BLASTX nr result

ID: Cimicifuga21_contig00006113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006113
         (1276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466284.1| hypothetical protein SORBIDRAFT_01g005010 [S...   100   6e-19
ref|XP_001764980.1| predicted protein [Physcomitrella patens sub...   100   1e-18
ref|XP_001758575.1| histone H1 linker [Physcomitrella patens sub...   100   1e-18
ref|XP_001757287.1| histone H1 linker [Physcomitrella patens sub...    99   2e-18
ref|XP_002531272.1| histone h1/h5, putative [Ricinus communis] g...    98   5e-18

>ref|XP_002466284.1| hypothetical protein SORBIDRAFT_01g005010 [Sorghum bicolor]
           gi|241920138|gb|EER93282.1| hypothetical protein
           SORBIDRAFT_01g005010 [Sorghum bicolor]
          Length = 281

 Score =  100 bits (250), Expect = 6e-19
 Identities = 49/68 (72%), Positives = 59/68 (86%)
 Frame = +1

Query: 307 HPSYLEMITDAITTLKERTGSSQFAITKFLEDKYKTKLAPNFKKLLLVQLRNNVASGKLI 486
           HP Y EMI++AIT+LKERTGSSQ+AI KF+EDK+K KL PNF+KLLLVQL+  VA+GKL 
Sbjct: 50  HPPYAEMISEAITSLKERTGSSQYAIAKFVEDKHKDKLPPNFRKLLLVQLKKLVAAGKLT 109

Query: 487 KVKGSFKL 510
           KVK S+KL
Sbjct: 110 KVKNSYKL 117


>ref|XP_001764980.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162683789|gb|EDQ70196.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 292

 Score =  100 bits (248), Expect = 1e-18
 Identities = 49/68 (72%), Positives = 55/68 (80%)
 Frame = +1

Query: 307 HPSYLEMITDAITTLKERTGSSQFAITKFLEDKYKTKLAPNFKKLLLVQLRNNVASGKLI 486
           HPSYL M+ +AI  LKERTGSSQ+AI K+LEDKYKT L PNFKK L +QLRN   SGKL+
Sbjct: 60  HPSYLLMVVEAIGALKERTGSSQYAIAKYLEDKYKTGLPPNFKKTLTIQLRNLTKSGKLV 119

Query: 487 KVKGSFKL 510
           KVK SFKL
Sbjct: 120 KVKNSFKL 127


>ref|XP_001758575.1| histone H1 linker [Physcomitrella patens subsp. patens]
           gi|162690185|gb|EDQ76553.1| histone H1 linker
           [Physcomitrella patens subsp. patens]
          Length = 265

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 47/68 (69%), Positives = 56/68 (82%)
 Frame = +1

Query: 307 HPSYLEMITDAITTLKERTGSSQFAITKFLEDKYKTKLAPNFKKLLLVQLRNNVASGKLI 486
           HP+Y+ M+ +AI  LKERTGSSQ+AI K+LEDKYKT LAPNFKK+L +QLRN    GKL+
Sbjct: 71  HPTYMLMVVEAIGALKERTGSSQYAIAKYLEDKYKTGLAPNFKKMLTIQLRNLTKGGKLV 130

Query: 487 KVKGSFKL 510
           KVK SFKL
Sbjct: 131 KVKNSFKL 138


>ref|XP_001757287.1| histone H1 linker [Physcomitrella patens subsp. patens]
           gi|162691410|gb|EDQ77772.1| histone H1 linker
           [Physcomitrella patens subsp. patens]
          Length = 285

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 48/68 (70%), Positives = 55/68 (80%)
 Frame = +1

Query: 307 HPSYLEMITDAITTLKERTGSSQFAITKFLEDKYKTKLAPNFKKLLLVQLRNNVASGKLI 486
           HP+YL M T+AI  LKERTGSSQ+AI K+LEDKYKT L PNFKK+L  QLRN   +GKL+
Sbjct: 75  HPTYLLMATEAIAALKERTGSSQYAIAKYLEDKYKTGLPPNFKKMLTTQLRNLTKAGKLV 134

Query: 487 KVKGSFKL 510
           KVK SFKL
Sbjct: 135 KVKNSFKL 142


>ref|XP_002531272.1| histone h1/h5, putative [Ricinus communis]
           gi|223529105|gb|EEF31085.1| histone h1/h5, putative
           [Ricinus communis]
          Length = 232

 Score = 97.8 bits (242), Expect = 5e-18
 Identities = 50/68 (73%), Positives = 59/68 (86%)
 Frame = +1

Query: 307 HPSYLEMITDAITTLKERTGSSQFAITKFLEDKYKTKLAPNFKKLLLVQLRNNVASGKLI 486
           +PS+LEMI DAI TLKERTGSSQ+AITKF+E+K+K KL PNF+KLLL  L+  VASGKL+
Sbjct: 52  YPSFLEMINDAIVTLKERTGSSQYAITKFVEEKHK-KLPPNFRKLLLFHLKKLVASGKLV 110

Query: 487 KVKGSFKL 510
           KVK SFKL
Sbjct: 111 KVKNSFKL 118


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