BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006144
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324518.1| predicted protein [Populus trichocarpa] gi|2...   161   2e-37
ref|XP_002267813.1| PREDICTED: 50S ribosomal protein L35, chloro...   161   2e-37
ref|XP_002264584.1| PREDICTED: 50S ribosomal protein L35, chloro...   160   4e-37
gb|ABK93832.1| unknown [Populus trichocarpa]                          159   6e-37
ref|XP_004146668.1| PREDICTED: 50S ribosomal protein L35, chloro...   159   7e-37

>ref|XP_002324518.1| predicted protein [Populus trichocarpa] gi|222865952|gb|EEF03083.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score =  161 bits (408), Expect = 2e-37
 Identities = 95/150 (63%), Positives = 105/150 (70%), Gaps = 6/150 (4%)
 Frame = +2

Query: 17  MASATMMHCXXXXXXXXXXXVQTSNG-VRLGLCLKKTPSLNLSSSQHISAFHPVLPTKLP 193
           MAS T++              + S G  +L   +K   SL LSS ++IS    + P K P
Sbjct: 1   MASLTVLSFNLKSCPLHSFSTRVSYGSAQLAPLIKVNSSLRLSSCRNISGSRSLSPLK-P 59

Query: 194 TSQTA-----SSFTVFAAKGYKMKTHKASAKRFRVTGNGKIVRRRAGKQHLLAKKNTKRK 358
            S T+      S TVFAAKGYKMKTHKASAKRFRVTG GKIVRRRAGKQHLLAKKNTKRK
Sbjct: 60  CSITSLTQRFQSLTVFAAKGYKMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRK 119

Query: 359 NRLSKMHPVSKSDYDNVIGALPYLKVNRKA 448
            RLSKMHPVS+SDYDNVIGALPYLKVNRKA
Sbjct: 120 LRLSKMHPVSRSDYDNVIGALPYLKVNRKA 149


>ref|XP_002267813.1| PREDICTED: 50S ribosomal protein L35, chloroplastic [Vitis
           vinifera] gi|147785813|emb|CAN77631.1| hypothetical
           protein VITISV_001803 [Vitis vinifera]
           gi|147799145|emb|CAN63703.1| hypothetical protein
           VITISV_039205 [Vitis vinifera]
          Length = 153

 Score =  161 bits (408), Expect = 2e-37
 Identities = 84/112 (75%), Positives = 93/112 (83%), Gaps = 5/112 (4%)
 Frame = +2

Query: 128 SLNLSSSQHISAFHPVLPTK-----LPTSQTASSFTVFAAKGYKMKTHKASAKRFRVTGN 292
           SL LSSS++IS F P+LP +      P+    SS TV +AKGYKMKTHKASAKRFRVTG 
Sbjct: 41  SLKLSSSRNISGFAPILPLRHSTLNSPSPSQPSSLTVVSAKGYKMKTHKASAKRFRVTGR 100

Query: 293 GKIVRRRAGKQHLLAKKNTKRKNRLSKMHPVSKSDYDNVIGALPYLKVNRKA 448
           GKIVRRRAGKQHLLAKKN KR+ RLSKMHPVS+SDYDNVIGALPYLKVNR+A
Sbjct: 101 GKIVRRRAGKQHLLAKKNAKRRLRLSKMHPVSRSDYDNVIGALPYLKVNREA 152


>ref|XP_002264584.1| PREDICTED: 50S ribosomal protein L35, chloroplastic [Vitis
           vinifera]
          Length = 153

 Score =  160 bits (404), Expect = 4e-37
 Identities = 83/111 (74%), Positives = 92/111 (82%), Gaps = 5/111 (4%)
 Frame = +2

Query: 128 SLNLSSSQHISAFHPVLPTK-----LPTSQTASSFTVFAAKGYKMKTHKASAKRFRVTGN 292
           SL LSSS++IS F P+LP +      P+    SS TV +AKGYKMKTHKASAKRFRVTG 
Sbjct: 41  SLKLSSSRNISGFAPILPLRHSTLNSPSPSQPSSLTVVSAKGYKMKTHKASAKRFRVTGR 100

Query: 293 GKIVRRRAGKQHLLAKKNTKRKNRLSKMHPVSKSDYDNVIGALPYLKVNRK 445
           GKIVRRRAGKQHLLAKKN KR+ RLSKMHPVS+SDYDNVIGALPYLKVNR+
Sbjct: 101 GKIVRRRAGKQHLLAKKNAKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRE 151


>gb|ABK93832.1| unknown [Populus trichocarpa]
          Length = 150

 Score =  159 bits (403), Expect = 6e-37
 Identities = 95/150 (63%), Positives = 104/150 (69%), Gaps = 6/150 (4%)
 Frame = +2

Query: 17  MASATMMHCXXXXXXXXXXXVQTSNG-VRLGLCLKKTPSLNLSSSQHISAFHPVLPTKLP 193
           MAS T++              + S G  +L    K   SL LSS ++IS    + P K P
Sbjct: 1   MASLTVLSFNLKSCPLHSFSTRVSYGSAQLAPLNKVNSSLRLSSCRNISGSRSLSPLK-P 59

Query: 194 TSQTA-----SSFTVFAAKGYKMKTHKASAKRFRVTGNGKIVRRRAGKQHLLAKKNTKRK 358
            S T+      S TVFAAKGYKMKTHKASAKRFRVTG GKIVRRRAGKQHLLAKKNTKRK
Sbjct: 60  CSITSLTQRFQSLTVFAAKGYKMKTHKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRK 119

Query: 359 NRLSKMHPVSKSDYDNVIGALPYLKVNRKA 448
            RLSKMHPVS+SDYDNVIGALPYLKVNRKA
Sbjct: 120 LRLSKMHPVSRSDYDNVIGALPYLKVNRKA 149


>ref|XP_004146668.1| PREDICTED: 50S ribosomal protein L35, chloroplastic-like [Cucumis
           sativus] gi|449503151|ref|XP_004161859.1| PREDICTED: 50S
           ribosomal protein L35, chloroplastic-like [Cucumis
           sativus]
          Length = 151

 Score =  159 bits (402), Expect = 7e-37
 Identities = 86/116 (74%), Positives = 94/116 (81%), Gaps = 4/116 (3%)
 Frame = +2

Query: 113 LKKTPSLNLSSSQHISAF---HPVLPTKL-PTSQTASSFTVFAAKGYKMKTHKASAKRFR 280
           + K  SL LSSS +IS F       P+ + PTSQ  + FTVFAAKGYKMKTHKASAKRFR
Sbjct: 35  VNKVNSLKLSSSHNISGFGFNSLQKPSHISPTSQIRTPFTVFAAKGYKMKTHKASAKRFR 94

Query: 281 VTGNGKIVRRRAGKQHLLAKKNTKRKNRLSKMHPVSKSDYDNVIGALPYLKVNRKA 448
           VTG GKIVRRRAGKQHLL KKN KR+ RLSKMHPVS+SDYDNVIGALPYLKVNR+A
Sbjct: 95  VTGRGKIVRRRAGKQHLLCKKNAKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQA 150