BLASTX nr result
ID: Cimicifuga21_contig00006211
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00006211
(2598 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vit... 553 e-155
ref|XP_004165011.1| PREDICTED: PHD finger protein At1g33420-like... 547 e-153
ref|XP_004144350.1| PREDICTED: PHD finger protein At1g33420-like... 545 e-152
ref|XP_002518819.1| DNA binding protein, putative [Ricinus commu... 536 e-149
ref|XP_002305350.1| predicted protein [Populus trichocarpa] gi|2... 534 e-149
>ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vitis vinifera]
gi|296084820|emb|CBI27702.3| unnamed protein product
[Vitis vinifera]
Length = 692
Score = 553 bits (1426), Expect = e-155
Identities = 281/528 (53%), Positives = 355/528 (67%), Gaps = 16/528 (3%)
Frame = +2
Query: 5 LSDRRCKTCNYELTAADYEDWMHLQLEDTTHLLHGVVHANGYGHLLRVNGREGGSKFLSG 184
LSD RCK+CN +TA D EDW++ QL+DTTHLLHGVVHANGYGHLLRVNGREGGS+ LSG
Sbjct: 146 LSDSRCKSCNKLMTADDTEDWVYHQLDDTTHLLHGVVHANGYGHLLRVNGREGGSRILSG 205
Query: 185 CDIMNFWDRLCRKLRARKISVMDVSKKYGLEFRLLHAVTNGHTWYGSWGFEFGTGSFALT 364
C IM+FWDRLC+ L RK+SVMDVSKK+GLEFRLLHA+T GH WYG WG+EFG GSFALT
Sbjct: 206 CHIMDFWDRLCKNLGVRKVSVMDVSKKHGLEFRLLHAITKGHPWYGEWGYEFGAGSFALT 265
Query: 365 LDDYRKAVDYLSETPLSFFF-QDRKPRTRLQDVITFYQALSECQLSTIRDLFCFLTGLIR 541
LD Y+ AV+ LS PLS F Q RKPRT LQD+I++YQ+LSE +L RDLF FL LI
Sbjct: 266 LDAYKAAVETLSTLPLSIFVSQGRKPRTHLQDLISYYQSLSERELVHARDLFWFLMSLIH 325
Query: 542 KTEKSELASK----SKKYESSSTVLCSWTIDDIDRVQQSMIKVLQVAGGNGWVSWRALKG 709
KS K+ + +LC+WT +DI+RV+++M +VL+ G+ WVSWRAL+G
Sbjct: 326 DAHKSSPTKNDITCKKRRSCTPGILCAWTRNDIERVEEAMFRVLRAVTGSNWVSWRALRG 385
Query: 710 STFRLGSSELLDYCLRVLDGKALDEERMVLSRCNPESDAIEYRL---------VSRSVDK 862
+ ++ ELLDYCL+ L GK +V RCNP+S A+EYRL ++ D
Sbjct: 386 AVCKVAPPELLDYCLKELGGKLTSYGVVVQVRCNPDSGAVEYRLDPGSIPSNGIAACTDF 445
Query: 863 GRSSCPSKDHIXXXXXXXXXXXXXPHTMLNYRLKATREQAVLSAMKLLDCKQFVKDYESE 1042
S+C S+ H+ P TM +Y +ATR+ AV SA KLLDCKQFVKDY E
Sbjct: 446 NLSNCRSEQHLLQDLRFLYEAILNPQTMPSYGPQATRDLAVSSAAKLLDCKQFVKDYRPE 505
Query: 1043 R-VALENPFSLTLSCRVQLVDQPMD-YTSPPPELIFLPXXXXXXXXXXXXXXXFRDMYVL 1216
+ +++ NPF + LSC V+L++ + T PPPELI L F+D+Y++
Sbjct: 506 KGLSITNPFGVHLSCLVELMELSEEGDTKPPPELIVLSPNATISDLKLEASRAFQDVYLM 565
Query: 1217 FKRFQVDELLGYDEIDESSQIKFLIGSSGSIMVRGRLNXXXXXXXXXXXQFRMERGVENW 1396
FKRF+ +EL+GY +DES+Q+K L+GS ++ VRGR +FRMERG E W
Sbjct: 566 FKRFKAEELVGYAGVDESTQLKLLLGSIETVEVRGR-----CLGKNGLSRFRMERGQERW 620
Query: 1397 IVNCTCGAKDDDGERMLACDACGIWQHTRCARIDDRDVVPESFKCLKC 1540
V+C+CGAKDDDGERMLACD CG+WQHTRCA I D VP F C +C
Sbjct: 621 TVDCSCGAKDDDGERMLACDGCGVWQHTRCAEIPDSAAVPARFICWRC 668
>ref|XP_004165011.1| PREDICTED: PHD finger protein At1g33420-like [Cucumis sativus]
Length = 668
Score = 547 bits (1410), Expect = e-153
Identities = 271/527 (51%), Positives = 356/527 (67%), Gaps = 13/527 (2%)
Frame = +2
Query: 5 LSDRRCKTCNYELTAADYEDWMHLQLEDTTHLLHGVVHANGYGHLLRVNGREGGSKFLSG 184
LS+ +CK+CN+ + D EDW++ QLE+ THLLH VVH+NGYGHLLRVNGREGGSK LSG
Sbjct: 124 LSESKCKSCNHVTSTDDVEDWVYQQLENNTHLLHAVVHSNGYGHLLRVNGREGGSKHLSG 183
Query: 185 CDIMNFWDRLCRKLRARKISVMDVSKKYGLEFRLLHAVTNGHTWYGSWGFEFGTGSFALT 364
C IM+FWDR C+ L RK+SVMDVSKKYG+E+RLLHA+T GH WYG WG+EFG GSFA+T
Sbjct: 184 CHIMDFWDRFCKMLGVRKVSVMDVSKKYGVEYRLLHAITKGHPWYGEWGYEFGAGSFAVT 243
Query: 365 LDDYRKAVDYLSETPLSFF-FQDRKPRTRLQDVITFYQALSECQLSTIRDLFCFLTGLIR 541
D Y+ AV+ LS PLS F Q RKPR+ LQD+I +YQ+LSE +L +RDLF FL LI
Sbjct: 244 PDAYKMAVETLSSLPLSIFTSQGRKPRSHLQDIILYYQSLSERKLVNVRDLFKFLMSLIH 303
Query: 542 KTEKSELASKSKKYE-SSSTVLCSWTIDDIDRVQQSMIKVLQVAGGNGWVSWRALKGSTF 718
KS + E S VLCSWT D+ RV+++M+KVL G+ WV+WR L+G+
Sbjct: 304 NVRKSSSTTNDIMDEKQQSKVLCSWTKSDVTRVEEAMLKVLHAVSGSNWVTWRTLRGAVC 363
Query: 719 RLGSSELLDYCLRVLDGKALDEERMVLSRCNPESDAIEYRLV---------SRSVDKGRS 871
+ G ELLDYCL+ L GK + +V ++ NP+S A EYRL S S + S
Sbjct: 364 KAGPPELLDYCLKNLGGKVSSDGMVVNAQRNPQSGAFEYRLEPGSASLNTGSDSTESSIS 423
Query: 872 SCPSKDHIXXXXXXXXXXXXXPHTMLNYRLKATREQAVLSAMKLLDCKQFVKDYESERVA 1051
S PS++++ P++M+NY +ATRE AV SA+KL+DCKQFVKDYE E+++
Sbjct: 424 SYPSEENLLLDLRFLYDAMLHPNSMVNYGPQATREAAVSSALKLIDCKQFVKDYEPEKLS 483
Query: 1052 LE-NPFSLTLSCRVQLVDQPMDYTS-PPPELIFLPXXXXXXXXXXXXXXXFRDMYVLFKR 1225
+ NPFS+ L C V++V+ D +S PPPEL+ LP F+D+Y++F+R
Sbjct: 484 TKLNPFSICLLCEVEVVEDSKDNSSRPPPELVILPSNATMSDLKLEASKAFQDVYLMFRR 543
Query: 1226 FQVDELLGYDEIDESSQIKFLIGSSGSIMVRGRLNXXXXXXXXXXXQFRMERGVENWIVN 1405
FQ +E++ + +D+S+Q+K L G + S+ VRGR +FRMERGVE W V+
Sbjct: 544 FQAEEIVDHGGVDDSTQVKLLFGQTESVRVRGRCQ-----VKTALNRFRMERGVERWTVD 598
Query: 1406 CTCGAKDDDGERMLACDACGIWQHTRCARIDDRDVVPESFKCLKCRN 1546
C+CGAKDDDGERMLACD CG+W+HTRC+ I D D VP F C KCR+
Sbjct: 599 CSCGAKDDDGERMLACDLCGVWRHTRCSGIQDSDDVPGKFVCYKCRS 645
>ref|XP_004144350.1| PREDICTED: PHD finger protein At1g33420-like [Cucumis sativus]
Length = 668
Score = 545 bits (1404), Expect = e-152
Identities = 270/527 (51%), Positives = 355/527 (67%), Gaps = 13/527 (2%)
Frame = +2
Query: 5 LSDRRCKTCNYELTAADYEDWMHLQLEDTTHLLHGVVHANGYGHLLRVNGREGGSKFLSG 184
LS+ +CK+CN+ + D EDW++ QLE+ THLLH VVH+NGYGHLLRVNGREGGSK LSG
Sbjct: 124 LSESKCKSCNHVTSTDDVEDWVYQQLENNTHLLHAVVHSNGYGHLLRVNGREGGSKHLSG 183
Query: 185 CDIMNFWDRLCRKLRARKISVMDVSKKYGLEFRLLHAVTNGHTWYGSWGFEFGTGSFALT 364
C IM+FWDR C+ L RK+SVMDVSKKYG+E+RLLHA+T H WYG WG+EFG GSFA+T
Sbjct: 184 CHIMDFWDRFCKMLGVRKVSVMDVSKKYGVEYRLLHAITKSHPWYGEWGYEFGAGSFAVT 243
Query: 365 LDDYRKAVDYLSETPLSFF-FQDRKPRTRLQDVITFYQALSECQLSTIRDLFCFLTGLIR 541
D Y+ AV+ LS PLS F Q RKPR+ LQD+I +YQ+LSE +L +RDLF FL LI
Sbjct: 244 PDAYKMAVETLSSLPLSIFTSQGRKPRSHLQDIILYYQSLSERKLVNVRDLFKFLMSLIH 303
Query: 542 KTEKSELASKSKKYE-SSSTVLCSWTIDDIDRVQQSMIKVLQVAGGNGWVSWRALKGSTF 718
KS + E S VLCSWT D+ RV+++M+KVL G+ WV+WR L+G+
Sbjct: 304 NVRKSSSTTNDIMDEKQQSKVLCSWTKSDVTRVEEAMLKVLHAVSGSNWVTWRTLRGAVC 363
Query: 719 RLGSSELLDYCLRVLDGKALDEERMVLSRCNPESDAIEYRLV---------SRSVDKGRS 871
+ G ELLDYCL+ L GK + +V ++ NP+S A EYRL S S + S
Sbjct: 364 KAGPPELLDYCLKNLGGKVSSDGMVVNAQRNPQSGAFEYRLEPGSASLNTGSDSTESSIS 423
Query: 872 SCPSKDHIXXXXXXXXXXXXXPHTMLNYRLKATREQAVLSAMKLLDCKQFVKDYESERVA 1051
S PS++++ P++M+NY +ATRE AV SA+KL+DCKQFVKDYE E+++
Sbjct: 424 SYPSEENLLLDLRFLYDAMLHPNSMVNYGPQATREAAVSSALKLIDCKQFVKDYEPEKLS 483
Query: 1052 LE-NPFSLTLSCRVQLVDQPMDYTS-PPPELIFLPXXXXXXXXXXXXXXXFRDMYVLFKR 1225
+ NPFS+ L C V++V+ D +S PPPEL+ LP F+D+Y++F+R
Sbjct: 484 TKLNPFSICLLCEVEVVEDSKDNSSRPPPELVILPSNATMSDLKLEASKAFQDVYLMFRR 543
Query: 1226 FQVDELLGYDEIDESSQIKFLIGSSGSIMVRGRLNXXXXXXXXXXXQFRMERGVENWIVN 1405
FQ +E++ + +D+S+Q+K L G + S+ VRGR +FRMERGVE W V+
Sbjct: 544 FQAEEIVDHGGVDDSTQVKLLFGQTESVRVRGRCQ-----VKTALNRFRMERGVERWTVD 598
Query: 1406 CTCGAKDDDGERMLACDACGIWQHTRCARIDDRDVVPESFKCLKCRN 1546
C+CGAKDDDGERMLACD CG+W+HTRC+ I D D VP F C KCR+
Sbjct: 599 CSCGAKDDDGERMLACDLCGVWRHTRCSGIQDSDDVPGKFVCYKCRS 645
>ref|XP_002518819.1| DNA binding protein, putative [Ricinus communis]
gi|223542200|gb|EEF43744.1| DNA binding protein, putative
[Ricinus communis]
Length = 677
Score = 536 bits (1380), Expect = e-149
Identities = 271/530 (51%), Positives = 356/530 (67%), Gaps = 15/530 (2%)
Frame = +2
Query: 5 LSDRRCKTCNYELTAADYEDWMHLQLEDTTHLLHGVVHANGYGHLLRVNGREGGSKFLSG 184
+S+ RCK CN+ T D EDW++ QLEDTTHLLHGVVHANGYGHLLRVNGREGGS+ LSG
Sbjct: 145 VSELRCKICNHVTTTDDVEDWVYHQLEDTTHLLHGVVHANGYGHLLRVNGREGGSRILSG 204
Query: 185 CDIMNFWDRLCRKLRARKISVMDVSKKYGLEFRLLHAVTNGHTWYGSWGFEFGTGSFALT 364
C IM+FWDRLC+ L RK+SVMDVSKKYGLE+RLLHA+ GH WYG WG+EFG GSFALT
Sbjct: 205 CHIMDFWDRLCKTLGVRKVSVMDVSKKYGLEYRLLHAIIKGHPWYGDWGYEFGAGSFALT 264
Query: 365 LDDYRKAVDYLSETPLSFFF-QDRKPRTRLQDVITFYQALSECQLSTIRDLFCFLTGLIR 541
+D Y+ AV+ LS PLS F Q K RT LQDVI+FYQ+LS+C+L RDLFC+L LIR
Sbjct: 265 VDAYKSAVETLSSIPLSIFLSQGGKLRTHLQDVISFYQSLSDCELVNTRDLFCYLINLIR 324
Query: 542 KTEKSELA---SKSKKYESSSTVLCSWTIDDIDRVQQSMIKVLQVAGGNGWVSWRALKGS 712
KS S S K + + V SW +D++RV+++M++VL+ + WVSWRAL+G+
Sbjct: 325 DAHKSSSRVEDSTSSKCNTITGVSSSWPKNDVERVEEAMLRVLKAVSESTWVSWRALRGA 384
Query: 713 TFRLGSSELLDYCLRVLDGKALDEERMVLSRCNPESDAIEYRL--------VSRSVDKGR 868
++ LLD+CL+ L GKA + +V +RCNP+S A EYRL + +
Sbjct: 385 VCKVAPPNLLDHCLKELGGKAAADGMIVGTRCNPDSGAFEYRLEPGNPPSNCTIGIGTSA 444
Query: 869 SSCPSKDHIXXXXXXXXXXXXXPHTMLNYRLKATREQAVLSAMKLLDCKQFVKDYESERV 1048
SCPS++ + P TM++Y +AT++ A SA KLLDCKQFVK+Y +E +
Sbjct: 445 ISCPSEESLLQDLRFLYECLLHPKTMVSYVTEATKDFASGSAEKLLDCKQFVKEYMAENI 504
Query: 1049 -ALENPFSLTLSCRVQLVDQPMDYTSP--PPELIFLPXXXXXXXXXXXXXXXFRDMYVLF 1219
NP L LSC V+++D+ M+ SP PPELI LP F+++Y++F
Sbjct: 505 PPTTNPSVLCLSCNVEIMDE-MEENSPNHPPELIVLPPNATVSDLKLEASRAFQEVYLMF 563
Query: 1220 KRFQVDELLGYDEIDESSQIKFLIGSSGSIMVRGRLNXXXXXXXXXXXQFRMERGVENWI 1399
KRF+ +ELLGY +D+S+Q+K L+ S ++VRGR ++RMERG+E W
Sbjct: 564 KRFRGEELLGYSGVDDSTQVKLLLESVECVVVRGR-----CLGKNGLGKYRMERGIERWT 618
Query: 1400 VNCTCGAKDDDGERMLACDACGIWQHTRCARIDDRDVVPESFKCLKCRNL 1549
++C+CGAK+DDGERMLACD CG+WQHTRC+ I D D VP F C +CR+L
Sbjct: 619 IDCSCGAKNDDGERMLACDVCGVWQHTRCSGILDSDSVPAKFICRRCRDL 668
>ref|XP_002305350.1| predicted protein [Populus trichocarpa] gi|222848314|gb|EEE85861.1|
predicted protein [Populus trichocarpa]
Length = 688
Score = 534 bits (1376), Expect = e-149
Identities = 265/534 (49%), Positives = 350/534 (65%), Gaps = 21/534 (3%)
Frame = +2
Query: 5 LSDRRCKTCNYELTAADYEDWMHLQLEDTTHLLHGVVHANGYGHLLRVNGREGGSKFLSG 184
LS+ RCK C++ +TA D E+W++ QLEDTTHLLHGV+HANGYGHLLRVNG+EGGS+ LSG
Sbjct: 161 LSESRCKACDHVITADDVEEWVYHQLEDTTHLLHGVIHANGYGHLLRVNGKEGGSRVLSG 220
Query: 185 CDIMNFWDRLCRKLRARKISVMDVSKKYGLEFRLLHAVTNGHTWYGSWGFEFGTGSFALT 364
C IM+FWDRLC+ L RK+SVMDVSKKYG+E+RLLHA+T GH+WYG WG+EFG GSF LT
Sbjct: 221 CHIMDFWDRLCKSLGVRKVSVMDVSKKYGIEYRLLHAITKGHSWYGDWGYEFGAGSFGLT 280
Query: 365 LDDYRKAVDYLSETPLSFFFQD-RKPRTRLQDVITFYQALSECQLSTIRDLFCFLTGLIR 541
+D Y+ AV+ LS P+S F + +K TRLQD I FYQ+LS+ +L RDLFC+LT LI
Sbjct: 281 VDAYKPAVETLSSLPVSIFLSEGQKTHTRLQDTIKFYQSLSDHELVNTRDLFCYLTSLIH 340
Query: 542 KTEKSELASKSKKYESSSTVLC---------SWTIDDIDRVQQSMIKVLQVAGGNGWVSW 694
KS + + SS C SWT DI+RV+++M +VL+ G+ WVSW
Sbjct: 341 DAHKS-----TSGVDDSSCKKCPFYAPGISPSWTRGDIERVEEAMFRVLRAVSGSNWVSW 395
Query: 695 RALKGSTFRLGSSELLDYCLRVLDGKALDEERMVLSRCNPESDAIEYRL---------VS 847
RAL+G+ F++ ELLD+CL+ L GK + +V SRCNP S A EYRL +
Sbjct: 396 RALRGAVFKVAPPELLDHCLKELGGKFAADGMIVSSRCNPSSGAFEYRLEPGNPSLNSTA 455
Query: 848 RSVDKGRSSCPSKDHIXXXXXXXXXXXXXPHTMLNYRLKATREQAVLSAMKLLDCKQFVK 1027
++ +CPS++++ P TML++ + T + ++SA KLLDCKQF+K
Sbjct: 456 AAIGSTVITCPSEENLIQDLRFLYENMLLPQTMLSFGHEVTSDAGIISARKLLDCKQFMK 515
Query: 1028 DY-ESERVALENPFSLTLSCRVQLVDQ-PMDYTSPPPELIFLPXXXXXXXXXXXXXXXFR 1201
DY + E P ++ LSC V++VDQ + + PPE + LP F+
Sbjct: 516 DYNKCETTVASVPNTIFLSCEVEIVDQLEENVPNLPPETVVLPSNATVFDLKREASRAFQ 575
Query: 1202 DMYVLFKRFQVDELLGYDEIDESSQIKFLIGSSGSIMVRGRLNXXXXXXXXXXXQFRMER 1381
D+Y++F+RF +ELLGY +D+S+Q+K LIGS+ S+ RGR +FRMER
Sbjct: 576 DVYLMFRRFHAEELLGYSGVDDSTQVKLLIGSAESVQFRGR-----CLGKNGLGKFRMER 630
Query: 1382 GVENWIVNCTCGAKDDDGERMLACDACGIWQHTRCARIDDRDVVPESFKCLKCR 1543
G E W V+C CGAKDDDGERMLACD CG+WQHTRC+ I D D VP F CL+CR
Sbjct: 631 GTEGWTVDCCCGAKDDDGERMLACDVCGVWQHTRCSGIPDSDSVPAKFVCLRCR 684