BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006121
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...    89   2e-15
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]    89   2e-15
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...    89   2e-15
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...    89   2e-15
emb|CBI36671.3| unnamed protein product [Vitis vinifera]               89   2e-15

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
           [Vitis vinifera]
          Length = 2177

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 47/106 (44%), Positives = 72/106 (67%), Gaps = 5/106 (4%)
 Frame = -2

Query: 800 ERGFYQPSTEDTWEAYQALISIVEAQSRKNLPSAVMCGTADEVLAVLKSKNIINPWDKKR 621
           E G YQP T++T  AY+A++S+++ Q     P  ++ G ADE+LAVLK++ + NP DKK+
Sbjct: 109 EEGVYQPKTKETRAAYEAMLSVIQ-QQLGGQPLNIVSGAADEILAVLKNETVKNP-DKKK 166

Query: 620 EIEKILNPVPHLIFNQMVSTADLITDYY-----VVTRASNTDDRVE 498
           EIE++LNP+P+ IF+Q+VS   LITD+          A+N DD ++
Sbjct: 167 EIERLLNPIPNHIFDQLVSIGRLITDFQDGGDAAGPTAANGDDALD 212


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 47/106 (44%), Positives = 72/106 (67%), Gaps = 5/106 (4%)
 Frame = -2

Query: 800 ERGFYQPSTEDTWEAYQALISIVEAQSRKNLPSAVMCGTADEVLAVLKSKNIINPWDKKR 621
           E G YQP T++T  AY+A++S+++ Q     P  ++ G ADE+LAVLK++ + NP DKK+
Sbjct: 109 EEGVYQPKTKETRAAYEAMLSVIQ-QQLGGQPLNIVSGAADEILAVLKNETVKNP-DKKK 166

Query: 620 EIEKILNPVPHLIFNQMVSTADLITDYY-----VVTRASNTDDRVE 498
           EIE++LNP+P+ IF+Q+VS   LITD+          A+N DD ++
Sbjct: 167 EIERLLNPIPNHIFDQLVSIGRLITDFQDGGDAAGPTAANGDDALD 212


>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
           200 kDa helicase-like [Cucumis sativus]
          Length = 2175

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 43/87 (49%), Positives = 64/87 (73%)
 Frame = -2

Query: 800 ERGFYQPSTEDTWEAYQALISIVEAQSRKNLPSAVMCGTADEVLAVLKSKNIINPWDKKR 621
           E G Y P T++T  AY+A++S+++ Q     P +++ G ADE+LAVLK+ +  NP DKK+
Sbjct: 108 EEGVYMPKTKETRAAYEAMLSVIQ-QQLGGQPLSIVSGAADEILAVLKNDSFKNP-DKKK 165

Query: 620 EIEKILNPVPHLIFNQMVSTADLITDY 540
           EIEK+LNP+P+ +F+Q+VS   LITDY
Sbjct: 166 EIEKLLNPIPNNVFDQLVSIGRLITDY 192


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
           [Cucumis sativus]
          Length = 2175

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 43/87 (49%), Positives = 64/87 (73%)
 Frame = -2

Query: 800 ERGFYQPSTEDTWEAYQALISIVEAQSRKNLPSAVMCGTADEVLAVLKSKNIINPWDKKR 621
           E G Y P T++T  AY+A++S+++ Q     P +++ G ADE+LAVLK+ +  NP DKK+
Sbjct: 108 EEGVYMPKTKETRAAYEAMLSVIQ-QQLGGQPLSIVSGAADEILAVLKNDSFKNP-DKKK 165

Query: 620 EIEKILNPVPHLIFNQMVSTADLITDY 540
           EIEK+LNP+P+ +F+Q+VS   LITDY
Sbjct: 166 EIEKLLNPIPNNVFDQLVSIGRLITDY 192


>emb|CBI36671.3| unnamed protein product [Vitis vinifera]
          Length = 1405

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 43/87 (49%), Positives = 65/87 (74%)
 Frame = -2

Query: 800 ERGFYQPSTEDTWEAYQALISIVEAQSRKNLPSAVMCGTADEVLAVLKSKNIINPWDKKR 621
           E G YQP T++T  AY+A++S+++ Q     P  ++ G ADE+LAVLK++ + NP DKK+
Sbjct: 109 EEGVYQPKTKETRAAYEAMLSVIQ-QQLGGQPLNIVSGAADEILAVLKNETVKNP-DKKK 166

Query: 620 EIEKILNPVPHLIFNQMVSTADLITDY 540
           EIE++LNP+P+ IF+Q+VS   LITD+
Sbjct: 167 EIERLLNPIPNHIFDQLVSIGRLITDF 193