BLASTX nr result
ID: Cimicifuga21_contig00006113
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00006113 (1276 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002466284.1| hypothetical protein SORBIDRAFT_01g005010 [S... 100 6e-19 ref|XP_001764980.1| predicted protein [Physcomitrella patens sub... 100 1e-18 ref|XP_001758575.1| histone H1 linker [Physcomitrella patens sub... 100 1e-18 ref|XP_001757287.1| histone H1 linker [Physcomitrella patens sub... 99 2e-18 ref|XP_002531272.1| histone h1/h5, putative [Ricinus communis] g... 98 5e-18 >ref|XP_002466284.1| hypothetical protein SORBIDRAFT_01g005010 [Sorghum bicolor] gi|241920138|gb|EER93282.1| hypothetical protein SORBIDRAFT_01g005010 [Sorghum bicolor] Length = 281 Score = 100 bits (250), Expect = 6e-19 Identities = 49/68 (72%), Positives = 59/68 (86%) Frame = +1 Query: 307 HPSYLEMITDAITTLKERTGSSQFAITKFLEDKYKTKLAPNFKKLLLVQLRNNVASGKLI 486 HP Y EMI++AIT+LKERTGSSQ+AI KF+EDK+K KL PNF+KLLLVQL+ VA+GKL Sbjct: 50 HPPYAEMISEAITSLKERTGSSQYAIAKFVEDKHKDKLPPNFRKLLLVQLKKLVAAGKLT 109 Query: 487 KVKGSFKL 510 KVK S+KL Sbjct: 110 KVKNSYKL 117 >ref|XP_001764980.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683789|gb|EDQ70196.1| predicted protein [Physcomitrella patens subsp. patens] Length = 292 Score = 100 bits (248), Expect = 1e-18 Identities = 49/68 (72%), Positives = 55/68 (80%) Frame = +1 Query: 307 HPSYLEMITDAITTLKERTGSSQFAITKFLEDKYKTKLAPNFKKLLLVQLRNNVASGKLI 486 HPSYL M+ +AI LKERTGSSQ+AI K+LEDKYKT L PNFKK L +QLRN SGKL+ Sbjct: 60 HPSYLLMVVEAIGALKERTGSSQYAIAKYLEDKYKTGLPPNFKKTLTIQLRNLTKSGKLV 119 Query: 487 KVKGSFKL 510 KVK SFKL Sbjct: 120 KVKNSFKL 127 >ref|XP_001758575.1| histone H1 linker [Physcomitrella patens subsp. patens] gi|162690185|gb|EDQ76553.1| histone H1 linker [Physcomitrella patens subsp. patens] Length = 265 Score = 99.8 bits (247), Expect = 1e-18 Identities = 47/68 (69%), Positives = 56/68 (82%) Frame = +1 Query: 307 HPSYLEMITDAITTLKERTGSSQFAITKFLEDKYKTKLAPNFKKLLLVQLRNNVASGKLI 486 HP+Y+ M+ +AI LKERTGSSQ+AI K+LEDKYKT LAPNFKK+L +QLRN GKL+ Sbjct: 71 HPTYMLMVVEAIGALKERTGSSQYAIAKYLEDKYKTGLAPNFKKMLTIQLRNLTKGGKLV 130 Query: 487 KVKGSFKL 510 KVK SFKL Sbjct: 131 KVKNSFKL 138 >ref|XP_001757287.1| histone H1 linker [Physcomitrella patens subsp. patens] gi|162691410|gb|EDQ77772.1| histone H1 linker [Physcomitrella patens subsp. patens] Length = 285 Score = 99.0 bits (245), Expect = 2e-18 Identities = 48/68 (70%), Positives = 55/68 (80%) Frame = +1 Query: 307 HPSYLEMITDAITTLKERTGSSQFAITKFLEDKYKTKLAPNFKKLLLVQLRNNVASGKLI 486 HP+YL M T+AI LKERTGSSQ+AI K+LEDKYKT L PNFKK+L QLRN +GKL+ Sbjct: 75 HPTYLLMATEAIAALKERTGSSQYAIAKYLEDKYKTGLPPNFKKMLTTQLRNLTKAGKLV 134 Query: 487 KVKGSFKL 510 KVK SFKL Sbjct: 135 KVKNSFKL 142 >ref|XP_002531272.1| histone h1/h5, putative [Ricinus communis] gi|223529105|gb|EEF31085.1| histone h1/h5, putative [Ricinus communis] Length = 232 Score = 97.8 bits (242), Expect = 5e-18 Identities = 50/68 (73%), Positives = 59/68 (86%) Frame = +1 Query: 307 HPSYLEMITDAITTLKERTGSSQFAITKFLEDKYKTKLAPNFKKLLLVQLRNNVASGKLI 486 +PS+LEMI DAI TLKERTGSSQ+AITKF+E+K+K KL PNF+KLLL L+ VASGKL+ Sbjct: 52 YPSFLEMINDAIVTLKERTGSSQYAITKFVEEKHK-KLPPNFRKLLLFHLKKLVASGKLV 110 Query: 487 KVKGSFKL 510 KVK SFKL Sbjct: 111 KVKNSFKL 118