BLASTX nr result

ID: Cimicifuga21_contig00006156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006156
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281739.1| PREDICTED: 50S ribosomal protein L17 [Vitis ...   261   2e-67
ref|XP_002310514.1| predicted protein [Populus trichocarpa] gi|2...   260   2e-67
ref|XP_002307023.1| predicted protein [Populus trichocarpa] gi|2...   259   7e-67
ref|XP_002517236.1| ribosomal protein L17, putative [Ricinus com...   256   4e-66
ref|XP_002873421.1| ribosomal protein L17 family protein [Arabid...   251   1e-64

>ref|XP_002281739.1| PREDICTED: 50S ribosomal protein L17 [Vitis vinifera]
           gi|296088573|emb|CBI37564.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  261 bits (666), Expect = 2e-67
 Identities = 132/160 (82%), Positives = 139/160 (86%)
 Frame = -2

Query: 737 MTKMRKLNRPTGHRISMLRTMVSQLVKHERVETTVAKAKEIRRLADNMVQLGKEGTLCAA 558
           MTK RKL RPTGHR+SMLRTMVSQLVKHER+ETTVAKAKEIRRLADNMVQLGKEG+LCAA
Sbjct: 1   MTKFRKLGRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEIRRLADNMVQLGKEGSLCAA 60

Query: 557 RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRVLRTRIRVGDAAPMAYIEFVDRENELX 378
           RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTR+LRTRIRVGDAAPMAYIEF+DRENEL 
Sbjct: 61  RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFIDRENELR 120

Query: 377 XXXXXXXXXXXXXPMDPWTRSRLTKQMAPPKEDKSESSKI 258
                        P+DPWTRSRL KQ APPKEDKS   +I
Sbjct: 121 QSKPATPQPPQRVPLDPWTRSRLCKQFAPPKEDKSSDPEI 160


>ref|XP_002310514.1| predicted protein [Populus trichocarpa] gi|222853417|gb|EEE90964.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  260 bits (665), Expect = 2e-67
 Identities = 130/160 (81%), Positives = 141/160 (88%)
 Frame = -2

Query: 737 MTKMRKLNRPTGHRISMLRTMVSQLVKHERVETTVAKAKEIRRLADNMVQLGKEGTLCAA 558
           MTK RKLNRPTGHR+SMLRTMVSQL+KHER+ETTVAKAKEIRRLADNMVQLGKEG+LCA+
Sbjct: 1   MTKFRKLNRPTGHRMSMLRTMVSQLIKHERIETTVAKAKEIRRLADNMVQLGKEGSLCAS 60

Query: 557 RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRVLRTRIRVGDAAPMAYIEFVDRENELX 378
           RRAAAFVRGDDVIHKLF+ELAYRYKDRAGGYTR+LRTRIRVGDAAPMAYIEF+DRENEL 
Sbjct: 61  RRAAAFVRGDDVIHKLFSELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELR 120

Query: 377 XXXXXXXXXXXXXPMDPWTRSRLTKQMAPPKEDKSESSKI 258
                        PMDPWTRSRLT+Q APPKE+KS   +I
Sbjct: 121 QSKPPTPQPPQRAPMDPWTRSRLTRQCAPPKEEKSSDPEI 160


>ref|XP_002307023.1| predicted protein [Populus trichocarpa] gi|222856472|gb|EEE94019.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  259 bits (661), Expect = 7e-67
 Identities = 128/160 (80%), Positives = 141/160 (88%)
 Frame = -2

Query: 737 MTKMRKLNRPTGHRISMLRTMVSQLVKHERVETTVAKAKEIRRLADNMVQLGKEGTLCAA 558
           MTK RKLNRPTGHR+SMLRT+VSQL+KHER+ETTVAKAKEIRRLADNMVQLGKEG+LCAA
Sbjct: 1   MTKFRKLNRPTGHRMSMLRTLVSQLIKHERIETTVAKAKEIRRLADNMVQLGKEGSLCAA 60

Query: 557 RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRVLRTRIRVGDAAPMAYIEFVDRENELX 378
           RRAAAFVRGDDVIHKLF+E+AYRYKDRAGGYTR+LRTRIRVGDAAPMAYIEF+DRENEL 
Sbjct: 61  RRAAAFVRGDDVIHKLFSEMAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELR 120

Query: 377 XXXXXXXXXXXXXPMDPWTRSRLTKQMAPPKEDKSESSKI 258
                        P+DPWTRSRLT+Q APPKE+KS   +I
Sbjct: 121 QSKPPTPQPPQRAPLDPWTRSRLTRQFAPPKEEKSSDPEI 160


>ref|XP_002517236.1| ribosomal protein L17, putative [Ricinus communis]
           gi|223543607|gb|EEF45136.1| ribosomal protein L17,
           putative [Ricinus communis]
          Length = 160

 Score =  256 bits (654), Expect = 4e-66
 Identities = 127/160 (79%), Positives = 140/160 (87%)
 Frame = -2

Query: 737 MTKMRKLNRPTGHRISMLRTMVSQLVKHERVETTVAKAKEIRRLADNMVQLGKEGTLCAA 558
           MTK RKL+RPTGHR+S+LRTMVSQLVKHER+ETT+AKAKEIRRLADNMVQLGKEG+LCAA
Sbjct: 1   MTKFRKLSRPTGHRMSLLRTMVSQLVKHERIETTIAKAKEIRRLADNMVQLGKEGSLCAA 60

Query: 557 RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRVLRTRIRVGDAAPMAYIEFVDRENELX 378
           RRAAAFVRGDDV+HKLFTELAYRYKDR GGYTR+LRTRIRVGDAAPMAYIEF+DRENEL 
Sbjct: 61  RRAAAFVRGDDVLHKLFTELAYRYKDREGGYTRLLRTRIRVGDAAPMAYIEFIDRENELR 120

Query: 377 XXXXXXXXXXXXXPMDPWTRSRLTKQMAPPKEDKSESSKI 258
                        P+DPWTRSRL+KQ APPKE+KS   +I
Sbjct: 121 KSKPPTPQPPQRDPLDPWTRSRLSKQFAPPKEEKSSEPEI 160


>ref|XP_002873421.1| ribosomal protein L17 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297319258|gb|EFH49680.1| ribosomal protein
           L17 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 160

 Score =  251 bits (642), Expect = 1e-64
 Identities = 125/160 (78%), Positives = 136/160 (85%)
 Frame = -2

Query: 737 MTKMRKLNRPTGHRISMLRTMVSQLVKHERVETTVAKAKEIRRLADNMVQLGKEGTLCAA 558
           MTK RKL RP GHR+SMLRTMVSQLVKHER+ETTV KAKE+RRLADNMVQLGKEGTL AA
Sbjct: 1   MTKFRKLGRPAGHRMSMLRTMVSQLVKHERIETTVTKAKEVRRLADNMVQLGKEGTLAAA 60

Query: 557 RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRVLRTRIRVGDAAPMAYIEFVDRENELX 378
           RRAA FVRGDDV+HK+FTELAYRYKDRAGGYTR+LRTRIRVGDAAPMAYIEF+DRENEL 
Sbjct: 61  RRAAGFVRGDDVLHKIFTELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELR 120

Query: 377 XXXXXXXXXXXXXPMDPWTRSRLTKQMAPPKEDKSESSKI 258
                        P+DPW RSRLTKQ APPKE+KS  S++
Sbjct: 121 QSKPATPQPPQRVPLDPWERSRLTKQFAPPKEEKSSDSEL 160


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