BLASTX nr result

ID: Cimicifuga21_contig00006193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006193
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867520.1| hypothetical protein ARALYDRAFT_492082 [Arab...   186   3e-45
sp|Q9SQF4.1|SUI1_BRAOL RecName: Full=Protein translation factor ...   186   4e-45
ref|NP_194443.1| protein translation factor SUI1-1 [Arabidopsis ...   186   4e-45
gb|ADV04053.1| eukaryotic translation initiation factor 2 [Hevea...   184   1e-44
ref|XP_002281891.1| PREDICTED: protein translation factor SUI1 h...   184   1e-44

>ref|XP_002867520.1| hypothetical protein ARALYDRAFT_492082 [Arabidopsis lyrata subsp.
           lyrata] gi|297313356|gb|EFH43779.1| hypothetical protein
           ARALYDRAFT_492082 [Arabidopsis lyrata subsp. lyrata]
          Length = 113

 Score =  186 bits (472), Expect = 3e-45
 Identities = 89/97 (91%), Positives = 96/97 (98%)
 Frame = +1

Query: 364 MSELDTQLPTAFDPFAEANAEDSGAGTKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 543
           MSELD+Q+PTAFDPFA+ANAEDSGAGTKEYVH+R+QQRNGRKSLTTVQGLKKE+SY+KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 544 KDLKKEFCCNGTVVDDSELGQVIQLQGDQRKNVSTFL 654
           KDLKKEFCCNGTVV DSELGQVIQLQGDQRKNVSTFL
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFL 97


>sp|Q9SQF4.1|SUI1_BRAOL RecName: Full=Protein translation factor SUI1 homolog; AltName:
           Full=Translation initiation factor nps45
           gi|6165638|gb|AAF04624.1|AF098672_1 translation
           initiation factor nps45 [Brassica oleracea]
          Length = 113

 Score =  186 bits (471), Expect = 4e-45
 Identities = 89/97 (91%), Positives = 95/97 (97%)
 Frame = +1

Query: 364 MSELDTQLPTAFDPFAEANAEDSGAGTKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 543
           MSELD+Q+PTAFDPFA+ANAEDSGAGTKEYVH+R+QQRNGRKSLTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 544 KDLKKEFCCNGTVVDDSELGQVIQLQGDQRKNVSTFL 654
           KDLKKEFCCNGTVV DSELGQVIQLQGDQRKNVSTFL
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFL 97


>ref|NP_194443.1| protein translation factor SUI1-1 [Arabidopsis thaliana]
           gi|2507421|sp|P41568.2|SUI11_ARATH RecName: Full=Protein
           translation factor SUI1 homolog 1
           gi|1800277|gb|AAB68033.1| translation initiation factor
           [Arabidopsis thaliana] gi|4490709|emb|CAB38843.1|
           translation initiation factor [Arabidopsis thaliana]
           gi|7269566|emb|CAB79568.1| translation initiation factor
           [Arabidopsis thaliana] gi|14335110|gb|AAK59834.1|
           AT4g27130/T24A18_80 [Arabidopsis thaliana]
           gi|16974517|gb|AAL31168.1| AT4g27130/T24A18_80
           [Arabidopsis thaliana] gi|21593860|gb|AAM65827.1|
           translation initiation factor [Arabidopsis thaliana]
           gi|332659905|gb|AEE85305.1| protein translation factor
           SUI1-1 [Arabidopsis thaliana]
          Length = 113

 Score =  186 bits (471), Expect = 4e-45
 Identities = 89/97 (91%), Positives = 95/97 (97%)
 Frame = +1

Query: 364 MSELDTQLPTAFDPFAEANAEDSGAGTKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 543
           MSELD+Q+PTAFDPFA+ANAEDSGAGTKEYVH+R+QQRNGRKSLTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 544 KDLKKEFCCNGTVVDDSELGQVIQLQGDQRKNVSTFL 654
           KDLKKEFCCNGTVV DSELGQVIQLQGDQRKNVSTFL
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFL 97


>gb|ADV04053.1| eukaryotic translation initiation factor 2 [Hevea brasiliensis]
          Length = 113

 Score =  184 bits (468), Expect = 1e-44
 Identities = 89/97 (91%), Positives = 93/97 (95%)
 Frame = +1

Query: 364 MSELDTQLPTAFDPFAEANAEDSGAGTKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 543
           MSEL+TQ+PT FDPFA+ANAEDSGAG KEYVH+RIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSELETQIPTTFDPFADANAEDSGAGAKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 544 KDLKKEFCCNGTVVDDSELGQVIQLQGDQRKNVSTFL 654
           KDLKKEFCCNGTVV D ELGQVIQLQGDQRKNVSTFL
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFL 97


>ref|XP_002281891.1| PREDICTED: protein translation factor SUI1 homolog isoform 2 [Vitis
           vinifera] gi|225461085|ref|XP_002281872.1| PREDICTED:
           protein translation factor SUI1 homolog isoform 1 [Vitis
           vinifera] gi|297735962|emb|CBI23936.3| unnamed protein
           product [Vitis vinifera]
          Length = 113

 Score =  184 bits (468), Expect = 1e-44
 Identities = 89/97 (91%), Positives = 94/97 (96%)
 Frame = +1

Query: 364 MSELDTQLPTAFDPFAEANAEDSGAGTKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 543
           MSELD Q+PTAFDPFAEANAEDSGAG+K+YVH+RIQQRNGRKSLTTVQGL+KEFSYNKIL
Sbjct: 1   MSELDIQIPTAFDPFAEANAEDSGAGSKDYVHIRIQQRNGRKSLTTVQGLRKEFSYNKIL 60

Query: 544 KDLKKEFCCNGTVVDDSELGQVIQLQGDQRKNVSTFL 654
           KDLKKEFCCNGTVV D ELGQVIQLQGDQRKNVSTFL
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFL 97


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