BLASTX nr result

ID: Cimicifuga21_contig00006095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006095
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinif...   186   2e-45
emb|CBI29966.3| unnamed protein product [Vitis vinifera]              186   2e-45
ref|XP_004161672.1| PREDICTED: LOW QUALITY PROTEIN: protein RRP5...   175   4e-42
ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sat...   175   4e-42
ref|XP_003518021.1| PREDICTED: protein RRP5 homolog [Glycine max]     165   3e-39

>ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinifera]
          Length = 1879

 Score =  186 bits (472), Expect = 2e-45
 Identities = 93/134 (69%), Positives = 105/134 (78%)
 Frame = +1

Query: 1   NVSPGMKLWGVIAEVNEKDLVLSLPGGLRGLVRASEASDFIAENEIKDSEHNFLSSIFHV 180
           N+SPGMKLWGV+AEVNEKDL +SLPGGLRGLVRASEA D +  NEIKD+E  FL  IFH+
Sbjct: 127 NISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRASEAFDPLFSNEIKDAEGIFLPRIFHI 186

Query: 181 GQLASCIVVQVDDDKSEKKGKRKIWXXXXXXXXXXXXXXDAVQEGMVLTTYVKSIEDHGY 360
           GQL SC+V+Q+DDDK E KGKR+IW              DA+QEGMVLT YVKSIEDHGY
Sbjct: 187 GQLVSCVVLQLDDDKKE-KGKRRIWLSLRLSLLHKGFTLDALQEGMVLTAYVKSIEDHGY 245

Query: 361 ILHFGLSSISGFLP 402
           ILHFGL S +GFLP
Sbjct: 246 ILHFGLPSFTGFLP 259


>emb|CBI29966.3| unnamed protein product [Vitis vinifera]
          Length = 1862

 Score =  186 bits (472), Expect = 2e-45
 Identities = 93/134 (69%), Positives = 105/134 (78%)
 Frame = +1

Query: 1   NVSPGMKLWGVIAEVNEKDLVLSLPGGLRGLVRASEASDFIAENEIKDSEHNFLSSIFHV 180
           N+SPGMKLWGV+AEVNEKDL +SLPGGLRGLVRASEA D +  NEIKD+E  FL  IFH+
Sbjct: 127 NISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRASEAFDPLFSNEIKDAEGIFLPRIFHI 186

Query: 181 GQLASCIVVQVDDDKSEKKGKRKIWXXXXXXXXXXXXXXDAVQEGMVLTTYVKSIEDHGY 360
           GQL SC+V+Q+DDDK E KGKR+IW              DA+QEGMVLT YVKSIEDHGY
Sbjct: 187 GQLVSCVVLQLDDDKKE-KGKRRIWLSLRLSLLHKGFTLDALQEGMVLTAYVKSIEDHGY 245

Query: 361 ILHFGLSSISGFLP 402
           ILHFGL S +GFLP
Sbjct: 246 ILHFGLPSFTGFLP 259


>ref|XP_004161672.1| PREDICTED: LOW QUALITY PROTEIN: protein RRP5 homolog [Cucumis
           sativus]
          Length = 609

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/134 (63%), Positives = 103/134 (76%)
 Frame = +1

Query: 1   NVSPGMKLWGVIAEVNEKDLVLSLPGGLRGLVRASEASDFIAENEIKDSEHNFLSSIFHV 180
           N++P MK WGV+AEVN+KDLV+SLPGGLRGLV A+EA D I E E++D+EH+ L  +FHV
Sbjct: 120 NINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAAEAFDPILEKEVEDTEHDLLPVMFHV 179

Query: 181 GQLASCIVVQVDDDKSEKKGKRKIWXXXXXXXXXXXXXXDAVQEGMVLTTYVKSIEDHGY 360
           GQL  C+V++VDDDK E  GKRKIW              D +QEGMVLT+YVKSIEDHGY
Sbjct: 180 GQLVPCVVLKVDDDKKE-SGKRKIWLSLRLSILYKDFTLDLLQEGMVLTSYVKSIEDHGY 238

Query: 361 ILHFGLSSISGFLP 402
           ILHFGL+S +GFLP
Sbjct: 239 ILHFGLTSFTGFLP 252


>ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sativus]
          Length = 1898

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/134 (63%), Positives = 103/134 (76%)
 Frame = +1

Query: 1   NVSPGMKLWGVIAEVNEKDLVLSLPGGLRGLVRASEASDFIAENEIKDSEHNFLSSIFHV 180
           N++P MK WGV+AEVN+KDLV+SLPGGLRGLV A+EA D I E E++D+EH+ L  +FHV
Sbjct: 120 NINPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAAEAFDPILEKEVEDTEHDLLPVMFHV 179

Query: 181 GQLASCIVVQVDDDKSEKKGKRKIWXXXXXXXXXXXXXXDAVQEGMVLTTYVKSIEDHGY 360
           GQL  C+V++VDDDK E  GKRKIW              D +QEGMVLT+YVKSIEDHGY
Sbjct: 180 GQLVPCVVLKVDDDKKE-SGKRKIWLSLRLSMLYKDFTLDLLQEGMVLTSYVKSIEDHGY 238

Query: 361 ILHFGLSSISGFLP 402
           ILHFGL+S +GFLP
Sbjct: 239 ILHFGLTSFTGFLP 252


>ref|XP_003518021.1| PREDICTED: protein RRP5 homolog [Glycine max]
          Length = 2174

 Score =  165 bits (418), Expect = 3e-39
 Identities = 86/134 (64%), Positives = 100/134 (74%)
 Frame = +1

Query: 1   NVSPGMKLWGVIAEVNEKDLVLSLPGGLRGLVRASEASDFIAENEIKDSEHNFLSSIFHV 180
           N++PGMKLWGV+AEVNEKDLV+SLPGGLRGLV AS+A D I +++I+  E  FLS +F V
Sbjct: 263 NITPGMKLWGVVAEVNEKDLVVSLPGGLRGLVHASDAVDPIFDDKIEVGEI-FLSGVFCV 321

Query: 181 GQLASCIVVQVDDDKSEKKGKRKIWXXXXXXXXXXXXXXDAVQEGMVLTTYVKSIEDHGY 360
           GQL SC+V+++DDDK EK G RKIW              D VQEGMVL  YVKSIEDHGY
Sbjct: 322 GQLVSCVVLRLDDDKKEK-GSRKIWLSLRLSLLHKNYNLDVVQEGMVLAAYVKSIEDHGY 380

Query: 361 ILHFGLSSISGFLP 402
           ILHFGL S  GFLP
Sbjct: 381 ILHFGLPSFLGFLP 394


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