BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006114
         (1406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134547.1| PREDICTED: coatomer subunit epsilon-1-like [...   472   e-131
ref|XP_002270662.1| PREDICTED: coatomer subunit epsilon-1 isofor...   464   e-128
ref|XP_002317073.1| predicted protein [Populus trichocarpa] gi|2...   462   e-128
ref|XP_002893638.1| coatomer protein epsilon subunit family prot...   453   e-125
ref|NP_174351.1| coatomer subunit epsilon-1 [Arabidopsis thalian...   452   e-125

>ref|XP_004134547.1| PREDICTED: coatomer subunit epsilon-1-like [Cucumis sativus]
           gi|449490635|ref|XP_004158662.1| PREDICTED: coatomer
           subunit epsilon-1-like [Cucumis sativus]
          Length = 289

 Score =  472 bits (1215), Expect = e-131
 Identities = 234/289 (80%), Positives = 259/289 (89%)
 Frame = +2

Query: 110 MASPDHLFNLRNNFYLGAYQAAINNSDVANLSEEDAIERDCLVYRSYIALGSYQLVINEI 289
           MA+PDHLFNLRNNFYLGAYQAAINNSD+ NLS +D IERD +V+RSYIALGSYQL I+EI
Sbjct: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60

Query: 290 DASQPTALQAVKLLALYLSSPDSKESTISSLREWLSDAAIGNNPVLKLMAGIIFMHEQDY 469
           D+S PT LQAVKLLALYLS P SKESTI+SL+EWLSD AIGNN  L+L+AGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120

Query: 470 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQIDEDHTLSQLANAWLNLAV 649
           NEALKHTNAGGTMELHALNVQIFLKMHRSDYAE+QL++MQQIDEDHTL+QLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180

Query: 650 GGSKIQEALLIFQDFSEKFTLTGLILNGKAVCCMHMGHFDEAEMXXXXXXXXXXXXXETL 829
           GGSKIQEA LIFQDFSEK+ +T LILNG+AVCCMHMG+FDEAE              ETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 830 ANLIVCNLHLGKASSRYLSQLKLSHPEHMLVKRISTAEENFDRAVQSVA 976
           ANL+VC+LHLGK +SR+LSQLK+SHP+HMLVKRISTAEENFDRAVQSVA
Sbjct: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSVA 289


>ref|XP_002270662.1| PREDICTED: coatomer subunit epsilon-1 isoform 1 [Vitis vinifera]
           gi|297740898|emb|CBI31080.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  464 bits (1195), Expect = e-128
 Identities = 232/289 (80%), Positives = 257/289 (88%)
 Frame = +2

Query: 110 MASPDHLFNLRNNFYLGAYQAAINNSDVANLSEEDAIERDCLVYRSYIALGSYQLVINEI 289
           MA+PD LF LRNNF+LGA+QAAINNSD+ NLS ED+IERDCLV+RSYIALGSYQLVINEI
Sbjct: 1   MAAPDLLFGLRNNFFLGAFQAAINNSDIPNLSPEDSIERDCLVHRSYIALGSYQLVINEI 60

Query: 290 DASQPTALQAVKLLALYLSSPDSKESTISSLREWLSDAAIGNNPVLKLMAGIIFMHEQDY 469
           D+S  T LQAVKLLALYLSSP++KESTISSL+E L D AIGNNP+L+L+AGI+FMHEQDY
Sbjct: 61  DSSAATPLQAVKLLALYLSSPENKESTISSLKELLGDPAIGNNPILRLIAGIVFMHEQDY 120

Query: 470 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQIDEDHTLSQLANAWLNLAV 649
           NEALKHT+ GGTMELHALNVQIFLKMHRSDYAEKQLKIMQQ+DEDHTL+QLANAWLNLAV
Sbjct: 121 NEALKHTHPGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQMDEDHTLTQLANAWLNLAV 180

Query: 650 GGSKIQEALLIFQDFSEKFTLTGLILNGKAVCCMHMGHFDEAEMXXXXXXXXXXXXXETL 829
           GGSKIQEA LIFQDFSEK+ +TGLILNGKAVCCMHMGHFDEAE              ETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYQMTGLILNGKAVCCMHMGHFDEAESLLLEALNKDAKDPETL 240

Query: 830 ANLIVCNLHLGKASSRYLSQLKLSHPEHMLVKRISTAEENFDRAVQSVA 976
           ANL+VC+LHLGK SSRYLSQLKLSHP+H+LV R S AEE FDRAVQ++A
Sbjct: 241 ANLVVCSLHLGKQSSRYLSQLKLSHPDHVLVTRASAAEEAFDRAVQTIA 289


>ref|XP_002317073.1| predicted protein [Populus trichocarpa] gi|222860138|gb|EEE97685.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  462 bits (1189), Expect = e-128
 Identities = 229/287 (79%), Positives = 258/287 (89%)
 Frame = +2

Query: 116 SPDHLFNLRNNFYLGAYQAAINNSDVANLSEEDAIERDCLVYRSYIALGSYQLVINEIDA 295
           +PDHLFNLRNNFYLGAYQAAIN SD+ NLS +DA+ERD LVYRSYIAL SYQLVI+EID 
Sbjct: 4   APDHLFNLRNNFYLGAYQAAINTSDLPNLSPDDAVERDSLVYRSYIALASYQLVIHEIDD 63

Query: 296 SQPTALQAVKLLALYLSSPDSKESTISSLREWLSDAAIGNNPVLKLMAGIIFMHEQDYNE 475
           +  T LQAVKLLALYLSSP++KESTISSL+EWL+D+AI NN +L+L+AGIIFMHE+DYNE
Sbjct: 64  AAATPLQAVKLLALYLSSPENKESTISSLKEWLADSAIANNAILRLIAGIIFMHEEDYNE 123

Query: 476 ALKHTNAGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQIDEDHTLSQLANAWLNLAVGG 655
           ALKHTNAGGTMELHALNVQIFLKMHRSDYAEKQL+IMQQIDEDHTL+QLA AWLNLAVGG
Sbjct: 124 ALKHTNAGGTMELHALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQLATAWLNLAVGG 183

Query: 656 SKIQEALLIFQDFSEKFTLTGLILNGKAVCCMHMGHFDEAEMXXXXXXXXXXXXXETLAN 835
           SKIQEA LIFQDFSEK+ +TGLILNGKAVCCMHMG+FDEAE              ETLAN
Sbjct: 184 SKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAETLLLEALNKDAKDPETLAN 243

Query: 836 LIVCNLHLGKASSRYLSQLKLSHPEHMLVKRISTAEENFDRAVQSVA 976
           L+VC+LH+GK+SSRYLSQLKLSHP+H+LVKR S+AE+NF+RAVQSVA
Sbjct: 244 LVVCSLHIGKSSSRYLSQLKLSHPDHVLVKRASSAEDNFERAVQSVA 290


>ref|XP_002893638.1| coatomer protein epsilon subunit family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339480|gb|EFH69897.1| coatomer
           protein epsilon subunit family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 292

 Score =  453 bits (1166), Expect = e-125
 Identities = 217/290 (74%), Positives = 260/290 (89%)
 Frame = +2

Query: 107 SMASPDHLFNLRNNFYLGAYQAAINNSDVANLSEEDAIERDCLVYRSYIALGSYQLVINE 286
           SMA PDHLFNLRN+FYLGAYQAAINNS++ NLS+ED +ERDCLV+R+YIALGSYQLVI+E
Sbjct: 3   SMAGPDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISE 62

Query: 287 IDASQPTALQAVKLLALYLSSPDSKESTISSLREWLSDAAIGNNPVLKLMAGIIFMHEQD 466
           ID +  T LQAVKLLA+YL+SP +KESTISSLREWL+D  +GNN +++L+AG IFMHE+D
Sbjct: 63  IDEAAATPLQAVKLLAMYLASPGNKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEED 122

Query: 467 YNEALKHTNAGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQIDEDHTLSQLANAWLNLA 646
           YNEALKHT++GGTM+LHALNVQIF+KMHRSDYAEKQL++MQQIDEDHTL+QLA+AWLNLA
Sbjct: 123 YNEALKHTHSGGTMDLHALNVQIFIKMHRSDYAEKQLRVMQQIDEDHTLTQLASAWLNLA 182

Query: 647 VGGSKIQEALLIFQDFSEKFTLTGLILNGKAVCCMHMGHFDEAEMXXXXXXXXXXXXXET 826
           VGGSKIQEA LIFQDFSEK+ +T LILNGKAVCCMHMG+F+EAE              ET
Sbjct: 183 VGGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPET 242

Query: 827 LANLIVCNLHLGKASSRYLSQLKLSHPEHMLVKRISTAEENFDRAVQSVA 976
           LANL+VC+LH+GK+SSRYL+QLKLSHPEH+LVKR+++AE+NF+RA+QS A
Sbjct: 243 LANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRVASAEDNFERALQSFA 292


>ref|NP_174351.1| coatomer subunit epsilon-1 [Arabidopsis thaliana]
           gi|75336896|sp|Q9SA78.1|COPE1_ARATH RecName:
           Full=Coatomer subunit epsilon-1; AltName:
           Full=Epsilon-coat protein 1; Short=Epsilon-COP 1
           gi|4587519|gb|AAD25750.1|AC007060_8 Strong similarity to
           F19I3.7 gi|3033380 putative coatomer epsilon subunit
           from Arabidopsis thaliana BAC gb|AC004238. ESTs
           gb|Z17908, gb|AA728673, gb|N96555, gb|H76335,
           gb|AA712463, gb|W43247, gb|T45611, gb|T21160, gb|T14119
           and AI100483 come from this gene [Arabidopsis thaliana]
           gi|13194794|gb|AAK15559.1|AF348588_1 putative coatomer
           protein, epsilon subunit [Arabidopsis thaliana]
           gi|13878125|gb|AAK44140.1|AF370325_1 putative coatomer
           protein, epsilon subunit [Arabidopsis thaliana]
           gi|17104797|gb|AAL34287.1| putative coatomer protein,
           epsilon subunit [Arabidopsis thaliana]
           gi|332193133|gb|AEE31254.1| coatomer subunit epsilon-1
           [Arabidopsis thaliana]
          Length = 292

 Score =  452 bits (1164), Expect = e-125
 Identities = 217/290 (74%), Positives = 260/290 (89%)
 Frame = +2

Query: 107 SMASPDHLFNLRNNFYLGAYQAAINNSDVANLSEEDAIERDCLVYRSYIALGSYQLVINE 286
           SMA PDHLFNLRN+FYLGAYQAAINNS++ NLS+ED +ERDCLV+R+YIALGSYQLVI+E
Sbjct: 3   SMAGPDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISE 62

Query: 287 IDASQPTALQAVKLLALYLSSPDSKESTISSLREWLSDAAIGNNPVLKLMAGIIFMHEQD 466
           ID +  T LQAVKLLA+YLSSP++KESTISSLREWL+D  +GNN +++L+AG IFMHE+D
Sbjct: 63  IDEAAATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEED 122

Query: 467 YNEALKHTNAGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQIDEDHTLSQLANAWLNLA 646
           YNEALKHT++GGTM+LHALNVQIF+KMHRSD+AEKQL++MQQIDEDHTL+QLA+AWLNLA
Sbjct: 123 YNEALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLA 182

Query: 647 VGGSKIQEALLIFQDFSEKFTLTGLILNGKAVCCMHMGHFDEAEMXXXXXXXXXXXXXET 826
           VGGSKIQEA LIFQDFSEK+ +T LILNGKAVCCMHMG+F+EAE              ET
Sbjct: 183 VGGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPET 242

Query: 827 LANLIVCNLHLGKASSRYLSQLKLSHPEHMLVKRISTAEENFDRAVQSVA 976
           LANL+VC+LH+GK+SSRYL+QLKLSHPEH+LVKR ++AE+NF+RA+QS A
Sbjct: 243 LANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQSFA 292