct: 361  MPKGREKESQAKIKRYMTMMDSMTNEELDTSNPKLMNESRIMRIARGSGRQVREVMEMLE 420

Query: 525  EYKRLAKIWSKMKGLKIPKKGDMSALARNNNAQTMGKVLPPQMLKQIGGMAGLQNLMKQ 349
            EYKRLAKIWSKMKGLKIPKKG+MSAL+RN NAQ M K++P QMLKQIGGM  LQNLMKQ
Sbjct: 421  EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKIIPQQMLKQIGGMGALQNLMKQ 479


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