BLASTX nr result

ID: Cimicifuga21_contig00006129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006129
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532540.1| syntaxin, plant, putative [Ricinus communis]...   115   3e-24
ref|XP_002879585.1| yellow-leaf-specific gene 9 [Arabidopsis lyr...   115   4e-24
ref|NP_181142.1| late embryogenesis abundant hydroxyproline-rich...   114   8e-24
dbj|BAG15858.1| harpin-induced protein [Bruguiera gymnorhiza]         112   4e-23
dbj|BAD22534.1| harpin inducing protein 1-like 18 [Nicotiana tab...   108   3e-22

>ref|XP_002532540.1| syntaxin, plant, putative [Ricinus communis]
           gi|223527729|gb|EEF29834.1| syntaxin, plant, putative
           [Ricinus communis]
          Length = 219

 Score =  115 bits (289), Expect = 3e-24
 Identities = 61/119 (51%), Positives = 78/119 (65%), Gaps = 4/119 (3%)
 Frame = -1

Query: 347 KEVPLNGAYYGPSIPPQQSHH-PRRSR---GYCVLSTFXXXXXXXXXXXXXXXXIFWLVV 180
           K+  LNGAYYGP+IPP QS+H P RS    G C+LS                  IFWLVV
Sbjct: 4   KQAQLNGAYYGPAIPPPQSYHRPGRSGCGCGCCLLSCLLKIIITIAVVLGLAVLIFWLVV 63

Query: 179 RPREVKFYVVSADLKQFDLTNPNILNYNLSLNIAVRNPNKRIGVYYDELEAIASYKGER 3
           RP +VKF+V  A+L +F++ N N L+YNL+LNI VRNPNK+IG+YYD +EA   Y+ +R
Sbjct: 64  RPNKVKFHVTEANLSEFNINN-NTLHYNLALNITVRNPNKKIGIYYDRIEARGKYEDQR 121


>ref|XP_002879585.1| yellow-leaf-specific gene 9 [Arabidopsis lyrata subsp. lyrata]
           gi|297325424|gb|EFH55844.1| yellow-leaf-specific gene 9
           [Arabidopsis lyrata subsp. lyrata]
          Length = 227

 Score =  115 bits (288), Expect = 4e-24
 Identities = 62/120 (51%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
 Frame = -1

Query: 344 EVPLNGAYYGPSIPPQ--QSHHPR---RSRGYCVLSTFXXXXXXXXXXXXXXXXIFWLVV 180
           E PLNGA+YGPS+PP   + ++ R   R  G C+LS F                IFWL+V
Sbjct: 4   EQPLNGAFYGPSVPPPAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIV 63

Query: 179 RPREVKFYVVSADLKQFDLTNP-NILNYNLSLNIAVRNPNKRIGVYYDELEAIASYKGER 3
           RPR +KF+V  A L +FD T+P NIL YNL+L + VRNPNKRIGVYYD +EA A Y+G+R
Sbjct: 64  RPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGVYYDRIEAHAYYEGKR 123


>ref|NP_181142.1| late embryogenesis abundant hydroxyproline-rich glycoprotein
           [Arabidopsis thaliana] gi|4510371|gb|AAD21459.1| similar
           to harpin-induced protein hin1 from tobacco [Arabidopsis
           thaliana] gi|13122296|dbj|BAB32889.1| hin1 homolog
           [Arabidopsis thaliana] gi|21554788|gb|AAM63691.1|
           similar to harpin-induced protein hin1 from tobacco
           [Arabidopsis thaliana] gi|27754489|gb|AAO22692.1|
           putative harpin-induced protein hin1 [Arabidopsis
           thaliana] gi|28393973|gb|AAO42394.1| putative
           harpin-induced protein hin1 [Arabidopsis thaliana]
           gi|330254091|gb|AEC09185.1| late embryogenesis abundant
           hydroxyproline-rich glycoprotein [Arabidopsis thaliana]
          Length = 227

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/120 (50%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
 Frame = -1

Query: 344 EVPLNGAYYGPSIPPQ--QSHHPR---RSRGYCVLSTFXXXXXXXXXXXXXXXXIFWLVV 180
           E PLNGA+YGPS+PP   + ++ R   R  G C+LS F                IFWL+V
Sbjct: 4   EQPLNGAFYGPSVPPPAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIV 63

Query: 179 RPREVKFYVVSADLKQFDLTNP-NILNYNLSLNIAVRNPNKRIGVYYDELEAIASYKGER 3
           RPR +KF+V  A L +FD T+P NIL YNL+L + VRNPNKRIG+YYD +EA A Y+G+R
Sbjct: 64  RPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKR 123


>dbj|BAG15858.1| harpin-induced protein [Bruguiera gymnorhiza]
          Length = 200

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/120 (45%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
 Frame = -1

Query: 347 KEVPLNGAYYGPSIPPQQSHHPRRSR-----GYCVLSTFXXXXXXXXXXXXXXXXIFWLV 183
           K+  LNGAYYGP+IPP +++H    R     G C+LS                  + WLV
Sbjct: 4   KQPHLNGAYYGPAIPPPKNYHRPGGRSGSGCGCCLLSFLFKLIITAVVIIGIAILVIWLV 63

Query: 182 VRPREVKFYVVSADLKQFDLTNPNILNYNLSLNIAVRNPNKRIGVYYDELEAIASYKGER 3
           +RP ++KF+V  A L QF++T  N L YNL+LN+ VRNPNKRIG+YYD+++A A Y+G R
Sbjct: 64  LRPNKIKFHVTDATLTQFNITANNTLQYNLALNLTVRNPNKRIGIYYDKIDAAAFYEGNR 123


>dbj|BAD22534.1| harpin inducing protein 1-like 18 [Nicotiana tabacum]
          Length = 229

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/125 (46%), Positives = 73/125 (58%), Gaps = 11/125 (8%)
 Frame = -1

Query: 344 EVPLNGAYYGPSIPPQQSHHPRRSRGY----------CVLSTFXXXXXXXXXXXXXXXXI 195
           E  LNGAYYGPSIPP    + R  RG           C+ + F                +
Sbjct: 3   ESNLNGAYYGPSIPPPAKSYHRHGRGSSCNPCSCLFGCLCNCFFKIIFTLLIILGVIALV 62

Query: 194 FWLVVRPREVKFYVVSADLKQFDLTNPN-ILNYNLSLNIAVRNPNKRIGVYYDELEAIAS 18
            WLV+RP +VKFYV  A L QFDL+N N  + Y+L+LN+ +RNPNKRIG+YYD +EA A 
Sbjct: 63  LWLVLRPNKVKFYVTDATLTQFDLSNTNNTIFYDLALNMTIRNPNKRIGIYYDSIEARAM 122

Query: 17  YKGER 3
           Y+GER
Sbjct: 123 YQGER 127


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