BLASTX nr result

ID: Cimicifuga21_contig00006083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006083
         (1159 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275929.2| PREDICTED: uncharacterized deoxyribonuclease...   409   e-112
ref|XP_002319763.1| predicted protein [Populus trichocarpa] gi|2...   404   e-110
ref|XP_002871773.1| hypothetical protein ARALYDRAFT_326186 [Arab...   388   e-105
ref|NP_568352.1| TatD related DNase [Arabidopsis thaliana] gi|12...   384   e-104
emb|CBI40042.3| unnamed protein product [Vitis vinifera]              380   e-103

>ref|XP_002275929.2| PREDICTED: uncharacterized deoxyribonuclease YabD-like [Vitis
           vinifera]
          Length = 314

 Score =  409 bits (1052), Expect = e-112
 Identities = 203/308 (65%), Positives = 235/308 (76%), Gaps = 33/308 (10%)
 Frame = +1

Query: 160 KLFDAHCHLQDPRIYQVAPQLIRTALDFGVLRFAVNGVSEKDWHVVKQMGEEYPCIIPCF 339
           KLFD+HCHLQDPRI  +APQLI TAL+ G+  FAVNGVSE DWH+VKQM + Y C++PCF
Sbjct: 6   KLFDSHCHLQDPRILNMAPQLIETALNSGIRHFAVNGVSENDWHLVKQMSDTYQCVVPCF 65

Query: 340 GLHPWYVAERTPNWFNTLKEFFDSTPSATVGEIGLDKGSHGKKIDFSDQVHVFRQQLELA 519
           GLHPWYVAERTP WFNTLK+FF +TP+ATVGEIGLDKGS G++I+F +QV VF+QQLELA
Sbjct: 66  GLHPWYVAERTPFWFNTLKDFFHATPAATVGEIGLDKGSRGREINFVNQVEVFQQQLELA 125

Query: 520 KELQRPVSIHCVRAFGDLLEIMQSVGPLPGGAILHSYLGSAEMVPPLVKLGAYFSFSGFT 699
           KEL+RPVS+HCVRAFGDLL+IMQ VGP P G ILHSYLGSAEMVP   KLGAYFSFSG+ 
Sbjct: 126 KELKRPVSVHCVRAFGDLLQIMQHVGPFPAGVILHSYLGSAEMVPEFAKLGAYFSFSGYL 185

Query: 700 MSMKTQKAKKMLKAVPTERILLESDSPDALPNGDLDSLQWVPEDA--------------- 834
           MSMK QKAKKML+ +P ERILLESD+PDALP  DLDSL WV  D+               
Sbjct: 186 MSMKEQKAKKMLRTIPVERILLESDAPDALPKSDLDSLFWVERDSYASKELQTKDINPAS 245

Query: 835 ------------------SKTLNQPANIHNVLGYVASLLEMPEAELAEISYRNALRLFSC 960
                              +TLN PANIH+VL YVASLLEM + ELAEISYRNA+RLFS 
Sbjct: 246 SSGNLSDNPAARNKSVLPQETLNHPANIHSVLLYVASLLEMSKEELAEISYRNAVRLFSF 305

Query: 961 QDMEVNEE 984
           +  +++ E
Sbjct: 306 EGSKISLE 313


>ref|XP_002319763.1| predicted protein [Populus trichocarpa] gi|222858139|gb|EEE95686.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  404 bits (1037), Expect = e-110
 Identities = 207/305 (67%), Positives = 234/305 (76%), Gaps = 30/305 (9%)
 Frame = +1

Query: 160 KLFDAHCHLQDPRIYQVAPQLIRTALDFGVLRFAVNGVSEKDWHVVKQMGEEYPCIIPCF 339
           KLFDAHCHLQDPRI    PQLI TALD GV+RFAVNGVSEKDW++VK+MGE YP +IPCF
Sbjct: 4   KLFDAHCHLQDPRILNKTPQLIATALDTGVVRFAVNGVSEKDWNLVKEMGESYPSVIPCF 63

Query: 340 GLHPWYVAERTPNWFNTLKEFFDSTPSATVGEIGLDKGSHGKKIDFSDQVHVFRQQLELA 519
           GLHPW++ ERTPNWFNTLKEFF  TPSA VGEIGLDKGSHGKKIDF+DQV VFR+QLELA
Sbjct: 64  GLHPWFIEERTPNWFNTLKEFFQITPSAAVGEIGLDKGSHGKKIDFNDQVQVFRRQLELA 123

Query: 520 KELQRPVSIHCVRAFGDLLEIMQSVGPLPGGAILHSYLGSAEMVPPLVKLGAYFSFSGFT 699
           KEL RPVS+HCV AFGDLLEIM+S GP P G ILHS+LGSAEMVP   KLGAYFSFSGF 
Sbjct: 124 KELNRPVSVHCVHAFGDLLEIMKSTGPFPAGVILHSFLGSAEMVPEFAKLGAYFSFSGFL 183

Query: 700 MSMKTQKAKKMLKAVPTERILLESDSPDALPNGDLDSLQWV------PE----------- 828
           MSMK +KA KMLKAV ++RILLE+D+PDALPNG   SL  V      PE           
Sbjct: 184 MSMKKEKATKMLKAVSSDRILLETDAPDALPNGKFGSLFLVDGGIFHPEGENSSSNADSL 243

Query: 829 ---------DAS----KTLNQPANIHNVLGYVASLLEMPEAELAEISYRNALRLFSCQDM 969
                    DAS    +T N PANIHNVL YVASLL++ + ELAE+SY NA+RLFS +  
Sbjct: 244 HDGDSHPSKDASALPRETPNHPANIHNVLSYVASLLDITKQELAELSYANAVRLFSYEGS 303

Query: 970 EVNEE 984
           ++ E+
Sbjct: 304 KLLEK 308


>ref|XP_002871773.1| hypothetical protein ARALYDRAFT_326186 [Arabidopsis lyrata subsp.
           lyrata] gi|297317610|gb|EFH48032.1| hypothetical protein
           ARALYDRAFT_326186 [Arabidopsis lyrata subsp. lyrata]
          Length = 325

 Score =  388 bits (996), Expect = e-105
 Identities = 194/296 (65%), Positives = 225/296 (76%), Gaps = 30/296 (10%)
 Frame = +1

Query: 160 KLFDAHCHLQDPRIYQVAPQLIRTALDFGVLRFAVNGVSEKDWHVVKQMGEEYPCIIPCF 339
           KLFDAHCHLQDPRI   APQLI +A+  GV  FAVNGVSEKDW++VK+MG +YP ++PCF
Sbjct: 2   KLFDAHCHLQDPRIITKAPQLISSAVASGVSAFAVNGVSEKDWNLVKEMGAKYPSVVPCF 61

Query: 340 GLHPWYVAERTPNWFNTLKEFFDSTPSATVGEIGLDKGSHGKKIDFSDQVHVFRQQLELA 519
           G+HPWYVAER+P WF TLK FF++TP+A VGEIGLDKGS G++IDFSDQV VFRQQLELA
Sbjct: 62  GIHPWYVAERSPQWFETLKSFFETTPTAAVGEIGLDKGSKGREIDFSDQVTVFRQQLELA 121

Query: 520 KELQRPVSIHCVRAFGDLLEIMQSVGPLPGGAILHSYLGSAEMVPPLVKLGAYFSFSGFT 699
           KEL RP S+HCVRAFGDLLEI++SVGP P G +LHSYLGSAE+VP   KLGAYFSFSGF 
Sbjct: 122 KELNRPASVHCVRAFGDLLEILKSVGPFPSGVMLHSYLGSAEIVPEFAKLGAYFSFSGFL 181

Query: 700 MSMKTQKAKKMLKAVPTERILLESDSPDALPNGDLDSLQWVPEDAS-------------- 837
           MSM  +KAKKMLKAVP++RILLE+DSPDALP  +  SL +V  D S              
Sbjct: 182 MSMSEKKAKKMLKAVPSDRILLETDSPDALPKAESGSLYFVDGDPSLPEEGNSAQDLDSA 241

Query: 838 ----------------KTLNQPANIHNVLGYVASLLEMPEAELAEISYRNALRLFS 957
                           +TLN PANIH VLGYVA LL+M   ELAE+SY+NA+RLFS
Sbjct: 242 SNDKSNVSSDSTKLPKETLNHPANIHMVLGYVARLLDMKNEELAELSYQNAVRLFS 297


>ref|NP_568352.1| TatD related DNase [Arabidopsis thaliana]
           gi|124301002|gb|ABN04753.1| At5g17570 [Arabidopsis
           thaliana] gi|332005061|gb|AED92444.1| TatD related DNase
           [Arabidopsis thaliana]
          Length = 325

 Score =  384 bits (987), Expect = e-104
 Identities = 191/302 (63%), Positives = 227/302 (75%), Gaps = 30/302 (9%)
 Frame = +1

Query: 160 KLFDAHCHLQDPRIYQVAPQLIRTALDFGVLRFAVNGVSEKDWHVVKQMGEEYPCIIPCF 339
           KLFDAHCHLQDPRI   APQ+I +A+  GV  FAVNGVSEKDW +VK+MG +YP ++PCF
Sbjct: 2   KLFDAHCHLQDPRIITKAPQIISSAVASGVSAFAVNGVSEKDWSLVKEMGAKYPSVVPCF 61

Query: 340 GLHPWYVAERTPNWFNTLKEFFDSTPSATVGEIGLDKGSHGKKIDFSDQVHVFRQQLELA 519
           G+HPWYVAER+P WF TLK FF++TP+A VGEIGLDKGS G++IDFS+QV VFRQQLELA
Sbjct: 62  GIHPWYVAERSPQWFETLKSFFETTPTAAVGEIGLDKGSKGREIDFSEQVTVFRQQLELA 121

Query: 520 KELQRPVSIHCVRAFGDLLEIMQSVGPLPGGAILHSYLGSAEMVPPLVKLGAYFSFSGFT 699
           KEL++P S+HCVRAFGDLLEI++SVGP P G +LHSYLGSAEMVP   KLGAYFSFSGF 
Sbjct: 122 KELKKPASVHCVRAFGDLLEILKSVGPFPSGVMLHSYLGSAEMVPEFAKLGAYFSFSGFL 181

Query: 700 MSMKTQKAKKMLKAVPTERILLESDSPDALPNGDLDSLQWVPEDAS-------------- 837
           MSM  +KAKKMLKAVP++RILLE+DSPDALP  +   L +V  D S              
Sbjct: 182 MSMSEKKAKKMLKAVPSDRILLETDSPDALPKAESGCLYFVDGDPSLPEEGNSAQDLDSA 241

Query: 838 ----------------KTLNQPANIHNVLGYVASLLEMPEAELAEISYRNALRLFSCQDM 969
                           +TLN PANIH VLGYVA LL+M   ELAE+SY+NA+RLFS +  
Sbjct: 242 SYDKPNVSSDSMKLTKETLNHPANIHIVLGYVAQLLDMKNEELAELSYQNAVRLFSYEGS 301

Query: 970 EV 975
           ++
Sbjct: 302 KI 303


>emb|CBI40042.3| unnamed protein product [Vitis vinifera]
          Length = 293

 Score =  380 bits (975), Expect = e-103
 Identities = 190/292 (65%), Positives = 221/292 (75%), Gaps = 33/292 (11%)
 Frame = +1

Query: 208 VAPQLIRTALDFGVLRFAVNGVSEKDWHVVKQMGEEYPCIIPCFGLHPWYVAERTPNWFN 387
           +APQLI TAL+ G+  FAVNGVSE DWH+VKQM + Y C++PCFGLHPWYVAERTP WFN
Sbjct: 1   MAPQLIETALNSGIRHFAVNGVSENDWHLVKQMSDTYQCVVPCFGLHPWYVAERTPFWFN 60

Query: 388 TLKEFFDSTPSATVGEIGLDKGSHGKKIDFSDQVHVFRQQLELAKELQRPVSIHCVRAFG 567
           TLK+FF +TP+ATVGEIGLDKGS G++I+F +QV VF+QQLELAKEL+RPVS+HCVRAFG
Sbjct: 61  TLKDFFHATPAATVGEIGLDKGSRGREINFVNQVEVFQQQLELAKELKRPVSVHCVRAFG 120

Query: 568 DLLEIMQSVGPLPGGAILHSYLGSAEMVPPLVKLGAYFSFSGFTMSMKTQKAKKMLKAVP 747
           DLL+IMQ VGP P G ILHSYLGSAEMVP   KLGAYFSFSG+ MSMK QKAKKML+ +P
Sbjct: 121 DLLQIMQHVGPFPAGVILHSYLGSAEMVPEFAKLGAYFSFSGYLMSMKEQKAKKMLRTIP 180

Query: 748 TERILLESDSPDALPNGDLDSLQWVPEDA------------------------------- 834
            ERILLESD+PDALP  DLDSL WV  D+                               
Sbjct: 181 VERILLESDAPDALPKSDLDSLFWVERDSYASKELQTKDINPASSSGNLSDNPAARNKSV 240

Query: 835 --SKTLNQPANIHNVLGYVASLLEMPEAELAEISYRNALRLFSCQDMEVNEE 984
              +TLN PANIH+VL YVASLLEM + ELAEISYRNA+RLFS +  +++ E
Sbjct: 241 LPQETLNHPANIHSVLLYVASLLEMSKEELAEISYRNAVRLFSFEGSKISLE 292


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