BLASTX nr result

ID: Cimicifuga21_contig00006162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006162
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282529.1| PREDICTED: receptor protein kinase-like prot...   338   1e-90
gb|AAM65927.1| unknown [Arabidopsis thaliana]                         321   1e-85
ref|XP_002867128.1| hydrolase [Arabidopsis lyrata subsp. lyrata]...   321   2e-85
ref|NP_567960.1| uncharacterized protein [Arabidopsis thaliana] ...   319   6e-85
pdb|2APJ|A Chain A, X-Ray Structure Of Protein From Arabidopsis ...   317   2e-84

>ref|XP_002282529.1| PREDICTED: receptor protein kinase-like protein At4g34220-like [Vitis
            vinifera]
          Length = 1004

 Score =  338 bits (867), Expect = 1e-90
 Identities = 175/252 (69%), Positives = 198/252 (78%)
 Frame = +1

Query: 55   ASDDTETPINNNKQIFILSGQSNMAGRGGLVLTHPKKWDGFLPPECQPDPKILRFNAKLH 234
            AS +  T    +KQIFILSGQSNMAGRGG+   H  KWDG +PPEC PD  ILR NA+LH
Sbjct: 756  ASSNQSTENRPSKQIFILSGQSNMAGRGGVNGHH--KWDGVVPPECSPDSSILRLNAQLH 813

Query: 235  WEEAHEPLHADIDAKKTCGVGPGLVFANSVRAQDPTVDVVGLVPCAVGGTAIKEWERGTH 414
            WE A EPLHADID KK CGVGPG+ FAN+VR +   V V+GLVPCAVGGTAIKEW RG  
Sbjct: 814  WESAREPLHADIDTKKACGVGPGMSFANAVRKR---VGVLGLVPCAVGGTAIKEWARGQP 870

Query: 415  LYENMVKRARESIKQGGQIKALLWYQGESDTSSRHVAESYGANMERFIRDVRADLRSPSL 594
            LYENMV RA+ES+K GG+IKALLWYQGESDTSS + A+SY  NME  I++VR DL SPSL
Sbjct: 871  LYENMVNRAKESVKSGGEIKALLWYQGESDTSSYNDAKSYKDNMESLIQNVRQDLGSPSL 930

Query: 595  PIIQVAIASGDGAYAEKVREAQLGMEVADVVCVDAKGLELQGDNLHLTTEAQVKLGTMLA 774
            PIIQVAIASGD  Y E+VREAQ  ++  +VVCVDAKGL L+ D+LHLTTEAQV+LG MLA
Sbjct: 931  PIIQVAIASGDSKYMERVREAQKEIDFPNVVCVDAKGLPLKEDHLHLTTEAQVRLGQMLA 990

Query: 775  DAYLKNFASSSA 810
            DAYL NFA   A
Sbjct: 991  DAYLANFAPPPA 1002


>gb|AAM65927.1| unknown [Arabidopsis thaliana]
          Length = 260

 Score =  321 bits (823), Expect = 1e-85
 Identities = 166/248 (66%), Positives = 192/248 (77%), Gaps = 4/248 (1%)
 Frame = +1

Query: 64  DTETPINNNKQIFILSGQSNMAGRGGLVLTHPKK---WDGFLPPECQPDPKILRFNAKLH 234
           + ++PI  N QIFILSGQSNMAGRGG+V  H      WD  LPPEC P+  ILR +A L 
Sbjct: 14  EIQSPIPPN-QIFILSGQSNMAGRGGVVKDHHHNRWVWDKILPPECAPNSSILRLSADLR 72

Query: 235 WEEAHEPLHADIDAKKTCGVGPGLVFANSVRAQDPTVD-VVGLVPCAVGGTAIKEWERGT 411
           WEEAHEPLH DID  K CGVGPG+ FAN+V+ +  T   V+GLVPCA GGTAIKEWERG+
Sbjct: 73  WEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRVETDSAVIGLVPCASGGTAIKEWERGS 132

Query: 412 HLYENMVKRARESIKQGGQIKALLWYQGESDTSSRHVAESYGANMERFIRDVRADLRSPS 591
           HLYE MVKR  ES K GG+IKA+LWYQGESD    H AESYG NM+R I+++R DL  PS
Sbjct: 133 HLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPS 192

Query: 592 LPIIQVAIASGDGAYAEKVREAQLGMEVADVVCVDAKGLELQGDNLHLTTEAQVKLGTML 771
           LPIIQVAIASG G Y +KVREAQLG+++++VVCVDAKGL L+ DNLHLTTEAQV+LG  L
Sbjct: 193 LPIIQVAIASG-GGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSL 251

Query: 772 ADAYLKNF 795
           A AYL NF
Sbjct: 252 AQAYLSNF 259


>ref|XP_002867128.1| hydrolase [Arabidopsis lyrata subsp. lyrata]
           gi|297312964|gb|EFH43387.1| hydrolase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 262

 Score =  321 bits (822), Expect = 2e-85
 Identities = 164/248 (66%), Positives = 193/248 (77%), Gaps = 4/248 (1%)
 Frame = +1

Query: 64  DTETPINNNKQIFILSGQSNMAGRGGLVLTHPKK---WDGFLPPECQPDPKILRFNAKLH 234
           + ++PI  N QIFILSGQSNMAGRGG+V  H      WD  +PPEC P+  ILR +A L 
Sbjct: 16  EIQSPIPPN-QIFILSGQSNMAGRGGVVKDHHHNRWVWDKIVPPECAPNSSILRLSADLR 74

Query: 235 WEEAHEPLHADIDAKKTCGVGPGLVFANSVRAQDPTVD-VVGLVPCAVGGTAIKEWERGT 411
           WEEAHEPLH DID  K CG+GPG+ FAN+V+ +  T   V+GLVPCA GGTAIK+WERGT
Sbjct: 75  WEEAHEPLHVDIDTGKVCGIGPGMPFANAVKNRLKTDSAVIGLVPCAAGGTAIKQWERGT 134

Query: 412 HLYENMVKRARESIKQGGQIKALLWYQGESDTSSRHVAESYGANMERFIRDVRADLRSPS 591
           HLYE MVKR  ES K GG+IKA+LWYQGESD    H AESYG+NM+R I+++R DL  PS
Sbjct: 135 HLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGSNMDRLIKNLRHDLNLPS 194

Query: 592 LPIIQVAIASGDGAYAEKVREAQLGMEVADVVCVDAKGLELQGDNLHLTTEAQVKLGTML 771
           LPIIQVAIASG G Y +KVREAQLG+++++VVCVDAKGL L+ DNLHLTTEAQV+LG  L
Sbjct: 195 LPIIQVAIASG-GGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSL 253

Query: 772 ADAYLKNF 795
           A AYL NF
Sbjct: 254 AQAYLSNF 261


>ref|NP_567960.1| uncharacterized protein [Arabidopsis thaliana]
           gi|30689964|ref|NP_849493.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|109940187|sp|Q8L9J9.2|CAES_ARATH RecName:
           Full=Probable carbohydrate esterase At4g34215
           gi|332660941|gb|AEE86341.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332660942|gb|AEE86342.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 260

 Score =  319 bits (818), Expect = 6e-85
 Identities = 165/248 (66%), Positives = 191/248 (77%), Gaps = 4/248 (1%)
 Frame = +1

Query: 64  DTETPINNNKQIFILSGQSNMAGRGGLVLTHPKK---WDGFLPPECQPDPKILRFNAKLH 234
           + ++PI  N QIFILSGQSNMAGRGG+   H      WD  LPPEC P+  ILR +A L 
Sbjct: 14  EIQSPIPPN-QIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLR 72

Query: 235 WEEAHEPLHADIDAKKTCGVGPGLVFANSVRAQDPTVD-VVGLVPCAVGGTAIKEWERGT 411
           WEEAHEPLH DID  K CGVGPG+ FAN+V+ +  T   V+GLVPCA GGTAIKEWERG+
Sbjct: 73  WEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGS 132

Query: 412 HLYENMVKRARESIKQGGQIKALLWYQGESDTSSRHVAESYGANMERFIRDVRADLRSPS 591
           HLYE MVKR  ES K GG+IKA+LWYQGESD    H AESYG NM+R I+++R DL  PS
Sbjct: 133 HLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPS 192

Query: 592 LPIIQVAIASGDGAYAEKVREAQLGMEVADVVCVDAKGLELQGDNLHLTTEAQVKLGTML 771
           LPIIQVAIASG G Y +KVREAQLG+++++VVCVDAKGL L+ DNLHLTTEAQV+LG  L
Sbjct: 193 LPIIQVAIASG-GGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSL 251

Query: 772 ADAYLKNF 795
           A AYL NF
Sbjct: 252 AQAYLSNF 259


>pdb|2APJ|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana
           At4g34215 At 1.6 Angstrom Resolution
           gi|75766301|pdb|2APJ|B Chain B, X-Ray Structure Of
           Protein From Arabidopsis Thaliana At4g34215 At 1.6
           Angstrom Resolution gi|75766302|pdb|2APJ|C Chain C,
           X-Ray Structure Of Protein From Arabidopsis Thaliana
           At4g34215 At 1.6 Angstrom Resolution
           gi|75766303|pdb|2APJ|D Chain D, X-Ray Structure Of
           Protein From Arabidopsis Thaliana At4g34215 At 1.6
           Angstrom Resolution
          Length = 260

 Score =  317 bits (813), Expect = 2e-84
 Identities = 164/248 (66%), Positives = 190/248 (76%), Gaps = 4/248 (1%)
 Frame = +1

Query: 64  DTETPINNNKQIFILSGQSNMAGRGGLVLTHPKK---WDGFLPPECQPDPKILRFNAKLH 234
           + ++PI  N QIFILSGQ NMAGRGG+   H      WD  LPPEC P+  ILR +A L 
Sbjct: 14  EIQSPIPPN-QIFILSGQXNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLR 72

Query: 235 WEEAHEPLHADIDAKKTCGVGPGLVFANSVRAQDPTVD-VVGLVPCAVGGTAIKEWERGT 411
           WEEAHEPLH DID  K CGVGPG+ FAN+V+ +  T   V+GLVPCA GGTAIKEWERG+
Sbjct: 73  WEEAHEPLHVDIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGS 132

Query: 412 HLYENMVKRARESIKQGGQIKALLWYQGESDTSSRHVAESYGANMERFIRDVRADLRSPS 591
           HLYE MVKR  ES K GG+IKA+LWYQGESD    H AESYG NM+R I+++R DL  PS
Sbjct: 133 HLYERMVKRTEESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPS 192

Query: 592 LPIIQVAIASGDGAYAEKVREAQLGMEVADVVCVDAKGLELQGDNLHLTTEAQVKLGTML 771
           LPIIQVAIASG G Y +KVREAQLG+++++VVCVDAKGL L+ DNLHLTTEAQV+LG  L
Sbjct: 193 LPIIQVAIASG-GGYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSL 251

Query: 772 ADAYLKNF 795
           A AYL NF
Sbjct: 252 AQAYLSNF 259


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